RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
PPFIA2-226ENST00000552020 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-226ENST00000552020 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
PPFIA2-226ENST00000552020 MIER1Q8N108 512 aa11.77□□□□□ -0.53
PPFIA2-226ENST00000552020 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
PPFIA2-226ENST00000552020 NBR1Q14596 966 aa11.74□□□□□ -0.53
PPFIA2-226ENST00000552020 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
PPFIA2-226ENST00000552020 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
PPFIA2-226ENST00000552020 EVX2Q03828 476 aa11.69□□□□□ -0.54
PPFIA2-226ENST00000552020 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
PPFIA2-226ENST00000552020 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
PPFIA2-226ENST00000552020 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
PPFIA2-226ENST00000552020 C19orf67A6NJJ6 358 aa11.58□□□□□ -0.56
PPFIA2-226ENST00000552020 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
PPFIA2-226ENST00000552020 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
PPFIA2-226ENST00000552020 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
PPFIA2-226ENST00000552020 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
PPFIA2-226ENST00000552020 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
PPFIA2-226ENST00000552020 GABBR2O75899 941 aa11.47□□□□□ -0.57
PPFIA2-226ENST00000552020 GSE1Q14687 1217 aa11.45□□□□□ -0.58
PPFIA2-226ENST00000552020 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
PPFIA2-226ENST00000552020 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
PPFIA2-226ENST00000552020 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-226ENST00000552020 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
PPFIA2-226ENST00000552020 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-226ENST00000552020 RIOK3O14730 519 aaKnown RBP11.38□□□□□ -0.59
PPFIA2-226ENST00000552020 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
PPFIA2-226ENST00000552020 STK25O00506 426 aa11.36□□□□□ -0.59
PPFIA2-226ENST00000552020 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
PPFIA2-226ENST00000552020 NUBP1P53384 320 aa11.3□□□□□ -0.6
PPFIA2-226ENST00000552020 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
PPFIA2-226ENST00000552020 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
PPFIA2-226ENST00000552020 CLCN6P51797 869 aa11.27□□□□□ -0.61
PPFIA2-226ENST00000552020 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.61
PPFIA2-226ENST00000552020 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
PPFIA2-226ENST00000552020 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
PPFIA2-226ENST00000552020 LHX8Q68G74 356 aa11.25□□□□□ -0.61
PPFIA2-226ENST00000552020 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
PPFIA2-226ENST00000552020 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
PPFIA2-226ENST00000552020 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
PPFIA2-226ENST00000552020 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
PPFIA2-226ENST00000552020 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-226ENST00000552020 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
PPFIA2-226ENST00000552020 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
PPFIA2-226ENST00000552020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.19□□□□□ -0.62
PPFIA2-226ENST00000552020 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
PPFIA2-226ENST00000552020 ZFP91Q96JP5 570 aaPredicted RBP11.19□□□□□ -0.62
PPFIA2-226ENST00000552020 ARXQ96QS3 562 aa11.18□□□□□ -0.62
PPFIA2-226ENST00000552020 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
PPFIA2-226ENST00000552020 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
PPFIA2-226ENST00000552020 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
PPFIA2-226ENST00000552020 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
PPFIA2-226ENST00000552020 PYGBP11216 843 aa11.11□□□□□ -0.63
PPFIA2-226ENST00000552020 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
PPFIA2-226ENST00000552020 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
PPFIA2-226ENST00000552020 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
PPFIA2-226ENST00000552020 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-226ENST00000552020 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
PPFIA2-226ENST00000552020 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
PPFIA2-226ENST00000552020 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PPFIA2-226ENST00000552020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
PPFIA2-226ENST00000552020 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
PPFIA2-226ENST00000552020 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
PPFIA2-226ENST00000552020 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
PPFIA2-226ENST00000552020 NISCHQ9Y2I1 1504 aa10.99□□□□□ -0.65
PPFIA2-226ENST00000552020 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
PPFIA2-226ENST00000552020 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
PPFIA2-226ENST00000552020 NEUROD2Q15784 382 aa10.94□□□□□ -0.66
PPFIA2-226ENST00000552020 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
PPFIA2-226ENST00000552020 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
PPFIA2-226ENST00000552020 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-226ENST00000552020 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-226ENST00000552020 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-226ENST00000552020 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
PPFIA2-226ENST00000552020 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
PPFIA2-226ENST00000552020 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
PPFIA2-226ENST00000552020 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
PPFIA2-226ENST00000552020 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
PPFIA2-226ENST00000552020 E2F4Q16254 413 aa10.83□□□□□ -0.68
PPFIA2-226ENST00000552020 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
PPFIA2-226ENST00000552020 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
PPFIA2-226ENST00000552020 SEMA3EO15041 775 aa10.82□□□□□ -0.68
PPFIA2-226ENST00000552020 ASTLQ6HA08 431 aaPredicted RBP10.82□□□□□ -0.68
PPFIA2-226ENST00000552020 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
PPFIA2-226ENST00000552020 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
PPFIA2-226ENST00000552020 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
PPFIA2-226ENST00000552020 PSEN1P49768 467 aa10.8□□□□□ -0.68
PPFIA2-226ENST00000552020 SLC39A7Q92504 469 aa10.8□□□□□ -0.68
PPFIA2-226ENST00000552020 OTUD5Q96G74 571 aa10.8□□□□□ -0.68
PPFIA2-226ENST00000552020 C7P10643 843 aa10.79□□□□□ -0.68
PPFIA2-226ENST00000552020 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
PPFIA2-226ENST00000552020 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
PPFIA2-226ENST00000552020 ABCC9O60706 1549 aa10.78□□□□□ -0.68
PPFIA2-226ENST00000552020 PPP1R37O75864 691 aa10.76□□□□□ -0.69
PPFIA2-226ENST00000552020 MAP3K13O43283 966 aa10.74□□□□□ -0.69
PPFIA2-226ENST00000552020 ATN1P54259 1190 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-226ENST00000552020 NLRP6P59044 892 aa10.73□□□□□ -0.69
PPFIA2-226ENST00000552020 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
PPFIA2-226ENST00000552020 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
PPFIA2-226ENST00000552020 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms