RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.7
APAF1-210ENST00000551964 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
APAF1-210ENST00000551964 IRX6P78412 446 aaPredicted RBP25.62■■□□□ 1.69
APAF1-210ENST00000551964 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
APAF1-210ENST00000551964 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
APAF1-210ENST00000551964 NBR1Q14596 966 aa25.6■■□□□ 1.69
APAF1-210ENST00000551964 EIF5BO60841 1220 aaKnown RBP25.6■■□□□ 1.69
APAF1-210ENST00000551964 PLEKHD1A6NEE1 506 aa25.58■■□□□ 1.69
APAF1-210ENST00000551964 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
APAF1-210ENST00000551964 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
APAF1-210ENST00000551964 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
APAF1-210ENST00000551964 KCNH8Q96L42 1107 aa25.5■■□□□ 1.67
APAF1-210ENST00000551964 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
APAF1-210ENST00000551964 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
APAF1-210ENST00000551964 RGL3Q3MIN7 710 aa25.44■■□□□ 1.66
APAF1-210ENST00000551964 CFDP1Q9UEE9 299 aaPredicted RBP25.44■■□□□ 1.66
APAF1-210ENST00000551964 NACADO15069 1562 aa25.43■■□□□ 1.66
APAF1-210ENST00000551964 PPP1R15AO75807 674 aaPredicted RBP25.42■■□□□ 1.66
APAF1-210ENST00000551964 CDCA8Q53HL2 280 aa25.42■■□□□ 1.66
APAF1-210ENST00000551964 DDRGK1Q96HY6 314 aa25.41■■□□□ 1.66
APAF1-210ENST00000551964 ARXQ96QS3 562 aa25.4■■□□□ 1.66
APAF1-210ENST00000551964 CFAP53Q96M91 514 aa25.38■■□□□ 1.65
APAF1-210ENST00000551964 BECN1Q14457 450 aa25.37■■□□□ 1.65
APAF1-210ENST00000551964 KNSTRNQ9Y448 316 aa25.37■■□□□ 1.65
APAF1-210ENST00000551964 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
APAF1-210ENST00000551964 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
APAF1-210ENST00000551964 ZBTB7CA1YPR0 619 aa25.29■■□□□ 1.64
APAF1-210ENST00000551964 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
APAF1-210ENST00000551964 GLIPR1L2Q4G1C9 344 aa25.28■■□□□ 1.64
APAF1-210ENST00000551964 SUPT16HQ9Y5B9 1047 aaKnown RBP25.27■■□□□ 1.64
APAF1-210ENST00000551964 SIN3AQ96ST3 1273 aa25.24■■□□□ 1.63
APAF1-210ENST00000551964 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
APAF1-210ENST00000551964 SENP3-EIF4A1A0A087X0R7 540 aa25.21■■□□□ 1.63
APAF1-210ENST00000551964 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
APAF1-210ENST00000551964 NCLP19338 710 aaKnown RBP25.19■■□□□ 1.62
APAF1-210ENST00000551964 GOLGA6L22H0YM25 854 aa25.18■■□□□ 1.62
APAF1-210ENST00000551964 A0A0G2JS52 829 aa25.17■■□□□ 1.62
APAF1-210ENST00000551964 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
APAF1-210ENST00000551964 FTSJ3Q8IY81 847 aaKnown RBP25.17■■□□□ 1.62
APAF1-210ENST00000551964 PLEKHG5O94827 1062 aa25.17■■□□□ 1.62
APAF1-210ENST00000551964 CCNB3Q8WWL7 1395 aa25.16■■□□□ 1.62
APAF1-210ENST00000551964 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
APAF1-210ENST00000551964 PPP4R2Q9NY27 417 aa25.14■■□□□ 1.61
APAF1-210ENST00000551964 MAPK8IP3Q9UPT6 1336 aa25.13■■□□□ 1.61
APAF1-210ENST00000551964 NUDCQ9Y266 331 aa25.12■■□□□ 1.61
APAF1-210ENST00000551964 CASC1Q6TDU7 716 aa25.11■■□□□ 1.61
APAF1-210ENST00000551964 NEUROD2Q15784 382 aa25.1■■□□□ 1.61
APAF1-210ENST00000551964 ARID4BQ4LE39 1312 aaPredicted RBP25.09■■□□□ 1.61
APAF1-210ENST00000551964 TRIM44Q96DX7 344 aaPredicted RBP25.09■■□□□ 1.61
APAF1-210ENST00000551964 POGKQ9P215 609 aa25.06■■□□□ 1.6
APAF1-210ENST00000551964 TIMELESSQ9UNS1 1208 aa25.06■■□□□ 1.6
APAF1-210ENST00000551964 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
APAF1-210ENST00000551964 LAS1LQ9Y4W2 734 aaKnown RBP25.04■■□□□ 1.6
APAF1-210ENST00000551964 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
APAF1-210ENST00000551964 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
APAF1-210ENST00000551964 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
APAF1-210ENST00000551964 SOGA1O94964 1423 aa25.02■■□□□ 1.6
APAF1-210ENST00000551964 CUX2O14529 1486 aa25.01■■□□□ 1.59
APAF1-210ENST00000551964 TMF1P82094 1093 aa25■■□□□ 1.59
APAF1-210ENST00000551964 FRAT1Q92837 279 aaPredicted RBP24.99■■□□□ 1.59
APAF1-210ENST00000551964 CDK11BP21127 795 aaKnown RBP24.99■■□□□ 1.59
APAF1-210ENST00000551964 CHMP4BQ9H444 224 aaKnown RBP24.98■■□□□ 1.59
APAF1-210ENST00000551964 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
APAF1-210ENST00000551964 DCAF11Q8TEB1 546 aa24.98■■□□□ 1.59
APAF1-210ENST00000551964 HAP1P54257 671 aaPredicted RBP24.98■■□□□ 1.59
APAF1-210ENST00000551964 MS4A1P11836 297 aa24.97■■□□□ 1.59
APAF1-210ENST00000551964 RGS3P49796 1198 aa24.97■■□□□ 1.59
APAF1-210ENST00000551964 TNNT2P45379 298 aaPredicted RBP24.97■■□□□ 1.59
APAF1-210ENST00000551964 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.58
APAF1-210ENST00000551964 KANK1Q14678 1352 aa24.93■■□□□ 1.58
APAF1-210ENST00000551964 PNNQ9H307 717 aaKnown RBP24.93■■□□□ 1.58
APAF1-210ENST00000551964 CCER2I3L3R5 266 aa24.92■■□□□ 1.58
APAF1-210ENST00000551964 VPS8Q8N3P4 1428 aa24.92■■□□□ 1.58
APAF1-210ENST00000551964 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
APAF1-210ENST00000551964 ARHGAP35Q9NRY4 1499 aa24.9■■□□□ 1.58
APAF1-210ENST00000551964 ZRSR1Q15695 479 aaKnown RBP24.9■■□□□ 1.58
APAF1-210ENST00000551964 PTMAP06454 111 aaKnown RBP24.89■■□□□ 1.57
APAF1-210ENST00000551964 NOP58Q9Y2X3 529 aaKnown RBP24.88■■□□□ 1.57
APAF1-210ENST00000551964 B4GALNT3Q6L9W6 998 aa24.87■■□□□ 1.57
APAF1-210ENST00000551964 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
APAF1-210ENST00000551964 LMOD2Q6P5Q4 547 aa24.82■■□□□ 1.56
APAF1-210ENST00000551964 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
APAF1-210ENST00000551964 HSP90AB1P08238 724 aaKnown RBP24.79■■□□□ 1.56
APAF1-210ENST00000551964 MORC1Q86VD1 984 aa24.78■■□□□ 1.56
APAF1-210ENST00000551964 TPRNQ4KMQ1 711 aa24.78■■□□□ 1.56
APAF1-210ENST00000551964 ERICH6BQ5W0A0 696 aa24.78■■□□□ 1.56
APAF1-210ENST00000551964 OS9Q13438 667 aaPredicted RBP24.77■■□□□ 1.56
APAF1-210ENST00000551964 KANK4Q5T7N3 995 aaPredicted RBP24.77■■□□□ 1.56
APAF1-210ENST00000551964 PKD2Q13563 968 aa24.77■■□□□ 1.56
APAF1-210ENST00000551964 SRPK2P78362 688 aaKnown RBP24.76■■□□□ 1.55
APAF1-210ENST00000551964 HDGFP51858 240 aaKnown RBP24.75■■□□□ 1.55
APAF1-210ENST00000551964 KTN1Q86UP2 1357 aaKnown RBP24.74■■□□□ 1.55
APAF1-210ENST00000551964 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
APAF1-210ENST00000551964 DNTTIP2Q5QJE6 756 aaKnown RBP24.73■■□□□ 1.55
APAF1-210ENST00000551964 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
APAF1-210ENST00000551964 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
APAF1-210ENST00000551964 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
APAF1-210ENST00000551964 HSCBQ8IWL3 235 aa24.68■■□□□ 1.54
APAF1-210ENST00000551964 FOXD1Q16676 465 aa24.67■■□□□ 1.54
APAF1-210ENST00000551964 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms