RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
TMEM116-214ENST00000551297 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
TMEM116-214ENST00000551297 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
TMEM116-214ENST00000551297 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
TMEM116-214ENST00000551297 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
TMEM116-214ENST00000551297 FYCO1Q9BQS8 1478 aa11.96□□□□□ -0.49
TMEM116-214ENST00000551297 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
TMEM116-214ENST00000551297 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.5
TMEM116-214ENST00000551297 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
TMEM116-214ENST00000551297 TIAM1Q13009 1591 aa11.93□□□□□ -0.5
TMEM116-214ENST00000551297 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
TMEM116-214ENST00000551297 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
TMEM116-214ENST00000551297 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
TMEM116-214ENST00000551297 RANGAP1P46060 587 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-214ENST00000551297 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
TMEM116-214ENST00000551297 UGGT2Q9NYU1 1516 aa11.87□□□□□ -0.51
TMEM116-214ENST00000551297 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-214ENST00000551297 SYNJ2O15056 1496 aa11.87□□□□□ -0.51
TMEM116-214ENST00000551297 GRIN2AQ12879 1464 aa11.87□□□□□ -0.51
TMEM116-214ENST00000551297 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
TMEM116-214ENST00000551297 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
TMEM116-214ENST00000551297 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
TMEM116-214ENST00000551297 AEBP2Q6ZN18 517 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-214ENST00000551297 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
TMEM116-214ENST00000551297 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
TMEM116-214ENST00000551297 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
TMEM116-214ENST00000551297 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
TMEM116-214ENST00000551297 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
TMEM116-214ENST00000551297 KIAA0556O60303 1618 aa11.79□□□□□ -0.52
TMEM116-214ENST00000551297 NUP160Q12769 1436 aa11.78□□□□□ -0.52
TMEM116-214ENST00000551297 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-214ENST00000551297 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
TMEM116-214ENST00000551297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.76□□□□□ -0.53
TMEM116-214ENST00000551297 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
TMEM116-214ENST00000551297 SUPT6HQ7KZ85 1726 aaKnown RBP11.75□□□□□ -0.53
TMEM116-214ENST00000551297 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-214ENST00000551297 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
TMEM116-214ENST00000551297 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
TMEM116-214ENST00000551297 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
TMEM116-214ENST00000551297 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
TMEM116-214ENST00000551297 CLSPNQ9HAW4 1339 aa11.71□□□□□ -0.53
TMEM116-214ENST00000551297 P3H3Q8IVL6 736 aa11.71□□□□□ -0.53
TMEM116-214ENST00000551297 RAPGEF6Q8TEU7 1601 aa11.71□□□□□ -0.54
TMEM116-214ENST00000551297 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
TMEM116-214ENST00000551297 EPRSP07814 1512 aaKnown RBP11.69□□□□□ -0.54
TMEM116-214ENST00000551297 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-214ENST00000551297 LRRIQ1Q96JM4 1722 aa11.68□□□□□ -0.54
TMEM116-214ENST00000551297 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
TMEM116-214ENST00000551297 FGD6Q6ZV73 1430 aa11.66□□□□□ -0.54
TMEM116-214ENST00000551297 CHD1O14646 1710 aa11.66□□□□□ -0.54
TMEM116-214ENST00000551297 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
TMEM116-214ENST00000551297 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
TMEM116-214ENST00000551297 NCOA2Q15596 1464 aa11.65□□□□□ -0.54
TMEM116-214ENST00000551297 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
TMEM116-214ENST00000551297 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-214ENST00000551297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-214ENST00000551297 MIA2Q96PC5 1412 aa11.62□□□□□ -0.55
TMEM116-214ENST00000551297 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
TMEM116-214ENST00000551297 FBLN2P98095 1184 aa11.62□□□□□ -0.55
TMEM116-214ENST00000551297 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
TMEM116-214ENST00000551297 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
TMEM116-214ENST00000551297 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
TMEM116-214ENST00000551297 ADCY10Q96PN6 1610 aa11.6□□□□□ -0.55
TMEM116-214ENST00000551297 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
TMEM116-214ENST00000551297 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
TMEM116-214ENST00000551297 ABCA8O94911 1581 aa11.59□□□□□ -0.55
TMEM116-214ENST00000551297 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
TMEM116-214ENST00000551297 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
TMEM116-214ENST00000551297 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
TMEM116-214ENST00000551297 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-214ENST00000551297 SETD5Q9C0A6 1442 aa11.58□□□□□ -0.56
TMEM116-214ENST00000551297 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
TMEM116-214ENST00000551297 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
TMEM116-214ENST00000551297 PRG4Q92954 1404 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-214ENST00000551297 KIF14Q15058 1648 aa11.55□□□□□ -0.56
TMEM116-214ENST00000551297 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
TMEM116-214ENST00000551297 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
TMEM116-214ENST00000551297 RAB3GAP2Q9H2M9 1393 aa11.53□□□□□ -0.56
TMEM116-214ENST00000551297 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.56
TMEM116-214ENST00000551297 HFM1A2PYH4 1435 aa11.52□□□□□ -0.56
TMEM116-214ENST00000551297 PTPRGP23470 1445 aa11.52□□□□□ -0.56
TMEM116-214ENST00000551297 PLB1Q6P1J6 1458 aa11.52□□□□□ -0.56
TMEM116-214ENST00000551297 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
TMEM116-214ENST00000551297 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
TMEM116-214ENST00000551297 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
TMEM116-214ENST00000551297 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
TMEM116-214ENST00000551297 ITGAEP38570 1179 aa11.47□□□□□ -0.57
TMEM116-214ENST00000551297 UHRF1BP1LA0JNW5 1464 aa11.46□□□□□ -0.57
TMEM116-214ENST00000551297 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.58
TMEM116-214ENST00000551297 PLEKHD1A6NEE1 506 aa11.45□□□□□ -0.58
TMEM116-214ENST00000551297 ATP10BO94823 1461 aa11.44□□□□□ -0.58
TMEM116-214ENST00000551297 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
TMEM116-214ENST00000551297 SHANK2Q9UPX8 1470 aa11.44□□□□□ -0.58
TMEM116-214ENST00000551297 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
TMEM116-214ENST00000551297 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
TMEM116-214ENST00000551297 DAPK1P53355 1430 aa11.43□□□□□ -0.58
TMEM116-214ENST00000551297 NAIPQ13075 1403 aa11.43□□□□□ -0.58
TMEM116-214ENST00000551297 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
TMEM116-214ENST00000551297 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
TMEM116-214ENST00000551297 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms