RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 FAM69CQ0P6D2 419 aa33.17■■■□□ 2.9
RPAP3-207ENST00000551293 RUSC2Q8N2Y8 1516 aa33.12■■■□□ 2.89
RPAP3-207ENST00000551293 NPM1P06748 294 aaKnown RBP eCLIP33.11■■■□□ 2.89
RPAP3-207ENST00000551293 ABCC10Q5T3U5 1492 aa33.05■■■□□ 2.88
RPAP3-207ENST00000551293 ADCY10Q96PN6 1610 aa33■■■□□ 2.87
RPAP3-207ENST00000551293 MAPKBP1O60336 1514 aa32.97■■■□□ 2.87
RPAP3-207ENST00000551293 DIP2BQ9P265 1576 aa32.96■■■□□ 2.87
RPAP3-207ENST00000551293 TTBK1Q5TCY1 1321 aaPredicted RBP32.95■■■□□ 2.86
RPAP3-207ENST00000551293 IGF1RP08069 1367 aa32.9■■■□□ 2.86
RPAP3-207ENST00000551293 KIAA0586Q9BVV6 1533 aa32.9■■■□□ 2.86
RPAP3-207ENST00000551293 KDM6BO15054 1643 aa32.83■■■□□ 2.85
RPAP3-207ENST00000551293 TSPOAP1O95153 1857 aa32.82■■■□□ 2.85
RPAP3-207ENST00000551293 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
RPAP3-207ENST00000551293 KDM4FA0A1W2PPD8 638 aa32.8■■■□□ 2.84
RPAP3-207ENST00000551293 PTPRGP23470 1445 aa32.76■■■□□ 2.83
RPAP3-207ENST00000551293 CUL7Q14999 1698 aa32.75■■■□□ 2.83
RPAP3-207ENST00000551293 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
RPAP3-207ENST00000551293 TNIKQ9UKE5 1360 aa32.62■■■□□ 2.81
RPAP3-207ENST00000551293 CARMIL2Q6F5E8 1435 aa32.6■■■□□ 2.81
RPAP3-207ENST00000551293 ABCC2Q92887 1545 aa32.59■■■□□ 2.81
RPAP3-207ENST00000551293 ASXL2Q76L83 1435 aa32.59■■■□□ 2.81
RPAP3-207ENST00000551293 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
RPAP3-207ENST00000551293 PLB1Q6P1J6 1458 aa32.49■■■□□ 2.79
RPAP3-207ENST00000551293 PPRC1Q5VV67 1664 aaKnown RBP32.48■■■□□ 2.79
RPAP3-207ENST00000551293 UACAQ9BZF9 1416 aa32.46■■■□□ 2.79
RPAP3-207ENST00000551293 DISP1Q96F81 1524 aa32.45■■■□□ 2.78
RPAP3-207ENST00000551293 GLI2P10070 1586 aa32.44■■■□□ 2.78
RPAP3-207ENST00000551293 UHRF1BP1LA0JNW5 1464 aa32.43■■■□□ 2.78
RPAP3-207ENST00000551293 ADGRL1O94910 1474 aa32.39■■■□□ 2.78
RPAP3-207ENST00000551293 COL17A1Q9UMD9 1497 aaPredicted RBP32.39■■■□□ 2.78
RPAP3-207ENST00000551293 EPRSP07814 1512 aaKnown RBP32.36■■■□□ 2.77
RPAP3-207ENST00000551293 ILDR1Q86SU0 546 aaPredicted RBP32.34■■■□□ 2.77
RPAP3-207ENST00000551293 KDM5BQ9UGL1 1544 aa32.31■■■□□ 2.76
RPAP3-207ENST00000551293 ZCCHC11Q5TAX3 1644 aaKnown RBP32.29■■■□□ 2.76
RPAP3-207ENST00000551293 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
RPAP3-207ENST00000551293 MAP3K4Q9Y6R4 1608 aa32.28■■■□□ 2.76
RPAP3-207ENST00000551293 UGGT2Q9NYU1 1516 aa32.27■■■□□ 2.76
RPAP3-207ENST00000551293 KIAA0556O60303 1618 aa32.25■■■□□ 2.75
RPAP3-207ENST00000551293 TEX14Q8IWB6 1497 aa32.22■■■□□ 2.75
RPAP3-207ENST00000551293 KCNH8Q96L42 1107 aa32.15■■■□□ 2.74
RPAP3-207ENST00000551293 WDR7Q9Y4E6 1490 aa32.15■■■□□ 2.74
RPAP3-207ENST00000551293 HECW2Q9P2P5 1572 aa32.09■■■□□ 2.73
RPAP3-207ENST00000551293 CD109Q6YHK3 1445 aa32.05■■■□□ 2.72
RPAP3-207ENST00000551293 ARID3CA6NKF2 412 aa32.02■■■□□ 2.72
RPAP3-207ENST00000551293 CTTNBP2Q8WZ74 1663 aa32■■■□□ 2.71
RPAP3-207ENST00000551293 ABCA8O94911 1581 aa31.98■■■□□ 2.71
RPAP3-207ENST00000551293 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
RPAP3-207ENST00000551293 MAGI3Q5TCQ9 1506 aa31.95■■■□□ 2.71
RPAP3-207ENST00000551293 CFAP43Q8NDM7 1665 aa31.92■■■□□ 2.7
RPAP3-207ENST00000551293 P3H3Q8IVL6 736 aa31.92■■■□□ 2.7
RPAP3-207ENST00000551293 KIF21BO75037 1637 aa31.86■■■□□ 2.69
RPAP3-207ENST00000551293 PRXQ9BXM0 1461 aa31.82■■■□□ 2.68
RPAP3-207ENST00000551293 ATP10BO94823 1461 aa31.76■■■□□ 2.67
RPAP3-207ENST00000551293 ARAP3Q8WWN8 1544 aa31.72■■■□□ 2.67
RPAP3-207ENST00000551293 FAM9AQ8IZU1 332 aaPredicted RBP31.71■■■□□ 2.67
RPAP3-207ENST00000551293 RAPGEF3O95398 923 aa31.7■■■□□ 2.67
RPAP3-207ENST00000551293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
RPAP3-207ENST00000551293 HNRNPUL2Q1KMD3 747 aaKnown RBP31.68■■■□□ 2.66
RPAP3-207ENST00000551293 RANGAP1P46060 587 aaPredicted RBP31.65■■■□□ 2.66
RPAP3-207ENST00000551293 ABCA9Q8IUA7 1624 aa31.61■■■□□ 2.65
RPAP3-207ENST00000551293 PTPRMP28827 1452 aa31.59■■■□□ 2.65
RPAP3-207ENST00000551293 ARID4BQ4LE39 1312 aaPredicted RBP31.57■■■□□ 2.64
RPAP3-207ENST00000551293 ADAMTSL3P82987 1691 aa31.54■■■□□ 2.64
RPAP3-207ENST00000551293 RAPGEF6Q8TEU7 1601 aa31.54■■■□□ 2.64
RPAP3-207ENST00000551293 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
RPAP3-207ENST00000551293 SAMD9Q5K651 1589 aa31.53■■■□□ 2.64
RPAP3-207ENST00000551293 CSRNP3Q8WYN3 585 aa31.52■■■□□ 2.64
RPAP3-207ENST00000551293 NEO1Q92859 1461 aa31.51■■■□□ 2.63
RPAP3-207ENST00000551293 FRMPD1Q5SYB0 1578 aa31.49■■■□□ 2.63
RPAP3-207ENST00000551293 FBXO41Q8TF61 875 aa31.49■■■□□ 2.63
RPAP3-207ENST00000551293 NUP153P49790 1475 aaKnown RBP31.46■■■□□ 2.63
RPAP3-207ENST00000551293 FHOD3Q2V2M9 1422 aa31.45■■■□□ 2.63
RPAP3-207ENST00000551293 PLPPR3Q6T4P5 718 aa31.45■■■□□ 2.63
RPAP3-207ENST00000551293 MADDQ8WXG6 1647 aa31.45■■■□□ 2.62
RPAP3-207ENST00000551293 BCORL1Q5H9F3 1711 aa31.44■■■□□ 2.62
RPAP3-207ENST00000551293 PCF11O94913 1555 aaKnown RBP31.36■■■□□ 2.61
RPAP3-207ENST00000551293 PLEKHD1A6NEE1 506 aa31.36■■■□□ 2.61
RPAP3-207ENST00000551293 DENND4BO75064 1496 aaPredicted RBP31.34■■■□□ 2.61
RPAP3-207ENST00000551293 LMTK3Q96Q04 1460 aa31.34■■■□□ 2.61
RPAP3-207ENST00000551293 AKNAQ7Z591 1439 aa31.32■■■□□ 2.61
RPAP3-207ENST00000551293 RIMS1Q86UR5 1692 aaKnown RBP31.32■■■□□ 2.6
RPAP3-207ENST00000551293 ARHGEF40Q8TER5 1519 aa31.32■■■□□ 2.6
RPAP3-207ENST00000551293 HSPA2P54652 639 aa31.31■■■□□ 2.6
RPAP3-207ENST00000551293 FANCAO15360 1455 aa31.29■■■□□ 2.6
RPAP3-207ENST00000551293 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
RPAP3-207ENST00000551293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.27■■■□□ 2.6
RPAP3-207ENST00000551293 MLECQ14165 292 aa31.26■■■□□ 2.59
RPAP3-207ENST00000551293 TTC37Q6PGP7 1564 aa31.24■■■□□ 2.59
RPAP3-207ENST00000551293 YEATS2Q9ULM3 1422 aa31.24■■■□□ 2.59
RPAP3-207ENST00000551293 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
RPAP3-207ENST00000551293 SIGLEC1Q9BZZ2 1709 aa31.2■■■□□ 2.58
RPAP3-207ENST00000551293 CDK13Q14004 1512 aaKnown RBP31.19■■■□□ 2.58
RPAP3-207ENST00000551293 ZFYVE16Q7Z3T8 1539 aa31.18■■■□□ 2.58
RPAP3-207ENST00000551293 CFAP74Q9C0B2 1584 aa31.17■■■□□ 2.58
RPAP3-207ENST00000551293 POGZQ7Z3K3 1410 aa31.16■■■□□ 2.58
RPAP3-207ENST00000551293 EEA1Q15075 1411 aa31.15■■■□□ 2.58
RPAP3-207ENST00000551293 ATP1B4Q9UN42 357 aaPredicted RBP31.14■■■□□ 2.58
RPAP3-207ENST00000551293 ZMYM4Q5VZL5 1548 aa31.14■■■□□ 2.57
RPAP3-207ENST00000551293 EFCAB5A4FU69 1503 aa31.11■■■□□ 2.57
RPAP3-207ENST00000551293 HECW1Q76N89 1606 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms