RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 ADAMTS12P58397 1594 aa30.24■■■□□ 2.43
KRT18-207ENST00000550600 EFCAB5A4FU69 1503 aa30.21■■■□□ 2.43
KRT18-207ENST00000550600 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
KRT18-207ENST00000550600 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
KRT18-207ENST00000550600 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
KRT18-207ENST00000550600 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
KRT18-207ENST00000550600 SAMD9Q5K651 1589 aa29.99■■■□□ 2.39
KRT18-207ENST00000550600 MAP3K1Q13233 1512 aa29.98■■■□□ 2.39
KRT18-207ENST00000550600 IQGAP2Q13576 1575 aa29.98■■■□□ 2.39
KRT18-207ENST00000550600 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
KRT18-207ENST00000550600 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
KRT18-207ENST00000550600 FMN1Q68DA7 1419 aa29.96■■■□□ 2.39
KRT18-207ENST00000550600 KIAA0586Q9BVV6 1533 aa29.92■■■□□ 2.38
KRT18-207ENST00000550600 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
KRT18-207ENST00000550600 FHOD3Q2V2M9 1422 aa29.92■■■□□ 2.38
KRT18-207ENST00000550600 P3H3Q8IVL6 736 aa29.89■■■□□ 2.38
KRT18-207ENST00000550600 FYCO1Q9BQS8 1478 aa29.88■■■□□ 2.37
KRT18-207ENST00000550600 TTBK1Q5TCY1 1321 aaPredicted RBP29.88■■■□□ 2.37
KRT18-207ENST00000550600 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
KRT18-207ENST00000550600 UGGT2Q9NYU1 1516 aa29.85■■■□□ 2.37
KRT18-207ENST00000550600 TIAM1Q13009 1591 aa29.82■■■□□ 2.36
KRT18-207ENST00000550600 HRCP23327 699 aa29.81■■■□□ 2.36
KRT18-207ENST00000550600 PCF11O94913 1555 aaKnown RBP29.81■■■□□ 2.36
KRT18-207ENST00000550600 NUP160Q12769 1436 aa29.76■■■□□ 2.36
KRT18-207ENST00000550600 KANK4Q5T7N3 995 aaPredicted RBP29.76■■■□□ 2.35
KRT18-207ENST00000550600 CFAP43Q8NDM7 1665 aa29.74■■■□□ 2.35
KRT18-207ENST00000550600 FBLN2P98095 1184 aa29.74■■■□□ 2.35
KRT18-207ENST00000550600 CEP170Q5SW79 1584 aa29.71■■■□□ 2.35
KRT18-207ENST00000550600 LRRC9Q6ZRR7 1453 aa29.69■■■□□ 2.34
KRT18-207ENST00000550600 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
KRT18-207ENST00000550600 KIAA0556O60303 1618 aa29.64■■■□□ 2.34
KRT18-207ENST00000550600 DISP1Q96F81 1524 aa29.62■■■□□ 2.33
KRT18-207ENST00000550600 CARMIL2Q6F5E8 1435 aa29.6■■■□□ 2.33
KRT18-207ENST00000550600 CCDC18Q5T9S5 1454 aa29.59■■■□□ 2.33
KRT18-207ENST00000550600 ZEB1P37275 1124 aaPredicted RBP29.58■■■□□ 2.33
KRT18-207ENST00000550600 RRBP1Q9P2E9 1410 aaKnown RBP29.58■■■□□ 2.33
KRT18-207ENST00000550600 JPH4Q96JJ6 628 aa29.57■■■□□ 2.32
KRT18-207ENST00000550600 HECW1Q76N89 1606 aa29.57■■■□□ 2.32
KRT18-207ENST00000550600 CHD1O14646 1710 aa29.52■■■□□ 2.32
KRT18-207ENST00000550600 CCNB3Q8WWL7 1395 aa29.48■■■□□ 2.31
KRT18-207ENST00000550600 MTUS2Q5JR59 1369 aa29.47■■■□□ 2.31
KRT18-207ENST00000550600 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.31
KRT18-207ENST00000550600 EPRSP07814 1512 aaKnown RBP29.42■■■□□ 2.3
KRT18-207ENST00000550600 EHBP1L1Q8N3D4 1523 aa29.42■■■□□ 2.3
KRT18-207ENST00000550600 HNRNPUL2Q1KMD3 747 aaKnown RBP29.4■■■□□ 2.3
KRT18-207ENST00000550600 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
KRT18-207ENST00000550600 PHLDB1Q86UU1 1377 aa29.36■■■□□ 2.29
KRT18-207ENST00000550600 SUPT6HQ7KZ85 1726 aaKnown RBP29.35■■■□□ 2.29
KRT18-207ENST00000550600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.33■■■□□ 2.29
KRT18-207ENST00000550600 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
KRT18-207ENST00000550600 SHROOM2Q13796 1616 aa29.32■■■□□ 2.28
KRT18-207ENST00000550600 CCER1Q8TC90 406 aaPredicted RBP29.31■■■□□ 2.28
KRT18-207ENST00000550600 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
KRT18-207ENST00000550600 NUP153P49790 1475 aaKnown RBP29.29■■■□□ 2.28
KRT18-207ENST00000550600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.28■■■□□ 2.28
KRT18-207ENST00000550600 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
KRT18-207ENST00000550600 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
KRT18-207ENST00000550600 ARHGEF11O15085 1522 aa29.23■■■□□ 2.27
KRT18-207ENST00000550600 ABCA8O94911 1581 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 MAGI3Q5TCQ9 1506 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 CLASP1Q7Z460 1538 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 PTPRGP23470 1445 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 FGD6Q6ZV73 1430 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 PLB1Q6P1J6 1458 aa29.21■■■□□ 2.27
KRT18-207ENST00000550600 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.27
KRT18-207ENST00000550600 FAM50AQ14320 339 aaKnown RBP29.16■■■□□ 2.26
KRT18-207ENST00000550600 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
KRT18-207ENST00000550600 MIA2Q96PC5 1412 aa29.1■■■□□ 2.25
KRT18-207ENST00000550600 ARID3CA6NKF2 412 aa29.07■■■□□ 2.24
KRT18-207ENST00000550600 ITGAEP38570 1179 aa29.05■■■□□ 2.24
KRT18-207ENST00000550600 UACAQ9BZF9 1416 aa29.05■■■□□ 2.24
KRT18-207ENST00000550600 PTPN23Q9H3S7 1636 aa29.03■■■□□ 2.24
KRT18-207ENST00000550600 PLEKHD1A6NEE1 506 aa29.02■■■□□ 2.24
KRT18-207ENST00000550600 ATP10BO94823 1461 aa29.02■■■□□ 2.24
KRT18-207ENST00000550600 TCOF1Q13428 1488 aaKnown RBP29.02■■■□□ 2.24
KRT18-207ENST00000550600 ADCY10Q96PN6 1610 aa29.01■■■□□ 2.24
KRT18-207ENST00000550600 CLSPNQ9HAW4 1339 aa29.01■■■□□ 2.23
KRT18-207ENST00000550600 SETD5Q9C0A6 1442 aa28.99■■■□□ 2.23
KRT18-207ENST00000550600 ERCC6L2Q5T890 1561 aa28.94■■■□□ 2.22
KRT18-207ENST00000550600 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
KRT18-207ENST00000550600 OSCARQ8IYS5 282 aa28.93■■■□□ 2.22
KRT18-207ENST00000550600 ITSN2Q9NZM3 1697 aa28.91■■■□□ 2.22
KRT18-207ENST00000550600 UHRF1BP1LA0JNW5 1464 aa28.91■■■□□ 2.22
KRT18-207ENST00000550600 RAB3GAP2Q9H2M9 1393 aa28.9■■■□□ 2.22
KRT18-207ENST00000550600 KIF14Q15058 1648 aa28.89■■■□□ 2.22
KRT18-207ENST00000550600 DHX57Q6P158 1386 aaKnown RBP28.87■■■□□ 2.21
KRT18-207ENST00000550600 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
KRT18-207ENST00000550600 HFM1A2PYH4 1435 aa28.82■■■□□ 2.2
KRT18-207ENST00000550600 CFDP1Q9UEE9 299 aaPredicted RBP28.8■■■□□ 2.2
KRT18-207ENST00000550600 AKNAQ7Z591 1439 aa28.79■■■□□ 2.2
KRT18-207ENST00000550600 ABCC10Q5T3U5 1492 aa28.79■■■□□ 2.2
KRT18-207ENST00000550600 PTPRKQ15262 1439 aa28.78■■■□□ 2.2
KRT18-207ENST00000550600 ACIN1Q9UKV3 1341 aaKnown RBP28.76■■■□□ 2.2
KRT18-207ENST00000550600 KDM5BQ9UGL1 1544 aa28.75■■■□□ 2.19
KRT18-207ENST00000550600 DNMT1P26358 1616 aaKnown RBP28.73■■■□□ 2.19
KRT18-207ENST00000550600 CDC42BPAQ5VT25 1732 aa28.71■■■□□ 2.19
KRT18-207ENST00000550600 NAIPQ13075 1403 aa28.71■■■□□ 2.19
KRT18-207ENST00000550600 DAPK1P53355 1430 aa28.7■■■□□ 2.18
KRT18-207ENST00000550600 ROCK1Q13464 1354 aa28.7■■■□□ 2.18
KRT18-207ENST00000550600 CAMSAP2Q08AD1 1489 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms