RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 FAM69CQ0P6D2 419 aa30.25■■■□□ 2.43
HCFC2-205ENST00000550444 RUSC2Q8N2Y8 1516 aa30.22■■■□□ 2.43
HCFC2-205ENST00000550444 KIF13AQ9H1H9 1805 aa30.18■■■□□ 2.42
HCFC2-205ENST00000550444 IGF1RP08069 1367 aa30.17■■■□□ 2.42
HCFC2-205ENST00000550444 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
HCFC2-205ENST00000550444 ABCC10Q5T3U5 1492 aa30.12■■■□□ 2.41
HCFC2-205ENST00000550444 KIAA0586Q9BVV6 1533 aa30.12■■■□□ 2.41
HCFC2-205ENST00000550444 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
HCFC2-205ENST00000550444 ADCY10Q96PN6 1610 aa30.05■■■□□ 2.4
HCFC2-205ENST00000550444 MAPKBP1O60336 1514 aa30.05■■■□□ 2.4
HCFC2-205ENST00000550444 CUL7Q14999 1698 aa29.99■■■□□ 2.39
HCFC2-205ENST00000550444 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
HCFC2-205ENST00000550444 CARMIL1Q5VZK9 1371 aa29.98■■■□□ 2.39
HCFC2-205ENST00000550444 PTPRGP23470 1445 aa29.97■■■□□ 2.39
HCFC2-205ENST00000550444 CARMIL2Q6F5E8 1435 aa29.88■■■□□ 2.37
HCFC2-205ENST00000550444 TNIKQ9UKE5 1360 aa29.87■■■□□ 2.37
HCFC2-205ENST00000550444 KDM6BO15054 1643 aa29.84■■■□□ 2.37
HCFC2-205ENST00000550444 TSPOAP1O95153 1857 aa29.82■■■□□ 2.37
HCFC2-205ENST00000550444 KDM4FA0A1W2PPD8 638 aa29.78■■■□□ 2.36
HCFC2-205ENST00000550444 ABCC2Q92887 1545 aa29.76■■■□□ 2.36
HCFC2-205ENST00000550444 IQGAP2Q13576 1575 aa29.75■■■□□ 2.35
HCFC2-205ENST00000550444 ASXL2Q76L83 1435 aa29.74■■■□□ 2.35
HCFC2-205ENST00000550444 PLB1Q6P1J6 1458 aa29.7■■■□□ 2.35
HCFC2-205ENST00000550444 UACAQ9BZF9 1416 aa29.7■■■□□ 2.34
HCFC2-205ENST00000550444 DISP1Q96F81 1524 aa29.66■■■□□ 2.34
HCFC2-205ENST00000550444 UHRF1BP1LA0JNW5 1464 aa29.66■■■□□ 2.34
HCFC2-205ENST00000550444 RAPGEF2Q9Y4G8 1499 aa29.63■■■□□ 2.33
HCFC2-205ENST00000550444 GLI2P10070 1586 aa29.6■■■□□ 2.33
HCFC2-205ENST00000550444 UGGT2Q9NYU1 1516 aa29.55■■■□□ 2.32
HCFC2-205ENST00000550444 EPRSP07814 1512 aaKnown RBP29.53■■■□□ 2.32
HCFC2-205ENST00000550444 KDM5BQ9UGL1 1544 aa29.53■■■□□ 2.32
HCFC2-205ENST00000550444 PPRC1Q5VV67 1664 aaKnown RBP29.52■■■□□ 2.32
HCFC2-205ENST00000550444 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
HCFC2-205ENST00000550444 COL17A1Q9UMD9 1497 aaPredicted RBP29.47■■■□□ 2.31
HCFC2-205ENST00000550444 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
HCFC2-205ENST00000550444 TEX14Q8IWB6 1497 aa29.42■■■□□ 2.3
HCFC2-205ENST00000550444 ADGRL1O94910 1474 aa29.41■■■□□ 2.3
HCFC2-205ENST00000550444 MAP3K4Q9Y6R4 1608 aa29.4■■■□□ 2.3
HCFC2-205ENST00000550444 KCNH8Q96L42 1107 aa29.39■■■□□ 2.3
HCFC2-205ENST00000550444 WDR7Q9Y4E6 1490 aa29.36■■■□□ 2.29
HCFC2-205ENST00000550444 GOLGA3Q08378 1498 aa29.33■■■□□ 2.29
HCFC2-205ENST00000550444 CD109Q6YHK3 1445 aa29.28■■■□□ 2.28
HCFC2-205ENST00000550444 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
HCFC2-205ENST00000550444 ARID3CA6NKF2 412 aa29.25■■■□□ 2.27
HCFC2-205ENST00000550444 P3H3Q8IVL6 736 aa29.24■■■□□ 2.27
HCFC2-205ENST00000550444 ABCA8O94911 1581 aa29.23■■■□□ 2.27
HCFC2-205ENST00000550444 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
HCFC2-205ENST00000550444 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
HCFC2-205ENST00000550444 ILDR1Q86SU0 546 aaPredicted RBP29.2■■■□□ 2.26
HCFC2-205ENST00000550444 MAGI3Q5TCQ9 1506 aa29.19■■■□□ 2.26
HCFC2-205ENST00000550444 CFAP43Q8NDM7 1665 aa29.12■■■□□ 2.25
HCFC2-205ENST00000550444 ATP10BO94823 1461 aa29.06■■■□□ 2.24
HCFC2-205ENST00000550444 HECW2Q9P2P5 1572 aa29.05■■■□□ 2.24
HCFC2-205ENST00000550444 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
HCFC2-205ENST00000550444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.04■■■□□ 2.24
HCFC2-205ENST00000550444 HNRNPUL2Q1KMD3 747 aaKnown RBP29.04■■■□□ 2.24
HCFC2-205ENST00000550444 RANGAP1P46060 587 aaPredicted RBP29.02■■■□□ 2.24
HCFC2-205ENST00000550444 ARAP3Q8WWN8 1544 aa28.96■■■□□ 2.23
HCFC2-205ENST00000550444 RAPGEF3O95398 923 aa28.94■■■□□ 2.22
HCFC2-205ENST00000550444 KIF21BO75037 1637 aa28.94■■■□□ 2.22
HCFC2-205ENST00000550444 PHLDB1Q86UU1 1377 aa28.9■■■□□ 2.22
HCFC2-205ENST00000550444 ABCA9Q8IUA7 1624 aa28.87■■■□□ 2.21
HCFC2-205ENST00000550444 SAMD9Q5K651 1589 aa28.87■■■□□ 2.21
HCFC2-205ENST00000550444 RAPGEF6Q8TEU7 1601 aa28.87■■■□□ 2.21
HCFC2-205ENST00000550444 ARID4BQ4LE39 1312 aaPredicted RBP28.83■■■□□ 2.21
HCFC2-205ENST00000550444 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
HCFC2-205ENST00000550444 NEO1Q92859 1461 aa28.8■■■□□ 2.2
HCFC2-205ENST00000550444 PLEKHD1A6NEE1 506 aa28.8■■■□□ 2.2
HCFC2-205ENST00000550444 NUP153P49790 1475 aaKnown RBP28.78■■■□□ 2.2
HCFC2-205ENST00000550444 EEA1Q15075 1411 aa28.75■■■□□ 2.19
HCFC2-205ENST00000550444 PTPRMP28827 1452 aa28.74■■■□□ 2.19
HCFC2-205ENST00000550444 ADAMTSL3P82987 1691 aa28.69■■■□□ 2.18
HCFC2-205ENST00000550444 FRMPD1Q5SYB0 1578 aa28.67■■■□□ 2.18
HCFC2-205ENST00000550444 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
HCFC2-205ENST00000550444 AKNAQ7Z591 1439 aa28.65■■■□□ 2.18
HCFC2-205ENST00000550444 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
HCFC2-205ENST00000550444 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
HCFC2-205ENST00000550444 FANCAO15360 1455 aa28.61■■■□□ 2.17
HCFC2-205ENST00000550444 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
HCFC2-205ENST00000550444 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
HCFC2-205ENST00000550444 MADDQ8WXG6 1647 aa28.58■■■□□ 2.17
HCFC2-205ENST00000550444 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
HCFC2-205ENST00000550444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.58■■■□□ 2.17
HCFC2-205ENST00000550444 EFCAB5A4FU69 1503 aa28.55■■■□□ 2.16
HCFC2-205ENST00000550444 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
HCFC2-205ENST00000550444 ARHGEF40Q8TER5 1519 aa28.53■■■□□ 2.16
HCFC2-205ENST00000550444 CDK13Q14004 1512 aaKnown RBP28.52■■■□□ 2.16
HCFC2-205ENST00000550444 TTC37Q6PGP7 1564 aa28.51■■■□□ 2.15
HCFC2-205ENST00000550444 MLECQ14165 292 aa28.51■■■□□ 2.15
HCFC2-205ENST00000550444 RICTORQ6R327 1708 aa28.51■■■□□ 2.15
HCFC2-205ENST00000550444 CFAP74Q9C0B2 1584 aa28.5■■■□□ 2.15
HCFC2-205ENST00000550444 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
HCFC2-205ENST00000550444 POGZQ7Z3K3 1410 aa28.49■■■□□ 2.15
HCFC2-205ENST00000550444 YEATS2Q9ULM3 1422 aa28.49■■■□□ 2.15
HCFC2-205ENST00000550444 RIMS1Q86UR5 1692 aaKnown RBP28.48■■■□□ 2.15
HCFC2-205ENST00000550444 LMTK3Q96Q04 1460 aa28.47■■■□□ 2.15
HCFC2-205ENST00000550444 SCAPERQ9BY12 1400 aa28.46■■■□□ 2.15
HCFC2-205ENST00000550444 HSPA2P54652 639 aa28.46■■■□□ 2.15
HCFC2-205ENST00000550444 ZFYVE16Q7Z3T8 1539 aa28.45■■■□□ 2.15
HCFC2-205ENST00000550444 PLCH2O75038 1416 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms