RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
TRAFD1-207ENST00000550051 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
TRAFD1-207ENST00000550051 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
TRAFD1-207ENST00000550051 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
TRAFD1-207ENST00000550051 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAFD1-207ENST00000550051 RUSC2Q8N2Y8 1516 aa17.46■□□□□ 0.39
TRAFD1-207ENST00000550051 IGF1RP08069 1367 aa17.43■□□□□ 0.38
TRAFD1-207ENST00000550051 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
TRAFD1-207ENST00000550051 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
TRAFD1-207ENST00000550051 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
TRAFD1-207ENST00000550051 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
TRAFD1-207ENST00000550051 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
TRAFD1-207ENST00000550051 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
TRAFD1-207ENST00000550051 CUL7Q14999 1698 aa17.35■□□□□ 0.37
TRAFD1-207ENST00000550051 DIP2BQ9P265 1576 aa17.33■□□□□ 0.37
TRAFD1-207ENST00000550051 PTPRGP23470 1445 aa17.3■□□□□ 0.36
TRAFD1-207ENST00000550051 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
TRAFD1-207ENST00000550051 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
TRAFD1-207ENST00000550051 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
TRAFD1-207ENST00000550051 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
TRAFD1-207ENST00000550051 KDM6BO15054 1643 aa17.22■□□□□ 0.35
TRAFD1-207ENST00000550051 KDM4FA0A1W2PPD8 638 aa17.21■□□□□ 0.35
TRAFD1-207ENST00000550051 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
TRAFD1-207ENST00000550051 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
TRAFD1-207ENST00000550051 IQGAP2Q13576 1575 aa17.17■□□□□ 0.34
TRAFD1-207ENST00000550051 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
TRAFD1-207ENST00000550051 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
TRAFD1-207ENST00000550051 GLI2P10070 1586 aa17.16■□□□□ 0.34
TRAFD1-207ENST00000550051 ASXL2Q76L83 1435 aa17.16■□□□□ 0.34
TRAFD1-207ENST00000550051 FOXD1Q16676 465 aa17.15■□□□□ 0.34
TRAFD1-207ENST00000550051 UACAQ9BZF9 1416 aa17.14■□□□□ 0.33
TRAFD1-207ENST00000550051 DISP1Q96F81 1524 aa17.13■□□□□ 0.33
TRAFD1-207ENST00000550051 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
TRAFD1-207ENST00000550051 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
TRAFD1-207ENST00000550051 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
TRAFD1-207ENST00000550051 KDM5BQ9UGL1 1544 aa17.09■□□□□ 0.33
TRAFD1-207ENST00000550051 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-207ENST00000550051 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
TRAFD1-207ENST00000550051 COL17A1Q9UMD9 1497 aaPredicted RBP17.03■□□□□ 0.32
TRAFD1-207ENST00000550051 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
TRAFD1-207ENST00000550051 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
TRAFD1-207ENST00000550051 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
TRAFD1-207ENST00000550051 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
TRAFD1-207ENST00000550051 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
TRAFD1-207ENST00000550051 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
TRAFD1-207ENST00000550051 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
TRAFD1-207ENST00000550051 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
TRAFD1-207ENST00000550051 ABCA8O94911 1581 aa16.9■□□□□ 0.3
TRAFD1-207ENST00000550051 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
TRAFD1-207ENST00000550051 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
TRAFD1-207ENST00000550051 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
TRAFD1-207ENST00000550051 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
TRAFD1-207ENST00000550051 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-207ENST00000550051 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-207ENST00000550051 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
TRAFD1-207ENST00000550051 ATP10BO94823 1461 aa16.79■□□□□ 0.28
TRAFD1-207ENST00000550051 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.28
TRAFD1-207ENST00000550051 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.28
TRAFD1-207ENST00000550051 PPP6R1Q9UPN7 881 aa16.77■□□□□ 0.28
TRAFD1-207ENST00000550051 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
TRAFD1-207ENST00000550051 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
TRAFD1-207ENST00000550051 ADRA2BP18089 450 aa16.74■□□□□ 0.27
TRAFD1-207ENST00000550051 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
TRAFD1-207ENST00000550051 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
TRAFD1-207ENST00000550051 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
TRAFD1-207ENST00000550051 KIF21BO75037 1637 aa16.69■□□□□ 0.26
TRAFD1-207ENST00000550051 NEO1Q92859 1461 aa16.67■□□□□ 0.26
TRAFD1-207ENST00000550051 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
TRAFD1-207ENST00000550051 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
TRAFD1-207ENST00000550051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
TRAFD1-207ENST00000550051 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-207ENST00000550051 ADAMTSL3P82987 1691 aa16.62■□□□□ 0.25
TRAFD1-207ENST00000550051 EEA1Q15075 1411 aa16.62■□□□□ 0.25
TRAFD1-207ENST00000550051 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
TRAFD1-207ENST00000550051 PTPRMP28827 1452 aa16.61■□□□□ 0.25
TRAFD1-207ENST00000550051 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-207ENST00000550051 FRMPD1Q5SYB0 1578 aa16.56■□□□□ 0.24
TRAFD1-207ENST00000550051 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
TRAFD1-207ENST00000550051 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
TRAFD1-207ENST00000550051 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-207ENST00000550051 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-207ENST00000550051 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
TRAFD1-207ENST00000550051 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
TRAFD1-207ENST00000550051 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-207ENST00000550051 RICTORQ6R327 1708 aa16.52■□□□□ 0.24
TRAFD1-207ENST00000550051 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAFD1-207ENST00000550051 FANCAO15360 1455 aa16.5■□□□□ 0.23
TRAFD1-207ENST00000550051 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
TRAFD1-207ENST00000550051 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
TRAFD1-207ENST00000550051 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
TRAFD1-207ENST00000550051 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
TRAFD1-207ENST00000550051 MAGI2Q86UL8 1455 aa16.46■□□□□ 0.23
TRAFD1-207ENST00000550051 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
TRAFD1-207ENST00000550051 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-207ENST00000550051 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
TRAFD1-207ENST00000550051 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
TRAFD1-207ENST00000550051 PLCH2O75038 1416 aa16.44■□□□□ 0.22
TRAFD1-207ENST00000550051 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
TRAFD1-207ENST00000550051 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-207ENST00000550051 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms