RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 RUSC2Q8N2Y8 1516 aa37.53■■■■□ 3.6
SLC38A1-207ENST00000549633 ABCC10Q5T3U5 1492 aa37.35■■■■□ 3.57
SLC38A1-207ENST00000549633 FAM69CQ0P6D2 419 aa37.35■■■■□ 3.57
SLC38A1-207ENST00000549633 ADCY10Q96PN6 1610 aa37.35■■■■□ 3.57
SLC38A1-207ENST00000549633 MAPKBP1O60336 1514 aa37.31■■■■□ 3.56
SLC38A1-207ENST00000549633 DIP2BQ9P265 1576 aa37.3■■■■□ 3.56
SLC38A1-207ENST00000549633 NPM1P06748 294 aaKnown RBP eCLIP37.28■■■■□ 3.56
SLC38A1-207ENST00000549633 KIAA0586Q9BVV6 1533 aa37.2■■■■□ 3.55
SLC38A1-207ENST00000549633 IGF1RP08069 1367 aa37.17■■■■□ 3.54
SLC38A1-207ENST00000549633 TSPOAP1O95153 1857 aa37.15■■■■□ 3.54
SLC38A1-207ENST00000549633 CUL7Q14999 1698 aa37.15■■■■□ 3.54
SLC38A1-207ENST00000549633 KDM6BO15054 1643 aa37.11■■■■□ 3.53
SLC38A1-207ENST00000549633 KIF27Q86VH2 1401 aa37.08■■■■□ 3.53
SLC38A1-207ENST00000549633 TTBK1Q5TCY1 1321 aaPredicted RBP37.02■■■■□ 3.52
SLC38A1-207ENST00000549633 PTPRGP23470 1445 aa36.95■■■■□ 3.51
SLC38A1-207ENST00000549633 KDM4FA0A1W2PPD8 638 aa36.95■■■■□ 3.51
SLC38A1-207ENST00000549633 CARMIL1Q5VZK9 1371 aa36.9■■■■□ 3.5
SLC38A1-207ENST00000549633 TNIKQ9UKE5 1360 aa36.84■■■■□ 3.49
SLC38A1-207ENST00000549633 ABCC2Q92887 1545 aa36.84■■■■□ 3.49
SLC38A1-207ENST00000549633 CARMIL2Q6F5E8 1435 aa36.82■■■■□ 3.48
SLC38A1-207ENST00000549633 IQGAP2Q13576 1575 aa36.82■■■■□ 3.48
SLC38A1-207ENST00000549633 PPRC1Q5VV67 1664 aaKnown RBP36.81■■■■□ 3.48
SLC38A1-207ENST00000549633 ASXL2Q76L83 1435 aa36.79■■■■□ 3.48
SLC38A1-207ENST00000549633 GLI2P10070 1586 aa36.72■■■■□ 3.47
SLC38A1-207ENST00000549633 PLB1Q6P1J6 1458 aa36.71■■■■□ 3.47
SLC38A1-207ENST00000549633 DISP1Q96F81 1524 aa36.7■■■■□ 3.47
SLC38A1-207ENST00000549633 UHRF1BP1LA0JNW5 1464 aa36.69■■■■□ 3.46
SLC38A1-207ENST00000549633 UACAQ9BZF9 1416 aa36.67■■■■□ 3.46
SLC38A1-207ENST00000549633 COL17A1Q9UMD9 1497 aaPredicted RBP36.57■■■■□ 3.45
SLC38A1-207ENST00000549633 ZCCHC11Q5TAX3 1644 aaKnown RBP36.57■■■■□ 3.44
SLC38A1-207ENST00000549633 EPRSP07814 1512 aaKnown RBP36.57■■■■□ 3.44
SLC38A1-207ENST00000549633 MAP3K4Q9Y6R4 1608 aa36.56■■■■□ 3.44
SLC38A1-207ENST00000549633 ADGRL1O94910 1474 aa36.56■■■■□ 3.44
SLC38A1-207ENST00000549633 KDM5BQ9UGL1 1544 aa36.55■■■■□ 3.44
SLC38A1-207ENST00000549633 UGGT2Q9NYU1 1516 aa36.54■■■■□ 3.44
SLC38A1-207ENST00000549633 KIAA0556O60303 1618 aa36.52■■■■□ 3.44
SLC38A1-207ENST00000549633 RAPGEF2Q9Y4G8 1499 aa36.51■■■■□ 3.44
SLC38A1-207ENST00000549633 TEX14Q8IWB6 1497 aa36.4■■■■□ 3.42
SLC38A1-207ENST00000549633 ILDR1Q86SU0 546 aaPredicted RBP36.35■■■■□ 3.41
SLC38A1-207ENST00000549633 CTTNBP2Q8WZ74 1663 aa36.35■■■■□ 3.41
SLC38A1-207ENST00000549633 WDR7Q9Y4E6 1490 aa36.33■■■■□ 3.41
SLC38A1-207ENST00000549633 HECW2Q9P2P5 1572 aa36.24■■■■□ 3.39
SLC38A1-207ENST00000549633 ABCA8O94911 1581 aa36.2■■■■□ 3.39
SLC38A1-207ENST00000549633 CFAP43Q8NDM7 1665 aa36.19■■■■□ 3.38
SLC38A1-207ENST00000549633 KCNH8Q96L42 1107 aa36.17■■■■□ 3.38
SLC38A1-207ENST00000549633 CD109Q6YHK3 1445 aa36.16■■■■□ 3.38
SLC38A1-207ENST00000549633 GOLGA3Q08378 1498 aa36.15■■■■□ 3.38
SLC38A1-207ENST00000549633 MAGI3Q5TCQ9 1506 aa36.13■■■■□ 3.38
SLC38A1-207ENST00000549633 KIF21BO75037 1637 aa36.05■■■■□ 3.36
SLC38A1-207ENST00000549633 PRXQ9BXM0 1461 aa36.01■■■■□ 3.36
SLC38A1-207ENST00000549633 ARID3CA6NKF2 412 aa36.01■■■■□ 3.36
SLC38A1-207ENST00000549633 P3H3Q8IVL6 736 aa35.93■■■■□ 3.34
SLC38A1-207ENST00000549633 ATP10BO94823 1461 aa35.89■■■■□ 3.34
SLC38A1-207ENST00000549633 ARAP3Q8WWN8 1544 aa35.87■■■■□ 3.33
SLC38A1-207ENST00000549633 ABCA9Q8IUA7 1624 aa35.82■■■■□ 3.32
SLC38A1-207ENST00000549633 SAMD9Q5K651 1589 aa35.75■■■■□ 3.31
SLC38A1-207ENST00000549633 RAPGEF6Q8TEU7 1601 aa35.73■■■■□ 3.31
SLC38A1-207ENST00000549633 ADAMTSL3P82987 1691 aa35.72■■■■□ 3.31
SLC38A1-207ENST00000549633 RAPGEF3O95398 923 aa35.71■■■■□ 3.31
SLC38A1-207ENST00000549633 FAM9AQ8IZU1 332 aaPredicted RBP35.7■■■■□ 3.31
SLC38A1-207ENST00000549633 PTPRMP28827 1452 aa35.67■■■■□ 3.3
SLC38A1-207ENST00000549633 FRMPD1Q5SYB0 1578 aa35.66■■■■□ 3.3
SLC38A1-207ENST00000549633 PHLDB1Q86UU1 1377 aa35.64■■■■□ 3.3
SLC38A1-207ENST00000549633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.63■■■■□ 3.29
SLC38A1-207ENST00000549633 HNRNPUL2Q1KMD3 747 aaKnown RBP35.63■■■■□ 3.29
SLC38A1-207ENST00000549633 NEO1Q92859 1461 aa35.62■■■■□ 3.29
SLC38A1-207ENST00000549633 BCORL1Q5H9F3 1711 aa35.6■■■■□ 3.29
SLC38A1-207ENST00000549633 RANGAP1P46060 587 aaPredicted RBP35.58■■■■□ 3.29
SLC38A1-207ENST00000549633 CSRNP3Q8WYN3 585 aa35.58■■■■□ 3.29
SLC38A1-207ENST00000549633 NUP153P49790 1475 aaKnown RBP35.58■■■■□ 3.29
SLC38A1-207ENST00000549633 MADDQ8WXG6 1647 aa35.57■■■■□ 3.28
SLC38A1-207ENST00000549633 FHOD3Q2V2M9 1422 aa35.52■■■■□ 3.28
SLC38A1-207ENST00000549633 ARID4BQ4LE39 1312 aaPredicted RBP35.51■■■■□ 3.27
SLC38A1-207ENST00000549633 RICTORQ6R327 1708 aa35.46■■■■□ 3.27
SLC38A1-207ENST00000549633 FBXO41Q8TF61 875 aa35.46■■■■□ 3.27
SLC38A1-207ENST00000549633 ARHGEF40Q8TER5 1519 aa35.45■■■■□ 3.27
SLC38A1-207ENST00000549633 RIMS1Q86UR5 1692 aaKnown RBP35.45■■■■□ 3.27
SLC38A1-207ENST00000549633 PCF11O94913 1555 aaKnown RBP35.42■■■■□ 3.26
SLC38A1-207ENST00000549633 DENND4BO75064 1496 aaPredicted RBP35.4■■■■□ 3.26
SLC38A1-207ENST00000549633 LMTK3Q96Q04 1460 aa35.4■■■■□ 3.26
SLC38A1-207ENST00000549633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.37■■■■□ 3.25
SLC38A1-207ENST00000549633 AKNAQ7Z591 1439 aa35.37■■■■□ 3.25
SLC38A1-207ENST00000549633 PLEKHD1A6NEE1 506 aa35.36■■■■□ 3.25
SLC38A1-207ENST00000549633 TTC37Q6PGP7 1564 aa35.36■■■■□ 3.25
SLC38A1-207ENST00000549633 FANCAO15360 1455 aa35.35■■■■□ 3.25
SLC38A1-207ENST00000549633 SIGLEC1Q9BZZ2 1709 aa35.35■■■■□ 3.25
SLC38A1-207ENST00000549633 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
SLC38A1-207ENST00000549633 PLPPR3Q6T4P5 718 aa35.3■■■■□ 3.24
SLC38A1-207ENST00000549633 EEA1Q15075 1411 aa35.27■■■■□ 3.24
SLC38A1-207ENST00000549633 YEATS2Q9ULM3 1422 aa35.26■■■■□ 3.24
SLC38A1-207ENST00000549633 ZMYM4Q5VZL5 1548 aa35.26■■■■□ 3.23
SLC38A1-207ENST00000549633 CDK13Q14004 1512 aaKnown RBP35.25■■■■□ 3.23
SLC38A1-207ENST00000549633 ZFYVE16Q7Z3T8 1539 aa35.24■■■■□ 3.23
SLC38A1-207ENST00000549633 HSPA2P54652 639 aa35.23■■■■□ 3.23
SLC38A1-207ENST00000549633 EFCAB5A4FU69 1503 aa35.22■■■■□ 3.23
SLC38A1-207ENST00000549633 HECW1Q76N89 1606 aa35.2■■■■□ 3.23
SLC38A1-207ENST00000549633 POGZQ7Z3K3 1410 aa35.16■■■■□ 3.22
SLC38A1-207ENST00000549633 MLECQ14165 292 aa35.15■■■■□ 3.22
SLC38A1-207ENST00000549633 FER1L4A9Z1Z3 1794 aa35.14■■■■□ 3.22
SLC38A1-207ENST00000549633 MAGI2Q86UL8 1455 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms