RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
LIN7A-202ENST00000549417 HECW2Q9P2P5 1572 aa12.81□□□□□ -0.36
LIN7A-202ENST00000549417 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
LIN7A-202ENST00000549417 PRG4Q92954 1404 aaPredicted RBP12.79□□□□□ -0.36
LIN7A-202ENST00000549417 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
LIN7A-202ENST00000549417 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
LIN7A-202ENST00000549417 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
LIN7A-202ENST00000549417 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
LIN7A-202ENST00000549417 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
LIN7A-202ENST00000549417 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
LIN7A-202ENST00000549417 FBXO41Q8TF61 875 aa12.72□□□□□ -0.37
LIN7A-202ENST00000549417 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
LIN7A-202ENST00000549417 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
LIN7A-202ENST00000549417 PPRC1Q5VV67 1664 aaKnown RBP12.63□□□□□ -0.39
LIN7A-202ENST00000549417 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
LIN7A-202ENST00000549417 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
LIN7A-202ENST00000549417 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
LIN7A-202ENST00000549417 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
LIN7A-202ENST00000549417 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
LIN7A-202ENST00000549417 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
LIN7A-202ENST00000549417 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
LIN7A-202ENST00000549417 ILDR2Q71H61 639 aa12.52□□□□□ -0.41
LIN7A-202ENST00000549417 GLI2P10070 1586 aa12.52□□□□□ -0.41
LIN7A-202ENST00000549417 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
LIN7A-202ENST00000549417 PTPRGP23470 1445 aa12.5□□□□□ -0.41
LIN7A-202ENST00000549417 CUL7Q14999 1698 aa12.5□□□□□ -0.41
LIN7A-202ENST00000549417 BIVM-ERCC5R4GMW8 1640 aa12.49□□□□□ -0.41
LIN7A-202ENST00000549417 ABCC2Q92887 1545 aa12.49□□□□□ -0.41
LIN7A-202ENST00000549417 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
LIN7A-202ENST00000549417 SOCS7O14512 581 aa12.47□□□□□ -0.41
LIN7A-202ENST00000549417 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
LIN7A-202ENST00000549417 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.42
LIN7A-202ENST00000549417 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
LIN7A-202ENST00000549417 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
LIN7A-202ENST00000549417 TEX14Q8IWB6 1497 aa12.45□□□□□ -0.42
LIN7A-202ENST00000549417 DISP3Q9P2K9 1392 aa12.44□□□□□ -0.42
LIN7A-202ENST00000549417 KIF21BO75037 1637 aa12.44□□□□□ -0.42
LIN7A-202ENST00000549417 TNIKQ9UKE5 1360 aa12.41□□□□□ -0.42
LIN7A-202ENST00000549417 MSH5O43196 834 aa12.39□□□□□ -0.43
LIN7A-202ENST00000549417 UACAQ9BZF9 1416 aa12.37□□□□□ -0.43
LIN7A-202ENST00000549417 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
LIN7A-202ENST00000549417 PTPRMP28827 1452 aa12.37□□□□□ -0.43
LIN7A-202ENST00000549417 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
LIN7A-202ENST00000549417 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
LIN7A-202ENST00000549417 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
LIN7A-202ENST00000549417 PCF11O94913 1555 aaKnown RBP12.34□□□□□ -0.43
LIN7A-202ENST00000549417 IGF1RP08069 1367 aa12.33□□□□□ -0.44
LIN7A-202ENST00000549417 KDM5BQ9UGL1 1544 aa12.33□□□□□ -0.44
LIN7A-202ENST00000549417 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
LIN7A-202ENST00000549417 HSPA2P54652 639 aa12.32□□□□□ -0.44
LIN7A-202ENST00000549417 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
LIN7A-202ENST00000549417 CD109Q6YHK3 1445 aa12.31□□□□□ -0.44
LIN7A-202ENST00000549417 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
LIN7A-202ENST00000549417 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
LIN7A-202ENST00000549417 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
LIN7A-202ENST00000549417 ADRA2BP18089 450 aa12.29□□□□□ -0.44
LIN7A-202ENST00000549417 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
LIN7A-202ENST00000549417 IQGAP2Q13576 1575 aa12.28□□□□□ -0.44
LIN7A-202ENST00000549417 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.44
LIN7A-202ENST00000549417 MADDQ8WXG6 1647 aa12.27□□□□□ -0.44
LIN7A-202ENST00000549417 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
LIN7A-202ENST00000549417 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
LIN7A-202ENST00000549417 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
LIN7A-202ENST00000549417 ARID4BQ4LE39 1312 aaPredicted RBP12.26□□□□□ -0.45
LIN7A-202ENST00000549417 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
LIN7A-202ENST00000549417 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
LIN7A-202ENST00000549417 BCORL1Q5H9F3 1711 aa12.23□□□□□ -0.45
LIN7A-202ENST00000549417 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
LIN7A-202ENST00000549417 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
LIN7A-202ENST00000549417 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
LIN7A-202ENST00000549417 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
LIN7A-202ENST00000549417 ARID3CA6NKF2 412 aa12.17□□□□□ -0.46
LIN7A-202ENST00000549417 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
LIN7A-202ENST00000549417 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
LIN7A-202ENST00000549417 ABCA8O94911 1581 aa12.09□□□□□ -0.47
LIN7A-202ENST00000549417 MLECQ14165 292 aa12.09□□□□□ -0.47
LIN7A-202ENST00000549417 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
LIN7A-202ENST00000549417 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
LIN7A-202ENST00000549417 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
LIN7A-202ENST00000549417 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
LIN7A-202ENST00000549417 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
LIN7A-202ENST00000549417 NEO1Q92859 1461 aa12.04□□□□□ -0.48
LIN7A-202ENST00000549417 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
LIN7A-202ENST00000549417 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
LIN7A-202ENST00000549417 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
LIN7A-202ENST00000549417 FANCAO15360 1455 aa12.02□□□□□ -0.48
LIN7A-202ENST00000549417 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
LIN7A-202ENST00000549417 POGZQ7Z3K3 1410 aa12.02□□□□□ -0.49
LIN7A-202ENST00000549417 ATP10BO94823 1461 aa12.02□□□□□ -0.49
LIN7A-202ENST00000549417 PREX1Q8TCU6 1659 aa12.01□□□□□ -0.49
LIN7A-202ENST00000549417 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
LIN7A-202ENST00000549417 RICTORQ6R327 1708 aa12□□□□□ -0.49
LIN7A-202ENST00000549417 GOLGA3Q08378 1498 aa12□□□□□ -0.49
LIN7A-202ENST00000549417 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
LIN7A-202ENST00000549417 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
LIN7A-202ENST00000549417 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
LIN7A-202ENST00000549417 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
LIN7A-202ENST00000549417 DENND4BO75064 1496 aaPredicted RBP11.98□□□□□ -0.49
LIN7A-202ENST00000549417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
LIN7A-202ENST00000549417 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms