RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
LETMD1-217ENST00000548516 TTBK1Q5TCY1 1321 aaPredicted RBP16.51■□□□□ 0.23
LETMD1-217ENST00000548516 ABCC10Q5T3U5 1492 aa16.45■□□□□ 0.22
LETMD1-217ENST00000548516 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
LETMD1-217ENST00000548516 IGF1RP08069 1367 aa16.43■□□□□ 0.22
LETMD1-217ENST00000548516 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
LETMD1-217ENST00000548516 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
LETMD1-217ENST00000548516 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
LETMD1-217ENST00000548516 PTPRGP23470 1445 aa16.36■□□□□ 0.21
LETMD1-217ENST00000548516 MAPKBP1O60336 1514 aa16.36■□□□□ 0.21
LETMD1-217ENST00000548516 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
LETMD1-217ENST00000548516 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
LETMD1-217ENST00000548516 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
LETMD1-217ENST00000548516 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
LETMD1-217ENST00000548516 KDM6BO15054 1643 aa16.3■□□□□ 0.2
LETMD1-217ENST00000548516 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
LETMD1-217ENST00000548516 CARMIL2Q6F5E8 1435 aa16.28■□□□□ 0.2
LETMD1-217ENST00000548516 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
LETMD1-217ENST00000548516 CUL7Q14999 1698 aa16.26■□□□□ 0.19
LETMD1-217ENST00000548516 ASXL2Q76L83 1435 aa16.23■□□□□ 0.19
LETMD1-217ENST00000548516 ABCC2Q92887 1545 aa16.22■□□□□ 0.19
LETMD1-217ENST00000548516 PLB1Q6P1J6 1458 aa16.2■□□□□ 0.18
LETMD1-217ENST00000548516 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
LETMD1-217ENST00000548516 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
LETMD1-217ENST00000548516 UHRF1BP1LA0JNW5 1464 aa16.13■□□□□ 0.17
LETMD1-217ENST00000548516 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
LETMD1-217ENST00000548516 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-217ENST00000548516 GLI2P10070 1586 aa16.11■□□□□ 0.17
LETMD1-217ENST00000548516 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-217ENST00000548516 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
LETMD1-217ENST00000548516 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
LETMD1-217ENST00000548516 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
LETMD1-217ENST00000548516 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
LETMD1-217ENST00000548516 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
LETMD1-217ENST00000548516 PPRC1Q5VV67 1664 aaKnown RBP16.06■□□□□ 0.16
LETMD1-217ENST00000548516 UGGT2Q9NYU1 1516 aa16.05■□□□□ 0.16
LETMD1-217ENST00000548516 TEX14Q8IWB6 1497 aa16.04■□□□□ 0.16
LETMD1-217ENST00000548516 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
LETMD1-217ENST00000548516 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
LETMD1-217ENST00000548516 ZCCHC11Q5TAX3 1644 aaKnown RBP16.01■□□□□ 0.15
LETMD1-217ENST00000548516 WDR7Q9Y4E6 1490 aa16■□□□□ 0.15
LETMD1-217ENST00000548516 MAP3K4Q9Y6R4 1608 aa15.99■□□□□ 0.15
LETMD1-217ENST00000548516 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
LETMD1-217ENST00000548516 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
LETMD1-217ENST00000548516 FAM9AQ8IZU1 332 aaPredicted RBP15.98■□□□□ 0.15
LETMD1-217ENST00000548516 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
LETMD1-217ENST00000548516 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
LETMD1-217ENST00000548516 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
LETMD1-217ENST00000548516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
LETMD1-217ENST00000548516 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
LETMD1-217ENST00000548516 ABCA8O94911 1581 aa15.88■□□□□ 0.13
LETMD1-217ENST00000548516 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
LETMD1-217ENST00000548516 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
LETMD1-217ENST00000548516 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
LETMD1-217ENST00000548516 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
LETMD1-217ENST00000548516 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.13
LETMD1-217ENST00000548516 ATP10BO94823 1461 aa15.83■□□□□ 0.12
LETMD1-217ENST00000548516 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
LETMD1-217ENST00000548516 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
LETMD1-217ENST00000548516 KIF21BO75037 1637 aa15.79■□□□□ 0.12
LETMD1-217ENST00000548516 ARAP3Q8WWN8 1544 aa15.78■□□□□ 0.12
LETMD1-217ENST00000548516 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
LETMD1-217ENST00000548516 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
LETMD1-217ENST00000548516 PLEKHD1A6NEE1 506 aa15.73■□□□□ 0.11
LETMD1-217ENST00000548516 FBXO41Q8TF61 875 aa15.72■□□□□ 0.11
LETMD1-217ENST00000548516 PTPRMP28827 1452 aa15.71■□□□□ 0.11
LETMD1-217ENST00000548516 NEO1Q92859 1461 aa15.69■□□□□ 0.1
LETMD1-217ENST00000548516 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
LETMD1-217ENST00000548516 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
LETMD1-217ENST00000548516 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
LETMD1-217ENST00000548516 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
LETMD1-217ENST00000548516 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
LETMD1-217ENST00000548516 MLECQ14165 292 aa15.65■□□□□ 0.1
LETMD1-217ENST00000548516 ATP1B4Q9UN42 357 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-217ENST00000548516 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
LETMD1-217ENST00000548516 DENND4BO75064 1496 aaPredicted RBP15.64■□□□□ 0.09
LETMD1-217ENST00000548516 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
LETMD1-217ENST00000548516 HSPA2P54652 639 aa15.63■□□□□ 0.09
LETMD1-217ENST00000548516 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
LETMD1-217ENST00000548516 MADDQ8WXG6 1647 aa15.6■□□□□ 0.09
LETMD1-217ENST00000548516 EEA1Q15075 1411 aa15.6■□□□□ 0.09
LETMD1-217ENST00000548516 FRMPD1Q5SYB0 1578 aa15.59■□□□□ 0.09
LETMD1-217ENST00000548516 FANCAO15360 1455 aa15.59■□□□□ 0.09
LETMD1-217ENST00000548516 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
LETMD1-217ENST00000548516 PCF11O94913 1555 aaKnown RBP15.57■□□□□ 0.08
LETMD1-217ENST00000548516 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
LETMD1-217ENST00000548516 POGZQ7Z3K3 1410 aa15.56■□□□□ 0.08
LETMD1-217ENST00000548516 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
LETMD1-217ENST00000548516 YEATS2Q9ULM3 1422 aa15.55■□□□□ 0.08
LETMD1-217ENST00000548516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.54■□□□□ 0.08
LETMD1-217ENST00000548516 MYT1LQ9UL68 1186 aa15.54■□□□□ 0.08
LETMD1-217ENST00000548516 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
LETMD1-217ENST00000548516 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
LETMD1-217ENST00000548516 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
LETMD1-217ENST00000548516 EFCAB2Q5VUJ9 269 aa15.51■□□□□ 0.07
LETMD1-217ENST00000548516 CDK13Q14004 1512 aaKnown RBP15.51■□□□□ 0.07
LETMD1-217ENST00000548516 ZFYVE16Q7Z3T8 1539 aa15.51■□□□□ 0.07
LETMD1-217ENST00000548516 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
LETMD1-217ENST00000548516 RICTORQ6R327 1708 aa15.49■□□□□ 0.07
LETMD1-217ENST00000548516 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms