RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRAFD1-205ENST00000548277 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
TRAFD1-205ENST00000548277 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
TRAFD1-205ENST00000548277 TTBK1Q5TCY1 1321 aaPredicted RBP21.03■□□□□ 0.96
TRAFD1-205ENST00000548277 IGF1RP08069 1367 aa20.98■□□□□ 0.95
TRAFD1-205ENST00000548277 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
TRAFD1-205ENST00000548277 ADCY10Q96PN6 1610 aa20.96■□□□□ 0.95
TRAFD1-205ENST00000548277 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
TRAFD1-205ENST00000548277 KIAA0586Q9BVV6 1533 aa20.93■□□□□ 0.94
TRAFD1-205ENST00000548277 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
TRAFD1-205ENST00000548277 CUL7Q14999 1698 aa20.92■□□□□ 0.94
TRAFD1-205ENST00000548277 DIP2BQ9P265 1576 aa20.89■□□□□ 0.93
TRAFD1-205ENST00000548277 MAPKBP1O60336 1514 aa20.87■□□□□ 0.93
TRAFD1-205ENST00000548277 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
TRAFD1-205ENST00000548277 PTPRGP23470 1445 aa20.83■□□□□ 0.93
TRAFD1-205ENST00000548277 KDM6BO15054 1643 aa20.79■□□□□ 0.92
TRAFD1-205ENST00000548277 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
TRAFD1-205ENST00000548277 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
TRAFD1-205ENST00000548277 IQGAP2Q13576 1575 aa20.72■□□□□ 0.91
TRAFD1-205ENST00000548277 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
TRAFD1-205ENST00000548277 ASXL2Q76L83 1435 aa20.68■□□□□ 0.9
TRAFD1-205ENST00000548277 ABCC2Q92887 1545 aa20.68■□□□□ 0.9
TRAFD1-205ENST00000548277 DISP1Q96F81 1524 aa20.64■□□□□ 0.9
TRAFD1-205ENST00000548277 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
TRAFD1-205ENST00000548277 PPRC1Q5VV67 1664 aaKnown RBP20.63■□□□□ 0.89
TRAFD1-205ENST00000548277 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
TRAFD1-205ENST00000548277 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
TRAFD1-205ENST00000548277 UHRF1BP1LA0JNW5 1464 aa20.58■□□□□ 0.89
TRAFD1-205ENST00000548277 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
TRAFD1-205ENST00000548277 GLI2P10070 1586 aa20.57■□□□□ 0.88
TRAFD1-205ENST00000548277 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
TRAFD1-205ENST00000548277 KIAA0556O60303 1618 aa20.55■□□□□ 0.88
TRAFD1-205ENST00000548277 CTTNBP2Q8WZ74 1663 aa20.53■□□□□ 0.88
TRAFD1-205ENST00000548277 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
TRAFD1-205ENST00000548277 KDM5BQ9UGL1 1544 aa20.52■□□□□ 0.87
TRAFD1-205ENST00000548277 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
TRAFD1-205ENST00000548277 MAP3K4Q9Y6R4 1608 aa20.5■□□□□ 0.87
TRAFD1-205ENST00000548277 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
TRAFD1-205ENST00000548277 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
TRAFD1-205ENST00000548277 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
TRAFD1-205ENST00000548277 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
TRAFD1-205ENST00000548277 P3H3Q8IVL6 736 aa20.42■□□□□ 0.86
TRAFD1-205ENST00000548277 WDR7Q9Y4E6 1490 aa20.41■□□□□ 0.86
TRAFD1-205ENST00000548277 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
TRAFD1-205ENST00000548277 ABCA8O94911 1581 aa20.36■□□□□ 0.85
TRAFD1-205ENST00000548277 CD109Q6YHK3 1445 aa20.36■□□□□ 0.85
TRAFD1-205ENST00000548277 CFAP43Q8NDM7 1665 aa20.34■□□□□ 0.85
TRAFD1-205ENST00000548277 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
TRAFD1-205ENST00000548277 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
TRAFD1-205ENST00000548277 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
TRAFD1-205ENST00000548277 ILDR1Q86SU0 546 aaPredicted RBP20.29■□□□□ 0.84
TRAFD1-205ENST00000548277 MAGI3Q5TCQ9 1506 aa20.27■□□□□ 0.83
TRAFD1-205ENST00000548277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.25■□□□□ 0.83
TRAFD1-205ENST00000548277 HNRNPUL2Q1KMD3 747 aaKnown RBP20.25■□□□□ 0.83
TRAFD1-205ENST00000548277 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
TRAFD1-205ENST00000548277 HECW2Q9P2P5 1572 aa20.23■□□□□ 0.83
TRAFD1-205ENST00000548277 KIF21BO75037 1637 aa20.23■□□□□ 0.83
TRAFD1-205ENST00000548277 ATP10BO94823 1461 aa20.23■□□□□ 0.83
TRAFD1-205ENST00000548277 RAPGEF3O95398 923 aa20.15■□□□□ 0.82
TRAFD1-205ENST00000548277 RAPGEF6Q8TEU7 1601 aa20.15■□□□□ 0.82
TRAFD1-205ENST00000548277 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
TRAFD1-205ENST00000548277 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
TRAFD1-205ENST00000548277 ARAP3Q8WWN8 1544 aa20.12■□□□□ 0.81
TRAFD1-205ENST00000548277 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
TRAFD1-205ENST00000548277 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
TRAFD1-205ENST00000548277 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
TRAFD1-205ENST00000548277 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
TRAFD1-205ENST00000548277 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
TRAFD1-205ENST00000548277 PHLDB1Q86UU1 1377 aa20.02■□□□□ 0.8
TRAFD1-205ENST00000548277 ADAMTSL3P82987 1691 aa20■□□□□ 0.79
TRAFD1-205ENST00000548277 NEO1Q92859 1461 aa20■□□□□ 0.79
TRAFD1-205ENST00000548277 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
TRAFD1-205ENST00000548277 FRMPD1Q5SYB0 1578 aa19.99■□□□□ 0.79
TRAFD1-205ENST00000548277 ATP1B4Q9UN42 357 aaPredicted RBP19.98■□□□□ 0.79
TRAFD1-205ENST00000548277 PTPRMP28827 1452 aa19.98■□□□□ 0.79
TRAFD1-205ENST00000548277 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
TRAFD1-205ENST00000548277 EEA1Q15075 1411 aa19.96■□□□□ 0.79
TRAFD1-205ENST00000548277 MADDQ8WXG6 1647 aa19.94■□□□□ 0.78
TRAFD1-205ENST00000548277 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
TRAFD1-205ENST00000548277 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
TRAFD1-205ENST00000548277 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
TRAFD1-205ENST00000548277 RIMS1Q86UR5 1692 aaKnown RBP19.92■□□□□ 0.78
TRAFD1-205ENST00000548277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRAFD1-205ENST00000548277 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
TRAFD1-205ENST00000548277 FANCAO15360 1455 aa19.9■□□□□ 0.78
TRAFD1-205ENST00000548277 CDK13Q14004 1512 aaKnown RBP19.9■□□□□ 0.78
TRAFD1-205ENST00000548277 TTC37Q6PGP7 1564 aa19.9■□□□□ 0.78
TRAFD1-205ENST00000548277 MLECQ14165 292 aa19.89■□□□□ 0.77
TRAFD1-205ENST00000548277 CFAP74Q9C0B2 1584 aa19.86■□□□□ 0.77
TRAFD1-205ENST00000548277 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
TRAFD1-205ENST00000548277 ARHGEF40Q8TER5 1519 aa19.85■□□□□ 0.77
TRAFD1-205ENST00000548277 SIGLEC1Q9BZZ2 1709 aa19.84■□□□□ 0.77
TRAFD1-205ENST00000548277 YEATS2Q9ULM3 1422 aa19.83■□□□□ 0.76
TRAFD1-205ENST00000548277 HSPA2P54652 639 aa19.82■□□□□ 0.76
TRAFD1-205ENST00000548277 FBXO41Q8TF61 875 aa19.82■□□□□ 0.76
TRAFD1-205ENST00000548277 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
TRAFD1-205ENST00000548277 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
TRAFD1-205ENST00000548277 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
TRAFD1-205ENST00000548277 HECW1Q76N89 1606 aa19.8■□□□□ 0.76
TRAFD1-205ENST00000548277 LMTK3Q96Q04 1460 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms