RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
CDK4-205ENST00000547853 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
CDK4-205ENST00000547853 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
CDK4-205ENST00000547853 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
CDK4-205ENST00000547853 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
CDK4-205ENST00000547853 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
CDK4-205ENST00000547853 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
CDK4-205ENST00000547853 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
CDK4-205ENST00000547853 PPRC1Q5VV67 1664 aaKnown RBP17.03■□□□□ 0.32
CDK4-205ENST00000547853 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
CDK4-205ENST00000547853 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
CDK4-205ENST00000547853 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
CDK4-205ENST00000547853 GLI2P10070 1586 aa16.89■□□□□ 0.3
CDK4-205ENST00000547853 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK4-205ENST00000547853 CUL7Q14999 1698 aa16.88■□□□□ 0.29
CDK4-205ENST00000547853 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
CDK4-205ENST00000547853 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
CDK4-205ENST00000547853 ABCC2Q92887 1545 aa16.83■□□□□ 0.28
CDK4-205ENST00000547853 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
CDK4-205ENST00000547853 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
CDK4-205ENST00000547853 PLB1Q6P1J6 1458 aa16.78■□□□□ 0.28
CDK4-205ENST00000547853 UHRF1BP1LA0JNW5 1464 aa16.74■□□□□ 0.27
CDK4-205ENST00000547853 PTPRGP23470 1445 aa16.73■□□□□ 0.27
CDK4-205ENST00000547853 ZCCHC11Q5TAX3 1644 aaKnown RBP16.73■□□□□ 0.27
CDK4-205ENST00000547853 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
CDK4-205ENST00000547853 IQGAP2Q13576 1575 aa16.72■□□□□ 0.27
CDK4-205ENST00000547853 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
CDK4-205ENST00000547853 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
CDK4-205ENST00000547853 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
CDK4-205ENST00000547853 IGF1RP08069 1367 aa16.66■□□□□ 0.26
CDK4-205ENST00000547853 KIF21BO75037 1637 aa16.66■□□□□ 0.26
CDK4-205ENST00000547853 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
CDK4-205ENST00000547853 CARMIL2Q6F5E8 1435 aa16.65■□□□□ 0.26
CDK4-205ENST00000547853 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
CDK4-205ENST00000547853 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
CDK4-205ENST00000547853 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
CDK4-205ENST00000547853 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
CDK4-205ENST00000547853 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.24
CDK4-205ENST00000547853 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
CDK4-205ENST00000547853 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
CDK4-205ENST00000547853 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
CDK4-205ENST00000547853 FBXO41Q8TF61 875 aa16.55■□□□□ 0.24
CDK4-205ENST00000547853 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
CDK4-205ENST00000547853 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
CDK4-205ENST00000547853 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
CDK4-205ENST00000547853 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
CDK4-205ENST00000547853 ABCA8O94911 1581 aa16.46■□□□□ 0.23
CDK4-205ENST00000547853 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
CDK4-205ENST00000547853 PTPRMP28827 1452 aa16.45■□□□□ 0.22
CDK4-205ENST00000547853 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
CDK4-205ENST00000547853 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
CDK4-205ENST00000547853 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
CDK4-205ENST00000547853 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
CDK4-205ENST00000547853 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CDK4-205ENST00000547853 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
CDK4-205ENST00000547853 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
CDK4-205ENST00000547853 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
CDK4-205ENST00000547853 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
CDK4-205ENST00000547853 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
CDK4-205ENST00000547853 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
CDK4-205ENST00000547853 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
CDK4-205ENST00000547853 SIGLEC1Q9BZZ2 1709 aa16.28■□□□□ 0.2
CDK4-205ENST00000547853 NEO1Q92859 1461 aa16.26■□□□□ 0.19
CDK4-205ENST00000547853 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
CDK4-205ENST00000547853 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
CDK4-205ENST00000547853 FER1L4A9Z1Z3 1794 aa16.21■□□□□ 0.19
CDK4-205ENST00000547853 ATP10BO94823 1461 aa16.21■□□□□ 0.19
CDK4-205ENST00000547853 TTC37Q6PGP7 1564 aa16.19■□□□□ 0.18
CDK4-205ENST00000547853 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
CDK4-205ENST00000547853 RAPGEF6Q8TEU7 1601 aa16.18■□□□□ 0.18
CDK4-205ENST00000547853 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
CDK4-205ENST00000547853 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
CDK4-205ENST00000547853 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
CDK4-205ENST00000547853 PREX1Q8TCU6 1659 aa16.16■□□□□ 0.18
CDK4-205ENST00000547853 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
CDK4-205ENST00000547853 HSPA2P54652 639 aa16.13■□□□□ 0.17
CDK4-205ENST00000547853 FANCAO15360 1455 aa16.13■□□□□ 0.17
CDK4-205ENST00000547853 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
CDK4-205ENST00000547853 ILDR2Q71H61 639 aa16.12■□□□□ 0.17
CDK4-205ENST00000547853 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
CDK4-205ENST00000547853 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
CDK4-205ENST00000547853 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
CDK4-205ENST00000547853 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
CDK4-205ENST00000547853 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
CDK4-205ENST00000547853 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
CDK4-205ENST00000547853 SOCS7O14512 581 aa16.09■□□□□ 0.17
CDK4-205ENST00000547853 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
CDK4-205ENST00000547853 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
CDK4-205ENST00000547853 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
CDK4-205ENST00000547853 NUP153P49790 1475 aaKnown RBP16.08■□□□□ 0.16
CDK4-205ENST00000547853 AKNAQ7Z591 1439 aa16.07■□□□□ 0.16
CDK4-205ENST00000547853 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
CDK4-205ENST00000547853 POGZQ7Z3K3 1410 aa16.06■□□□□ 0.16
CDK4-205ENST00000547853 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
CDK4-205ENST00000547853 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
CDK4-205ENST00000547853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK4-205ENST00000547853 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.15
CDK4-205ENST00000547853 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
CDK4-205ENST00000547853 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
CDK4-205ENST00000547853 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms