RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 MAP3K1Q13233 1512 aa26.34■■□□□ 1.81
TMTC3-202ENST00000547034 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
TMTC3-202ENST00000547034 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
TMTC3-202ENST00000547034 FHAD1B1AJZ9 1412 aa26.28■■□□□ 1.8
TMTC3-202ENST00000547034 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
TMTC3-202ENST00000547034 AQRO60306 1485 aaKnown RBP eCLIP26.26■■□□□ 1.79
TMTC3-202ENST00000547034 SAMD9Q5K651 1589 aa26.24■■□□□ 1.79
TMTC3-202ENST00000547034 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
TMTC3-202ENST00000547034 ZNF608Q9ULD9 1512 aaPredicted RBP26.2■■□□□ 1.79
TMTC3-202ENST00000547034 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.78
TMTC3-202ENST00000547034 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
TMTC3-202ENST00000547034 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
TMTC3-202ENST00000547034 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
TMTC3-202ENST00000547034 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
TMTC3-202ENST00000547034 FYCO1Q9BQS8 1478 aa26.16■■□□□ 1.78
TMTC3-202ENST00000547034 CASKIN1Q8WXD9 1431 aa26.13■■□□□ 1.77
TMTC3-202ENST00000547034 RRBP1Q9P2E9 1410 aaKnown RBP26.13■■□□□ 1.77
TMTC3-202ENST00000547034 FMN1Q68DA7 1419 aa26.1■■□□□ 1.77
TMTC3-202ENST00000547034 LRRC9Q6ZRR7 1453 aa26.08■■□□□ 1.77
TMTC3-202ENST00000547034 IQGAP2Q13576 1575 aa26.08■■□□□ 1.77
TMTC3-202ENST00000547034 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
TMTC3-202ENST00000547034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.07■■□□□ 1.76
TMTC3-202ENST00000547034 P3H3Q8IVL6 736 aa26.04■■□□□ 1.76
TMTC3-202ENST00000547034 MAGI1Q96QZ7 1491 aaPredicted RBP26.02■■□□□ 1.76
TMTC3-202ENST00000547034 CCER1Q8TC90 406 aaPredicted RBP26.02■■□□□ 1.76
TMTC3-202ENST00000547034 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
TMTC3-202ENST00000547034 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
TMTC3-202ENST00000547034 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.74
TMTC3-202ENST00000547034 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.74
TMTC3-202ENST00000547034 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.74
TMTC3-202ENST00000547034 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
TMTC3-202ENST00000547034 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
TMTC3-202ENST00000547034 PHLDB1Q86UU1 1377 aa25.85■■□□□ 1.73
TMTC3-202ENST00000547034 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
TMTC3-202ENST00000547034 HECW1Q76N89 1606 aa25.82■■□□□ 1.72
TMTC3-202ENST00000547034 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
TMTC3-202ENST00000547034 DISP1Q96F81 1524 aa25.81■■□□□ 1.72
TMTC3-202ENST00000547034 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
TMTC3-202ENST00000547034 NUP160Q12769 1436 aa25.79■■□□□ 1.72
TMTC3-202ENST00000547034 ATP1B4Q9UN42 357 aaPredicted RBP25.77■■□□□ 1.72
TMTC3-202ENST00000547034 EHBP1L1Q8N3D4 1523 aa25.76■■□□□ 1.72
TMTC3-202ENST00000547034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.76■■□□□ 1.71
TMTC3-202ENST00000547034 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
TMTC3-202ENST00000547034 MTUS2Q5JR59 1369 aa25.71■■□□□ 1.71
TMTC3-202ENST00000547034 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
TMTC3-202ENST00000547034 ARHGEF11O15085 1522 aa25.69■■□□□ 1.7
TMTC3-202ENST00000547034 EPRSP07814 1512 aaKnown RBP25.69■■□□□ 1.7
TMTC3-202ENST00000547034 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
TMTC3-202ENST00000547034 NCOA2Q15596 1464 aa25.65■■□□□ 1.7
TMTC3-202ENST00000547034 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
TMTC3-202ENST00000547034 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
TMTC3-202ENST00000547034 DHX57Q6P158 1386 aaKnown RBP25.63■■□□□ 1.69
TMTC3-202ENST00000547034 RAPGEF6Q8TEU7 1601 aa25.62■■□□□ 1.69
TMTC3-202ENST00000547034 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
TMTC3-202ENST00000547034 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
TMTC3-202ENST00000547034 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
TMTC3-202ENST00000547034 CARMIL2Q6F5E8 1435 aa25.55■■□□□ 1.68
TMTC3-202ENST00000547034 SETD5Q9C0A6 1442 aa25.53■■□□□ 1.68
TMTC3-202ENST00000547034 FBLN2P98095 1184 aa25.53■■□□□ 1.68
TMTC3-202ENST00000547034 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
TMTC3-202ENST00000547034 JPH4Q96JJ6 628 aa25.51■■□□□ 1.67
TMTC3-202ENST00000547034 RAB3GAP2Q9H2M9 1393 aa25.51■■□□□ 1.67
TMTC3-202ENST00000547034 CHD1O14646 1710 aa25.51■■□□□ 1.67
TMTC3-202ENST00000547034 ITGAEP38570 1179 aa25.49■■□□□ 1.67
TMTC3-202ENST00000547034 TCOF1Q13428 1488 aaKnown RBP25.49■■□□□ 1.67
TMTC3-202ENST00000547034 PTPN23Q9H3S7 1636 aa25.49■■□□□ 1.67
TMTC3-202ENST00000547034 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
TMTC3-202ENST00000547034 ABCA8O94911 1581 aa25.43■■□□□ 1.66
TMTC3-202ENST00000547034 PLB1Q6P1J6 1458 aa25.42■■□□□ 1.66
TMTC3-202ENST00000547034 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
TMTC3-202ENST00000547034 PTPRKQ15262 1439 aa25.38■■□□□ 1.65
TMTC3-202ENST00000547034 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
TMTC3-202ENST00000547034 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
TMTC3-202ENST00000547034 HFM1A2PYH4 1435 aa25.37■■□□□ 1.65
TMTC3-202ENST00000547034 TROQ12816 1431 aaPredicted RBP25.35■■□□□ 1.65
TMTC3-202ENST00000547034 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
TMTC3-202ENST00000547034 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
TMTC3-202ENST00000547034 AKNAQ7Z591 1439 aa25.3■■□□□ 1.64
TMTC3-202ENST00000547034 ARID3CA6NKF2 412 aa25.28■■□□□ 1.64
TMTC3-202ENST00000547034 NAIPQ13075 1403 aa25.27■■□□□ 1.64
TMTC3-202ENST00000547034 GCC2Q8IWJ2 1684 aa25.27■■□□□ 1.64
TMTC3-202ENST00000547034 ITSN2Q9NZM3 1697 aa25.25■■□□□ 1.63
TMTC3-202ENST00000547034 CLASP1Q7Z460 1538 aa25.24■■□□□ 1.63
TMTC3-202ENST00000547034 ATP10BO94823 1461 aa25.23■■□□□ 1.63
TMTC3-202ENST00000547034 PTPRGP23470 1445 aa25.22■■□□□ 1.63
TMTC3-202ENST00000547034 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
TMTC3-202ENST00000547034 KIF14Q15058 1648 aa25.22■■□□□ 1.63
TMTC3-202ENST00000547034 ZNF316A6NFI3 1004 aaPredicted RBP25.21■■□□□ 1.63
TMTC3-202ENST00000547034 UACAQ9BZF9 1416 aa25.18■■□□□ 1.62
TMTC3-202ENST00000547034 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
TMTC3-202ENST00000547034 DAPK1P53355 1430 aa25.15■■□□□ 1.62
TMTC3-202ENST00000547034 ABCC10Q5T3U5 1492 aa25.14■■□□□ 1.62
TMTC3-202ENST00000547034 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
TMTC3-202ENST00000547034 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
TMTC3-202ENST00000547034 ABCC5O15440 1437 aa25.11■■□□□ 1.61
TMTC3-202ENST00000547034 CDC42BPAQ5VT25 1732 aa25.11■■□□□ 1.61
TMTC3-202ENST00000547034 CAMSAP2Q08AD1 1489 aa25.1■■□□□ 1.61
TMTC3-202ENST00000547034 PLEKHD1A6NEE1 506 aa25.08■■□□□ 1.61
TMTC3-202ENST00000547034 ABCC2Q92887 1545 aa25.08■■□□□ 1.6
TMTC3-202ENST00000547034 DIEXFQ68CQ4 756 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms