RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRIM1-202ENST00000546761 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
PRIM1-202ENST00000546761 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
PRIM1-202ENST00000546761 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
PRIM1-202ENST00000546761 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
PRIM1-202ENST00000546761 BAZ1AQ9NRL2 1556 aaPredicted RBP9.06□□□□□ -0.96
PRIM1-202ENST00000546761 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
PRIM1-202ENST00000546761 SMARCA4P51532 1647 aa9.02□□□□□ -0.97
PRIM1-202ENST00000546761 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
PRIM1-202ENST00000546761 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
PRIM1-202ENST00000546761 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
PRIM1-202ENST00000546761 MIER1Q8N108 512 aa8.97□□□□□ -0.97
PRIM1-202ENST00000546761 EIF4G1Q04637 1599 aaKnown RBP8.96□□□□□ -0.97
PRIM1-202ENST00000546761 MROH2BQ7Z745 1585 aa8.96□□□□□ -0.97
PRIM1-202ENST00000546761 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
PRIM1-202ENST00000546761 PEG3Q9GZU2 1588 aa8.95□□□□□ -0.98
PRIM1-202ENST00000546761 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
PRIM1-202ENST00000546761 PROM2Q8N271 834 aa8.93□□□□□ -0.98
PRIM1-202ENST00000546761 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
PRIM1-202ENST00000546761 WIZO95785 1651 aa8.91□□□□□ -0.98
PRIM1-202ENST00000546761 PLCD3Q8N3E9 789 aa8.91□□□□□ -0.98
PRIM1-202ENST00000546761 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
PRIM1-202ENST00000546761 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
PRIM1-202ENST00000546761 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
PRIM1-202ENST00000546761 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
PRIM1-202ENST00000546761 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
PRIM1-202ENST00000546761 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
PRIM1-202ENST00000546761 OTUD5Q96G74 571 aa8.86□□□□□ -0.99
PRIM1-202ENST00000546761 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
PRIM1-202ENST00000546761 CC2D2AQ9P2K1 1620 aa8.86□□□□□ -0.99
PRIM1-202ENST00000546761 TOP2AP11388 1531 aaKnown RBP8.85□□□□□ -0.99
PRIM1-202ENST00000546761 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
PRIM1-202ENST00000546761 POTEB2H3BUK9 544 aa8.85□□□□□ -0.99
PRIM1-202ENST00000546761 C7P10643 843 aa8.85□□□□□ -0.99
PRIM1-202ENST00000546761 ASTLQ6HA08 431 aaPredicted RBP8.85□□□□□ -0.99
PRIM1-202ENST00000546761 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
PRIM1-202ENST00000546761 KIF12Q96FN5 646 aa8.83□□□□□ -1
PRIM1-202ENST00000546761 RTN4Q9NQC3 1192 aaKnown RBP8.83□□□□□ -1
PRIM1-202ENST00000546761 NCAPD3P42695 1498 aa8.83□□□□□ -1
PRIM1-202ENST00000546761 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
PRIM1-202ENST00000546761 RASEFQ8IZ41 740 aa8.81□□□□□ -1
PRIM1-202ENST00000546761 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
PRIM1-202ENST00000546761 MAP3K13O43283 966 aa8.8□□□□□ -1
PRIM1-202ENST00000546761 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
PRIM1-202ENST00000546761 FKBP8Q14318 412 aa8.79□□□□□ -1
PRIM1-202ENST00000546761 MAMSTRQ6ZN01 415 aa8.79□□□□□ -1
PRIM1-202ENST00000546761 SCUBE2Q9NQ36 999 aa8.76□□□□□ -1.01
PRIM1-202ENST00000546761 BMP2KQ9NSY1 1161 aaPredicted RBP8.76□□□□□ -1.01
PRIM1-202ENST00000546761 SEC24BO95487 1268 aa8.75□□□□□ -1.01
PRIM1-202ENST00000546761 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
PRIM1-202ENST00000546761 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
PRIM1-202ENST00000546761 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
PRIM1-202ENST00000546761 TIE1P35590 1138 aa8.73□□□□□ -1.01
PRIM1-202ENST00000546761 POTEMA6NI47 508 aa8.72□□□□□ -1.01
PRIM1-202ENST00000546761 FAM212AQ96EL1 285 aa8.72□□□□□ -1.01
PRIM1-202ENST00000546761 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
PRIM1-202ENST00000546761 POTEGQ6S5H5 508 aa8.7□□□□□ -1.02
PRIM1-202ENST00000546761 POTEJP0CG39 1038 aa8.69□□□□□ -1.02
PRIM1-202ENST00000546761 FAM163AQ96GL9 167 aaPredicted RBP8.69□□□□□ -1.02
PRIM1-202ENST00000546761 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
PRIM1-202ENST00000546761 NUBP1P53384 320 aa8.68□□□□□ -1.02
PRIM1-202ENST00000546761 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
PRIM1-202ENST00000546761 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
PRIM1-202ENST00000546761 SGIP1Q9BQI5 828 aa8.66□□□□□ -1.02
PRIM1-202ENST00000546761 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
PRIM1-202ENST00000546761 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
PRIM1-202ENST00000546761 IFNL1Q8IU54 200 aa8.64□□□□□ -1.03
PRIM1-202ENST00000546761 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
PRIM1-202ENST00000546761 POTEFA5A3E0 1075 aa8.63□□□□□ -1.03
PRIM1-202ENST00000546761 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
PRIM1-202ENST00000546761 KLHL34Q8N239 644 aa8.62□□□□□ -1.03
PRIM1-202ENST00000546761 PYGBP11216 843 aa8.6□□□□□ -1.03
PRIM1-202ENST00000546761 IER5LQ5T953 404 aa8.6□□□□□ -1.03
PRIM1-202ENST00000546761 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
PRIM1-202ENST00000546761 PLCG2P16885 1265 aa8.59□□□□□ -1.03
PRIM1-202ENST00000546761 CFTRP13569 1480 aa8.58□□□□□ -1.04
PRIM1-202ENST00000546761 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
PRIM1-202ENST00000546761 PCDH10Q9P2E7 1040 aa8.56□□□□□ -1.04
PRIM1-202ENST00000546761 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
PRIM1-202ENST00000546761 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
PRIM1-202ENST00000546761 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
PRIM1-202ENST00000546761 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
PRIM1-202ENST00000546761 GSE1Q14687 1217 aa8.51□□□□□ -1.05
PRIM1-202ENST00000546761 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
PRIM1-202ENST00000546761 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
PRIM1-202ENST00000546761 NESP48681 1621 aa8.48□□□□□ -1.05
PRIM1-202ENST00000546761 OCEL1Q9H607 264 aa8.48□□□□□ -1.05
PRIM1-202ENST00000546761 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
PRIM1-202ENST00000546761 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
PRIM1-202ENST00000546761 IRX5P78411 483 aaPredicted RBP8.47□□□□□ -1.05
PRIM1-202ENST00000546761 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
PRIM1-202ENST00000546761 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
PRIM1-202ENST00000546761 WRNQ14191 1432 aaPredicted RBP eCLIP8.46□□□□□ -1.05
PRIM1-202ENST00000546761 CEP164Q9UPV0 1460 aa8.46□□□□□ -1.05
PRIM1-202ENST00000546761 ZNF467Q7Z7K2 595 aaPredicted RBP8.46□□□□□ -1.06
PRIM1-202ENST00000546761 TOP2BQ02880 1626 aa8.45□□□□□ -1.06
PRIM1-202ENST00000546761 MKRN3Q13064 507 aaKnown RBP8.45□□□□□ -1.06
PRIM1-202ENST00000546761 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
PRIM1-202ENST00000546761 CDAN1Q8IWY9 1227 aa8.43□□□□□ -1.06
PRIM1-202ENST00000546761 TRIM41Q8WV44 630 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms