RNA–Protein interactions for RNA: ENST00000546748.1

ERBB3-204, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-204ENST00000546748 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
ERBB3-204ENST00000546748 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
ERBB3-204ENST00000546748 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
ERBB3-204ENST00000546748 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
ERBB3-204ENST00000546748 FMN1Q68DA7 1419 aa11.77□□□□□ -0.53
ERBB3-204ENST00000546748 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.535e-6■■□□□ 11.6
ERBB3-204ENST00000546748 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
ERBB3-204ENST00000546748 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
ERBB3-204ENST00000546748 FHOD3Q2V2M9 1422 aa11.75□□□□□ -0.53
ERBB3-204ENST00000546748 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
ERBB3-204ENST00000546748 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
ERBB3-204ENST00000546748 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
ERBB3-204ENST00000546748 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
ERBB3-204ENST00000546748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
ERBB3-204ENST00000546748 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
ERBB3-204ENST00000546748 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
ERBB3-204ENST00000546748 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
ERBB3-204ENST00000546748 ZNF608Q9ULD9 1512 aaPredicted RBP11.71□□□□□ -0.53
ERBB3-204ENST00000546748 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.53
ERBB3-204ENST00000546748 LRRC9Q6ZRR7 1453 aa11.7□□□□□ -0.54
ERBB3-204ENST00000546748 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
ERBB3-204ENST00000546748 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
ERBB3-204ENST00000546748 IQGAP2Q13576 1575 aa11.7□□□□□ -0.54
ERBB3-204ENST00000546748 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
ERBB3-204ENST00000546748 MAGI1Q96QZ7 1491 aaPredicted RBP11.69□□□□□ -0.54
ERBB3-204ENST00000546748 ATP1B4Q9UN42 357 aaPredicted RBP11.68□□□□□ -0.54
ERBB3-204ENST00000546748 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
ERBB3-204ENST00000546748 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
ERBB3-204ENST00000546748 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.55
ERBB3-204ENST00000546748 UGGT2Q9NYU1 1516 aa11.65□□□□□ -0.55
ERBB3-204ENST00000546748 GRIN2AQ12879 1464 aa11.64□□□□□ -0.55
ERBB3-204ENST00000546748 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
ERBB3-204ENST00000546748 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
ERBB3-204ENST00000546748 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
ERBB3-204ENST00000546748 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
ERBB3-204ENST00000546748 HECW1Q76N89 1606 aa11.6□□□□□ -0.55
ERBB3-204ENST00000546748 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
ERBB3-204ENST00000546748 CLSPNQ9HAW4 1339 aa11.58□□□□□ -0.56
ERBB3-204ENST00000546748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.56
ERBB3-204ENST00000546748 EHBP1L1Q8N3D4 1523 aa11.57□□□□□ -0.56
ERBB3-204ENST00000546748 KIAA0556O60303 1618 aa11.56□□□□□ -0.56
ERBB3-204ENST00000546748 NUP160Q12769 1436 aa11.55□□□□□ -0.56
ERBB3-204ENST00000546748 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
ERBB3-204ENST00000546748 FBLN2P98095 1184 aa11.54□□□□□ -0.56
ERBB3-204ENST00000546748 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
ERBB3-204ENST00000546748 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
ERBB3-204ENST00000546748 CEP170Q5SW79 1584 aa11.53□□□□□ -0.56
ERBB3-204ENST00000546748 FGD6Q6ZV73 1430 aa11.52□□□□□ -0.56
ERBB3-204ENST00000546748 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.56
ERBB3-204ENST00000546748 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
ERBB3-204ENST00000546748 ITGAEP38570 1179 aa11.52□□□□□ -0.57
ERBB3-204ENST00000546748 NCOA2Q15596 1464 aa11.51□□□□□ -0.57
ERBB3-204ENST00000546748 MYOM3Q5VTT5 1437 aa11.51□□□□□ -0.57
ERBB3-204ENST00000546748 DHX57Q6P158 1386 aaKnown RBP11.5□□□□□ -0.57
ERBB3-204ENST00000546748 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
ERBB3-204ENST00000546748 SETD5Q9C0A6 1442 aa11.49□□□□□ -0.57
ERBB3-204ENST00000546748 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
ERBB3-204ENST00000546748 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
ERBB3-204ENST00000546748 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
ERBB3-204ENST00000546748 ARHGEF11O15085 1522 aa11.47□□□□□ -0.57
ERBB3-204ENST00000546748 RAB3GAP2Q9H2M9 1393 aa11.47□□□□□ -0.57
ERBB3-204ENST00000546748 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
ERBB3-204ENST00000546748 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
ERBB3-204ENST00000546748 NUP153P49790 1475 aaKnown RBP11.44□□□□□ -0.58
ERBB3-204ENST00000546748 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
ERBB3-204ENST00000546748 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
ERBB3-204ENST00000546748 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
ERBB3-204ENST00000546748 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
ERBB3-204ENST00000546748 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
ERBB3-204ENST00000546748 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
ERBB3-204ENST00000546748 ARID3CA6NKF2 412 aa11.39□□□□□ -0.59
ERBB3-204ENST00000546748 PRG4Q92954 1404 aaPredicted RBP11.39□□□□□ -0.59
ERBB3-204ENST00000546748 CHD1O14646 1710 aa11.38□□□□□ -0.59
ERBB3-204ENST00000546748 ABCA8O94911 1581 aa11.37□□□□□ -0.59
ERBB3-204ENST00000546748 PTPRGP23470 1445 aa11.37□□□□□ -0.59
ERBB3-204ENST00000546748 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
ERBB3-204ENST00000546748 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-204ENST00000546748 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
ERBB3-204ENST00000546748 PLEKHD1A6NEE1 506 aa11.34□□□□□ -0.59
ERBB3-204ENST00000546748 SHROOM2Q13796 1616 aa11.34□□□□□ -0.59
ERBB3-204ENST00000546748 NAIPQ13075 1403 aa11.34□□□□□ -0.59
ERBB3-204ENST00000546748 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
ERBB3-204ENST00000546748 ADCY10Q96PN6 1610 aa11.33□□□□□ -0.6
ERBB3-204ENST00000546748 MAPKBP1O60336 1514 aa11.33□□□□□ -0.6
ERBB3-204ENST00000546748 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
ERBB3-204ENST00000546748 ITSN2Q9NZM3 1697 aa11.32□□□□□ -0.6
ERBB3-204ENST00000546748 UACAQ9BZF9 1416 aa11.32□□□□□ -0.6
ERBB3-204ENST00000546748 DIEXFQ68CQ4 756 aaKnown RBP11.31□□□□□ -0.6
ERBB3-204ENST00000546748 ATP10BO94823 1461 aa11.31□□□□□ -0.6
ERBB3-204ENST00000546748 ROCK1Q13464 1354 aa11.3□□□□□ -0.6
ERBB3-204ENST00000546748 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
ERBB3-204ENST00000546748 KIF14Q15058 1648 aa11.3□□□□□ -0.6
ERBB3-204ENST00000546748 DAPK1P53355 1430 aa11.29□□□□□ -0.6
ERBB3-204ENST00000546748 GCC2Q8IWJ2 1684 aa11.29□□□□□ -0.6
ERBB3-204ENST00000546748 DNMT1P26358 1616 aaKnown RBP11.28□□□□□ -0.6
ERBB3-204ENST00000546748 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
ERBB3-204ENST00000546748 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
ERBB3-204ENST00000546748 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.61
ERBB3-204ENST00000546748 CHIC2Q9UKJ5 165 aa11.27□□□□□ -0.61
ERBB3-204ENST00000546748 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms