RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
COPA-207ENST00000545284 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
COPA-207ENST00000545284 ERICH3Q5RHP9 1530 aa13.38□□□□□ -0.27
COPA-207ENST00000545284 KDM6BO15054 1643 aa13.35□□□□□ -0.27
COPA-207ENST00000545284 DIP2BQ9P265 1576 aa13.35□□□□□ -0.27
COPA-207ENST00000545284 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
COPA-207ENST00000545284 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
COPA-207ENST00000545284 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
COPA-207ENST00000545284 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
COPA-207ENST00000545284 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
COPA-207ENST00000545284 PLB1Q6P1J6 1458 aa13.22□□□□□ -0.29
COPA-207ENST00000545284 PTPRGP23470 1445 aa13.21□□□□□ -0.3
COPA-207ENST00000545284 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
COPA-207ENST00000545284 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
COPA-207ENST00000545284 GLI2P10070 1586 aa13.19□□□□□ -0.3
COPA-207ENST00000545284 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
COPA-207ENST00000545284 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
COPA-207ENST00000545284 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
COPA-207ENST00000545284 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
COPA-207ENST00000545284 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
COPA-207ENST00000545284 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
COPA-207ENST00000545284 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
COPA-207ENST00000545284 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
COPA-207ENST00000545284 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
COPA-207ENST00000545284 IGF1RP08069 1367 aa13.12□□□□□ -0.31
COPA-207ENST00000545284 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
COPA-207ENST00000545284 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
COPA-207ENST00000545284 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
COPA-207ENST00000545284 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
COPA-207ENST00000545284 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
COPA-207ENST00000545284 CUL7Q14999 1698 aa13.02□□□□□ -0.32
COPA-207ENST00000545284 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
COPA-207ENST00000545284 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
COPA-207ENST00000545284 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
COPA-207ENST00000545284 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
COPA-207ENST00000545284 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
COPA-207ENST00000545284 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.34
COPA-207ENST00000545284 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
COPA-207ENST00000545284 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
COPA-207ENST00000545284 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
COPA-207ENST00000545284 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
COPA-207ENST00000545284 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
COPA-207ENST00000545284 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
COPA-207ENST00000545284 PTPRMP28827 1452 aa12.9□□□□□ -0.34
COPA-207ENST00000545284 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
COPA-207ENST00000545284 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
COPA-207ENST00000545284 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
COPA-207ENST00000545284 CFAP43Q8NDM7 1665 aa12.86□□□□□ -0.35
COPA-207ENST00000545284 SOCS7O14512 581 aa12.85□□□□□ -0.35
COPA-207ENST00000545284 FAM9AQ8IZU1 332 aaPredicted RBP12.84□□□□□ -0.35
COPA-207ENST00000545284 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
COPA-207ENST00000545284 RAPGEF2Q9Y4G8 1499 aa12.83□□□□□ -0.36
COPA-207ENST00000545284 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
COPA-207ENST00000545284 ADAMTSL3P82987 1691 aa12.81□□□□□ -0.36
COPA-207ENST00000545284 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
COPA-207ENST00000545284 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
COPA-207ENST00000545284 KIF21BO75037 1637 aa12.79□□□□□ -0.36
COPA-207ENST00000545284 NEO1Q92859 1461 aa12.77□□□□□ -0.37
COPA-207ENST00000545284 RAPGEF3O95398 923 aa12.76□□□□□ -0.37
COPA-207ENST00000545284 ARID4BQ4LE39 1312 aaPredicted RBP12.76□□□□□ -0.37
COPA-207ENST00000545284 ABCA8O94911 1581 aa12.76□□□□□ -0.37
COPA-207ENST00000545284 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
COPA-207ENST00000545284 ILDR2Q71H61 639 aa12.73□□□□□ -0.37
COPA-207ENST00000545284 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
COPA-207ENST00000545284 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.37
COPA-207ENST00000545284 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.37
COPA-207ENST00000545284 HSPA2P54652 639 aa12.7□□□□□ -0.38
COPA-207ENST00000545284 ATP10BO94823 1461 aa12.69□□□□□ -0.38
COPA-207ENST00000545284 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
COPA-207ENST00000545284 MADDQ8WXG6 1647 aa12.68□□□□□ -0.38
COPA-207ENST00000545284 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
COPA-207ENST00000545284 FANCAO15360 1455 aa12.65□□□□□ -0.38
COPA-207ENST00000545284 AKNAQ7Z591 1439 aa12.64□□□□□ -0.39
COPA-207ENST00000545284 YEATS2Q9ULM3 1422 aa12.64□□□□□ -0.39
COPA-207ENST00000545284 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
COPA-207ENST00000545284 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
COPA-207ENST00000545284 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
COPA-207ENST00000545284 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
COPA-207ENST00000545284 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
COPA-207ENST00000545284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
COPA-207ENST00000545284 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
COPA-207ENST00000545284 RIMS1Q86UR5 1692 aaKnown RBP12.58□□□□□ -0.4
COPA-207ENST00000545284 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
COPA-207ENST00000545284 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
COPA-207ENST00000545284 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
COPA-207ENST00000545284 ZMYM4Q5VZL5 1548 aa12.57□□□□□ -0.4
COPA-207ENST00000545284 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
COPA-207ENST00000545284 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
COPA-207ENST00000545284 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
COPA-207ENST00000545284 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
COPA-207ENST00000545284 PTPRTO14522 1441 aa12.54□□□□□ -0.4
COPA-207ENST00000545284 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
COPA-207ENST00000545284 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
COPA-207ENST00000545284 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
COPA-207ENST00000545284 CFAP74Q9C0B2 1584 aa12.52□□□□□ -0.4
COPA-207ENST00000545284 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
COPA-207ENST00000545284 MLECQ14165 292 aa12.51□□□□□ -0.41
COPA-207ENST00000545284 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
COPA-207ENST00000545284 ATP10AO60312 1499 aa12.51□□□□□ -0.41
COPA-207ENST00000545284 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms