RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 HSP90AA2PQ14568 343 aaPredicted RBP11.37□□□□□ -0.59
ATXN3-216ENST00000545170 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
ATXN3-216ENST00000545170 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
ATXN3-216ENST00000545170 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-216ENST00000545170 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
ATXN3-216ENST00000545170 ZBTB7CA1YPR0 619 aa11.33□□□□□ -0.6
ATXN3-216ENST00000545170 TMC1Q8TDI8 760 aa11.33□□□□□ -0.6
ATXN3-216ENST00000545170 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
ATXN3-216ENST00000545170 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
ATXN3-216ENST00000545170 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
ATXN3-216ENST00000545170 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
ATXN3-216ENST00000545170 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
ATXN3-216ENST00000545170 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
ATXN3-216ENST00000545170 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
ATXN3-216ENST00000545170 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
ATXN3-216ENST00000545170 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
ATXN3-216ENST00000545170 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
ATXN3-216ENST00000545170 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
ATXN3-216ENST00000545170 DCAF1Q9Y4B6 1507 aa11.26□□□□□ -0.61
ATXN3-216ENST00000545170 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
ATXN3-216ENST00000545170 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATXN3-216ENST00000545170 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
ATXN3-216ENST00000545170 DRC7Q8IY82 874 aa11.21□□□□□ -0.61
ATXN3-216ENST00000545170 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.62
ATXN3-216ENST00000545170 NRDCO43847 1150 aa11.2□□□□□ -0.62
ATXN3-216ENST00000545170 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
ATXN3-216ENST00000545170 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
ATXN3-216ENST00000545170 CASC1Q6TDU7 716 aa11.18□□□□□ -0.62
ATXN3-216ENST00000545170 APPP05067 770 aa11.18□□□□□ -0.62
ATXN3-216ENST00000545170 RGS3P49796 1198 aa11.18□□□□□ -0.62
ATXN3-216ENST00000545170 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-216ENST00000545170 PTMSP20962 102 aa11.18□□□□□ -0.62
ATXN3-216ENST00000545170 HIRIP3Q9BW71 556 aaPredicted RBP11.17□□□□□ -0.62
ATXN3-216ENST00000545170 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
ATXN3-216ENST00000545170 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-216ENST00000545170 GOLGA6L3A6NEY3 463 aa11.15□□□□□ -0.62
ATXN3-216ENST00000545170 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
ATXN3-216ENST00000545170 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.63
ATXN3-216ENST00000545170 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
ATXN3-216ENST00000545170 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
ATXN3-216ENST00000545170 GOLGA6L1Q8N7Z2 621 aa11.11□□□□□ -0.63
ATXN3-216ENST00000545170 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-216ENST00000545170 NOC3LQ8WTT2 800 aaKnown RBP11.08□□□□□ -0.64
ATXN3-216ENST00000545170 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
ATXN3-216ENST00000545170 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
ATXN3-216ENST00000545170 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
ATXN3-216ENST00000545170 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
ATXN3-216ENST00000545170 FTSJ3Q8IY81 847 aaKnown RBP11.05□□□□□ -0.64
ATXN3-216ENST00000545170 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
ATXN3-216ENST00000545170 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-216ENST00000545170 FAM13BQ9NYF5 915 aa11.01□□□□□ -0.65
ATXN3-216ENST00000545170 GSE1Q14687 1217 aa11.01□□□□□ -0.65
ATXN3-216ENST00000545170 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
ATXN3-216ENST00000545170 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
ATXN3-216ENST00000545170 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
ATXN3-216ENST00000545170 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
ATXN3-216ENST00000545170 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-216ENST00000545170 FRAT1Q92837 279 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-216ENST00000545170 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
ATXN3-216ENST00000545170 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
ATXN3-216ENST00000545170 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
ATXN3-216ENST00000545170 FGD1P98174 961 aa10.94□□□□□ -0.66
ATXN3-216ENST00000545170 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
ATXN3-216ENST00000545170 TCERG1O14776 1098 aaKnown RBP10.93□□□□□ -0.66
ATXN3-216ENST00000545170 NOM1Q5C9Z4 860 aaKnown RBP10.93□□□□□ -0.66
ATXN3-216ENST00000545170 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
ATXN3-216ENST00000545170 TAF7LQ5H9L4 462 aa10.92□□□□□ -0.66
ATXN3-216ENST00000545170 MCCP23508 829 aa10.91□□□□□ -0.66
ATXN3-216ENST00000545170 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
ATXN3-216ENST00000545170 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
ATXN3-216ENST00000545170 KCNJ4P48050 445 aa10.91□□□□□ -0.66
ATXN3-216ENST00000545170 TPM4P67936 248 aa10.9□□□□□ -0.66
ATXN3-216ENST00000545170 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.67
ATXN3-216ENST00000545170 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-216ENST00000545170 GPS2Q13227 327 aa10.89□□□□□ -0.67
ATXN3-216ENST00000545170 DDX11L8A8MPP1 907 aa10.88□□□□□ -0.67
ATXN3-216ENST00000545170 FAM43AQ8N2R8 423 aa10.87□□□□□ -0.67
ATXN3-216ENST00000545170 NEUROD2Q15784 382 aa10.86□□□□□ -0.67
ATXN3-216ENST00000545170 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
ATXN3-216ENST00000545170 PHF14O94880 888 aa10.86□□□□□ -0.67
ATXN3-216ENST00000545170 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
ATXN3-216ENST00000545170 CHIC2Q9UKJ5 165 aa10.86□□□□□ -0.67
ATXN3-216ENST00000545170 NCBP3Q53F19 620 aaKnown RBP10.85□□□□□ -0.67
ATXN3-216ENST00000545170 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
ATXN3-216ENST00000545170 ZNF592Q92610 1267 aa10.85□□□□□ -0.67
ATXN3-216ENST00000545170 MAP7D2Q96T17 732 aa10.85□□□□□ -0.67
ATXN3-216ENST00000545170 CCDC66A2RUB6 948 aa10.85□□□□□ -0.67
ATXN3-216ENST00000545170 CCAR2Q8N163 923 aaKnown RBP10.85□□□□□ -0.67
ATXN3-216ENST00000545170 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
ATXN3-216ENST00000545170 MS4A1P11836 297 aa10.84□□□□□ -0.67
ATXN3-216ENST00000545170 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
ATXN3-216ENST00000545170 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
ATXN3-216ENST00000545170 MFAP1P55081 439 aaKnown RBP10.83□□□□□ -0.68
ATXN3-216ENST00000545170 TPM2P07951 284 aa10.83□□□□□ -0.68
ATXN3-216ENST00000545170 PDE4CQ08493 712 aa10.83□□□□□ -0.68
ATXN3-216ENST00000545170 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
ATXN3-216ENST00000545170 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
ATXN3-216ENST00000545170 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
ATXN3-216ENST00000545170 CLSTN1O94985 981 aa10.83□□□□□ -0.68
ATXN3-216ENST00000545170 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms