RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
CHD4-212ENST00000545083 KDM4FA0A1W2PPD8 638 aa17.11■□□□□ 0.33
CHD4-212ENST00000545083 MAPKBP1O60336 1514 aa17.09■□□□□ 0.33
CHD4-212ENST00000545083 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
CHD4-212ENST00000545083 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
CHD4-212ENST00000545083 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHD4-212ENST00000545083 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
CHD4-212ENST00000545083 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
CHD4-212ENST00000545083 KDM6BO15054 1643 aa17.03■□□□□ 0.32
CHD4-212ENST00000545083 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
CHD4-212ENST00000545083 TSPOAP1O95153 1857 aa16.95■□□□□ 0.3
CHD4-212ENST00000545083 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
CHD4-212ENST00000545083 IGF1RP08069 1367 aa16.89■□□□□ 0.29
CHD4-212ENST00000545083 PTPRGP23470 1445 aa16.87■□□□□ 0.29
CHD4-212ENST00000545083 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
CHD4-212ENST00000545083 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
CHD4-212ENST00000545083 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
CHD4-212ENST00000545083 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
CHD4-212ENST00000545083 ABCC2Q92887 1545 aa16.83■□□□□ 0.28
CHD4-212ENST00000545083 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
CHD4-212ENST00000545083 GLI2P10070 1586 aa16.81■□□□□ 0.28
CHD4-212ENST00000545083 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
CHD4-212ENST00000545083 CUL7Q14999 1698 aa16.8■□□□□ 0.28
CHD4-212ENST00000545083 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
CHD4-212ENST00000545083 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
CHD4-212ENST00000545083 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
CHD4-212ENST00000545083 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
CHD4-212ENST00000545083 UHRF1BP1LA0JNW5 1464 aa16.74■□□□□ 0.27
CHD4-212ENST00000545083 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
CHD4-212ENST00000545083 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
CHD4-212ENST00000545083 EPRSP07814 1512 aaKnown RBP16.72■□□□□ 0.27
CHD4-212ENST00000545083 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
CHD4-212ENST00000545083 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
CHD4-212ENST00000545083 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
CHD4-212ENST00000545083 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
CHD4-212ENST00000545083 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
CHD4-212ENST00000545083 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
CHD4-212ENST00000545083 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
CHD4-212ENST00000545083 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
CHD4-212ENST00000545083 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
CHD4-212ENST00000545083 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
CHD4-212ENST00000545083 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
CHD4-212ENST00000545083 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
CHD4-212ENST00000545083 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
CHD4-212ENST00000545083 FBXO41Q8TF61 875 aa16.49■□□□□ 0.23
CHD4-212ENST00000545083 KIF21BO75037 1637 aa16.48■□□□□ 0.23
CHD4-212ENST00000545083 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
CHD4-212ENST00000545083 ABCA8O94911 1581 aa16.46■□□□□ 0.23
CHD4-212ENST00000545083 ARAP3Q8WWN8 1544 aa16.41■□□□□ 0.22
CHD4-212ENST00000545083 PTPRMP28827 1452 aa16.4■□□□□ 0.22
CHD4-212ENST00000545083 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
CHD4-212ENST00000545083 ADAMTSL3P82987 1691 aa16.37■□□□□ 0.21
CHD4-212ENST00000545083 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
CHD4-212ENST00000545083 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
CHD4-212ENST00000545083 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
CHD4-212ENST00000545083 ATP10BO94823 1461 aa16.34■□□□□ 0.21
CHD4-212ENST00000545083 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
CHD4-212ENST00000545083 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
CHD4-212ENST00000545083 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
CHD4-212ENST00000545083 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
CHD4-212ENST00000545083 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
CHD4-212ENST00000545083 MADDQ8WXG6 1647 aa16.29■□□□□ 0.2
CHD4-212ENST00000545083 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
CHD4-212ENST00000545083 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
CHD4-212ENST00000545083 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
CHD4-212ENST00000545083 ARID4BQ4LE39 1312 aaPredicted RBP16.26■□□□□ 0.19
CHD4-212ENST00000545083 NEO1Q92859 1461 aa16.26■□□□□ 0.19
CHD4-212ENST00000545083 HSPA2P54652 639 aa16.23■□□□□ 0.19
CHD4-212ENST00000545083 RIMS1Q86UR5 1692 aaKnown RBP16.2■□□□□ 0.18
CHD4-212ENST00000545083 ARHGEF40Q8TER5 1519 aa16.19■□□□□ 0.18
CHD4-212ENST00000545083 RAPGEF6Q8TEU7 1601 aa16.17■□□□□ 0.18
CHD4-212ENST00000545083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
CHD4-212ENST00000545083 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
CHD4-212ENST00000545083 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
CHD4-212ENST00000545083 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
CHD4-212ENST00000545083 SAMD9Q5K651 1589 aa16.16■□□□□ 0.18
CHD4-212ENST00000545083 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
CHD4-212ENST00000545083 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
CHD4-212ENST00000545083 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
CHD4-212ENST00000545083 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
CHD4-212ENST00000545083 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
CHD4-212ENST00000545083 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
CHD4-212ENST00000545083 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
CHD4-212ENST00000545083 YEATS2Q9ULM3 1422 aa16.12■□□□□ 0.17
CHD4-212ENST00000545083 FANCAO15360 1455 aa16.1■□□□□ 0.17
CHD4-212ENST00000545083 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
CHD4-212ENST00000545083 MLECQ14165 292 aa16.08■□□□□ 0.16
CHD4-212ENST00000545083 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
CHD4-212ENST00000545083 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
CHD4-212ENST00000545083 ILDR2Q71H61 639 aa16.07■□□□□ 0.16
CHD4-212ENST00000545083 ZFYVE16Q7Z3T8 1539 aa16.07■□□□□ 0.16
CHD4-212ENST00000545083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHD4-212ENST00000545083 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
CHD4-212ENST00000545083 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
CHD4-212ENST00000545083 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
CHD4-212ENST00000545083 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
CHD4-212ENST00000545083 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
CHD4-212ENST00000545083 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
CHD4-212ENST00000545083 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
CHD4-212ENST00000545083 DISP3Q9P2K9 1392 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms