RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.64
CHFR-224ENST00000545046 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
CHFR-224ENST00000545046 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
CHFR-224ENST00000545046 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
CHFR-224ENST00000545046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
CHFR-224ENST00000545046 P3H3Q8IVL6 736 aa25.24■■□□□ 1.63
CHFR-224ENST00000545046 THOC2Q8NI27 1593 aaKnown RBP25.24■■□□□ 1.63
CHFR-224ENST00000545046 CCER1Q8TC90 406 aaPredicted RBP25.23■■□□□ 1.63
CHFR-224ENST00000545046 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
CHFR-224ENST00000545046 ADAMTS12P58397 1594 aa25.21■■□□□ 1.63
CHFR-224ENST00000545046 FHOD3Q2V2M9 1422 aa25.2■■□□□ 1.62
CHFR-224ENST00000545046 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
CHFR-224ENST00000545046 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
CHFR-224ENST00000545046 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
CHFR-224ENST00000545046 HNRNPUL2Q1KMD3 747 aaKnown RBP25.15■■□□□ 1.62
CHFR-224ENST00000545046 SAMD9Q5K651 1589 aa25.15■■□□□ 1.62
CHFR-224ENST00000545046 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
CHFR-224ENST00000545046 EIF4G3O43432 1585 aaKnown RBP25.11■■□□□ 1.61
CHFR-224ENST00000545046 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
CHFR-224ENST00000545046 CFAP43Q8NDM7 1665 aa25.11■■□□□ 1.61
CHFR-224ENST00000545046 CASKIN1Q8WXD9 1431 aa25.1■■□□□ 1.61
CHFR-224ENST00000545046 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
CHFR-224ENST00000545046 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
CHFR-224ENST00000545046 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
CHFR-224ENST00000545046 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
CHFR-224ENST00000545046 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
CHFR-224ENST00000545046 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
CHFR-224ENST00000545046 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
CHFR-224ENST00000545046 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
CHFR-224ENST00000545046 KIAA0586Q9BVV6 1533 aa24.92■■□□□ 1.58
CHFR-224ENST00000545046 UGGT2Q9NYU1 1516 aa24.91■■□□□ 1.58
CHFR-224ENST00000545046 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
CHFR-224ENST00000545046 LRRIQ1Q96JM4 1722 aa24.88■■□□□ 1.57
CHFR-224ENST00000545046 CHMP7Q8WUX9 453 aaPredicted RBP24.88■■□□□ 1.57
CHFR-224ENST00000545046 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
CHFR-224ENST00000545046 MTUS2Q5JR59 1369 aa24.81■■□□□ 1.56
CHFR-224ENST00000545046 HECW1Q76N89 1606 aa24.81■■□□□ 1.56
CHFR-224ENST00000545046 CCDC18Q5T9S5 1454 aa24.8■■□□□ 1.56
CHFR-224ENST00000545046 FBLN2P98095 1184 aa24.79■■□□□ 1.56
CHFR-224ENST00000545046 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
CHFR-224ENST00000545046 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
CHFR-224ENST00000545046 ITGAEP38570 1179 aa24.77■■□□□ 1.56
CHFR-224ENST00000545046 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
CHFR-224ENST00000545046 EHBP1L1Q8N3D4 1523 aa24.74■■□□□ 1.55
CHFR-224ENST00000545046 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
CHFR-224ENST00000545046 SUPT6HQ7KZ85 1726 aaKnown RBP24.73■■□□□ 1.55
CHFR-224ENST00000545046 NUP160Q12769 1436 aa24.71■■□□□ 1.55
CHFR-224ENST00000545046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.69■■□□□ 1.54
CHFR-224ENST00000545046 EPRSP07814 1512 aaKnown RBP24.69■■□□□ 1.54
CHFR-224ENST00000545046 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
CHFR-224ENST00000545046 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
CHFR-224ENST00000545046 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
CHFR-224ENST00000545046 DHX57Q6P158 1386 aaKnown RBP24.65■■□□□ 1.54
CHFR-224ENST00000545046 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
CHFR-224ENST00000545046 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
CHFR-224ENST00000545046 CARMIL2Q6F5E8 1435 aa24.63■■□□□ 1.53
CHFR-224ENST00000545046 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
CHFR-224ENST00000545046 CDK13Q14004 1512 aaKnown RBP24.61■■□□□ 1.53
CHFR-224ENST00000545046 MYOM3Q5VTT5 1437 aa24.61■■□□□ 1.53
CHFR-224ENST00000545046 SETD5Q9C0A6 1442 aa24.6■■□□□ 1.53
CHFR-224ENST00000545046 ARHGEF11O15085 1522 aa24.58■■□□□ 1.53
CHFR-224ENST00000545046 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
CHFR-224ENST00000545046 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
CHFR-224ENST00000545046 ARID3CA6NKF2 412 aa24.53■■□□□ 1.52
CHFR-224ENST00000545046 CHD1O14646 1710 aa24.53■■□□□ 1.52
CHFR-224ENST00000545046 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
CHFR-224ENST00000545046 CDK11AQ9UQ88 783 aaPredicted RBP24.5■■□□□ 1.51
CHFR-224ENST00000545046 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.51
CHFR-224ENST00000545046 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
CHFR-224ENST00000545046 MIA2Q96PC5 1412 aa24.43■■□□□ 1.5
CHFR-224ENST00000545046 PRG4Q92954 1404 aaPredicted RBP24.4■■□□□ 1.5
CHFR-224ENST00000545046 PTPRKQ15262 1439 aa24.38■■□□□ 1.49
CHFR-224ENST00000545046 ABCA8O94911 1581 aa24.38■■□□□ 1.49
CHFR-224ENST00000545046 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
CHFR-224ENST00000545046 HFM1A2PYH4 1435 aa24.36■■□□□ 1.49
CHFR-224ENST00000545046 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
CHFR-224ENST00000545046 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
CHFR-224ENST00000545046 SHROOM2Q13796 1616 aa24.33■■□□□ 1.48
CHFR-224ENST00000545046 PTPRGP23470 1445 aa24.32■■□□□ 1.48
CHFR-224ENST00000545046 ADCY10Q96PN6 1610 aa24.31■■□□□ 1.48
CHFR-224ENST00000545046 NAIPQ13075 1403 aa24.28■■□□□ 1.48
CHFR-224ENST00000545046 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CHFR-224ENST00000545046 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
CHFR-224ENST00000545046 PLEKHD1A6NEE1 506 aa24.26■■□□□ 1.47
CHFR-224ENST00000545046 ATP10BO94823 1461 aa24.26■■□□□ 1.47
CHFR-224ENST00000545046 GCC2Q8IWJ2 1684 aa24.24■■□□□ 1.47
CHFR-224ENST00000545046 KIF14Q15058 1648 aa24.23■■□□□ 1.47
CHFR-224ENST00000545046 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
CHFR-224ENST00000545046 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
CHFR-224ENST00000545046 UACAQ9BZF9 1416 aa24.22■■□□□ 1.47
CHFR-224ENST00000545046 DNMT1P26358 1616 aaKnown RBP24.2■■□□□ 1.46
CHFR-224ENST00000545046 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
CHFR-224ENST00000545046 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
CHFR-224ENST00000545046 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
CHFR-224ENST00000545046 DAPK1P53355 1430 aa24.18■■□□□ 1.46
CHFR-224ENST00000545046 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
CHFR-224ENST00000545046 ZNF644Q9H582 1327 aaPredicted RBP24.15■■□□□ 1.46
CHFR-224ENST00000545046 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.45
CHFR-224ENST00000545046 ABCC5O15440 1437 aa24.14■■□□□ 1.45
CHFR-224ENST00000545046 ERCC6L2Q5T890 1561 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms