RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ABCC10Q5T3U5 1492 aa28.73■■■□□ 2.19
DDX55-212ENST00000544738 ILDR1Q86SU0 546 aaPredicted RBP28.72■■■□□ 2.19
DDX55-212ENST00000544738 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.18
DDX55-212ENST00000544738 MAPKBP1O60336 1514 aa28.57■■■□□ 2.16
DDX55-212ENST00000544738 TOP2BQ02880 1626 aa28.57■■■□□ 2.16
DDX55-212ENST00000544738 DIP2BQ9P265 1576 aa28.56■■■□□ 2.16
DDX55-212ENST00000544738 KDM6BO15054 1643 aa28.55■■■□□ 2.16
DDX55-212ENST00000544738 BIVM-ERCC5R4GMW8 1640 aa28.53■■■□□ 2.16
DDX55-212ENST00000544738 ADCY10Q96PN6 1610 aa28.49■■■□□ 2.15
DDX55-212ENST00000544738 TSPOAP1O95153 1857 aa28.47■■■□□ 2.15
DDX55-212ENST00000544738 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
DDX55-212ENST00000544738 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
DDX55-212ENST00000544738 KIAA0586Q9BVV6 1533 aa28.33■■■□□ 2.13
DDX55-212ENST00000544738 PTPRGP23470 1445 aa28.32■■■□□ 2.12
DDX55-212ENST00000544738 ADGRL1O94910 1474 aa28.25■■■□□ 2.11
DDX55-212ENST00000544738 IGF1RP08069 1367 aa28.24■■■□□ 2.11
DDX55-212ENST00000544738 ASXL2Q76L83 1435 aa28.2■■■□□ 2.11
DDX55-212ENST00000544738 PLB1Q6P1J6 1458 aa28.16■■■□□ 2.1
DDX55-212ENST00000544738 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
DDX55-212ENST00000544738 ABCC2Q92887 1545 aa28.16■■■□□ 2.1
DDX55-212ENST00000544738 CARMIL2Q6F5E8 1435 aa28.13■■■□□ 2.09
DDX55-212ENST00000544738 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
DDX55-212ENST00000544738 COL17A1Q9UMD9 1497 aaPredicted RBP28.11■■■□□ 2.09
DDX55-212ENST00000544738 GLI2P10070 1586 aa28.09■■■□□ 2.09
DDX55-212ENST00000544738 PPRC1Q5VV67 1664 aaKnown RBP28.08■■■□□ 2.09
DDX55-212ENST00000544738 HECW2Q9P2P5 1572 aa28.07■■■□□ 2.08
DDX55-212ENST00000544738 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
DDX55-212ENST00000544738 CUL7Q14999 1698 aa28.03■■■□□ 2.08
DDX55-212ENST00000544738 UACAQ9BZF9 1416 aa28.02■■■□□ 2.08
DDX55-212ENST00000544738 UHRF1BP1LA0JNW5 1464 aa28■■■□□ 2.07
DDX55-212ENST00000544738 EPRSP07814 1512 aaKnown RBP27.98■■■□□ 2.07
DDX55-212ENST00000544738 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.07
DDX55-212ENST00000544738 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
DDX55-212ENST00000544738 MAP3K4Q9Y6R4 1608 aa27.89■■■□□ 2.05
DDX55-212ENST00000544738 KDM5BQ9UGL1 1544 aa27.88■■■□□ 2.05
DDX55-212ENST00000544738 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
DDX55-212ENST00000544738 FBXO41Q8TF61 875 aa27.85■■■□□ 2.05
DDX55-212ENST00000544738 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
DDX55-212ENST00000544738 ZCCHC11Q5TAX3 1644 aaKnown RBP27.79■■■□□ 2.04
DDX55-212ENST00000544738 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
DDX55-212ENST00000544738 CD109Q6YHK3 1445 aa27.75■■■□□ 2.03
DDX55-212ENST00000544738 UGGT2Q9NYU1 1516 aa27.69■■■□□ 2.02
DDX55-212ENST00000544738 MAGI3Q5TCQ9 1506 aa27.66■■■□□ 2.02
DDX55-212ENST00000544738 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.02
DDX55-212ENST00000544738 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
DDX55-212ENST00000544738 KIF21BO75037 1637 aa27.57■■■□□ 2
DDX55-212ENST00000544738 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
DDX55-212ENST00000544738 ARID3CA6NKF2 412 aa27.54■■■□□ 2
DDX55-212ENST00000544738 PTPRMP28827 1452 aa27.51■■□□□ 1.99
DDX55-212ENST00000544738 ARID4BQ4LE39 1312 aaPredicted RBP27.47■■□□□ 1.99
DDX55-212ENST00000544738 RAPGEF3O95398 923 aa27.47■■□□□ 1.99
DDX55-212ENST00000544738 ARAP3Q8WWN8 1544 aa27.46■■□□□ 1.99
DDX55-212ENST00000544738 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
DDX55-212ENST00000544738 ABCA8O94911 1581 aa27.44■■□□□ 1.98
DDX55-212ENST00000544738 FAM9AQ8IZU1 332 aaPredicted RBP27.43■■□□□ 1.98
DDX55-212ENST00000544738 ADAMTSL3P82987 1691 aa27.38■■□□□ 1.97
DDX55-212ENST00000544738 P3H3Q8IVL6 736 aa27.38■■□□□ 1.97
DDX55-212ENST00000544738 PHLDB1Q86UU1 1377 aa27.36■■□□□ 1.97
DDX55-212ENST00000544738 PLPPR3Q6T4P5 718 aa27.34■■□□□ 1.97
DDX55-212ENST00000544738 ATP10BO94823 1461 aa27.32■■□□□ 1.96
DDX55-212ENST00000544738 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
DDX55-212ENST00000544738 HSPA2P54652 639 aa27.32■■□□□ 1.96
DDX55-212ENST00000544738 PCF11O94913 1555 aaKnown RBP27.31■■□□□ 1.96
DDX55-212ENST00000544738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
DDX55-212ENST00000544738 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
DDX55-212ENST00000544738 LMTK3Q96Q04 1460 aa27.3■■□□□ 1.96
DDX55-212ENST00000544738 CTTNBP2Q8WZ74 1663 aa27.29■■□□□ 1.96
DDX55-212ENST00000544738 MADDQ8WXG6 1647 aa27.25■■□□□ 1.95
DDX55-212ENST00000544738 CERKQ8TCT0 537 aa27.24■■□□□ 1.95
DDX55-212ENST00000544738 BCORL1Q5H9F3 1711 aa27.24■■□□□ 1.95
DDX55-212ENST00000544738 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
DDX55-212ENST00000544738 NEO1Q92859 1461 aa27.22■■□□□ 1.95
DDX55-212ENST00000544738 ABCA9Q8IUA7 1624 aa27.21■■□□□ 1.95
DDX55-212ENST00000544738 EEA1Q15075 1411 aa27.17■■□□□ 1.94
DDX55-212ENST00000544738 RIMS1Q86UR5 1692 aaKnown RBP27.13■■□□□ 1.93
DDX55-212ENST00000544738 FRMPD1Q5SYB0 1578 aa27.12■■□□□ 1.93
DDX55-212ENST00000544738 MLECQ14165 292 aa27.11■■□□□ 1.93
DDX55-212ENST00000544738 ILDR2Q71H61 639 aa27.1■■□□□ 1.93
DDX55-212ENST00000544738 DENND4BO75064 1496 aaPredicted RBP27.09■■□□□ 1.93
DDX55-212ENST00000544738 DISP3Q9P2K9 1392 aa27.09■■□□□ 1.93
DDX55-212ENST00000544738 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
DDX55-212ENST00000544738 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
DDX55-212ENST00000544738 RANGAP1P46060 587 aaPredicted RBP27.05■■□□□ 1.92
DDX55-212ENST00000544738 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
DDX55-212ENST00000544738 SOCS7O14512 581 aa27.03■■□□□ 1.92
DDX55-212ENST00000544738 ARHGEF40Q8TER5 1519 aa27.03■■□□□ 1.92
DDX55-212ENST00000544738 RAPGEF6Q8TEU7 1601 aa27■■□□□ 1.91
DDX55-212ENST00000544738 FANCAO15360 1455 aa27■■□□□ 1.91
DDX55-212ENST00000544738 FHOD3Q2V2M9 1422 aa26.99■■□□□ 1.91
DDX55-212ENST00000544738 YEATS2Q9ULM3 1422 aa26.96■■□□□ 1.91
DDX55-212ENST00000544738 NUP153P49790 1475 aaKnown RBP26.95■■□□□ 1.91
DDX55-212ENST00000544738 RICTORQ6R327 1708 aa26.93■■□□□ 1.9
DDX55-212ENST00000544738 CEBPAP49715 358 aaPredicted RBP26.92■■□□□ 1.9
DDX55-212ENST00000544738 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
DDX55-212ENST00000544738 SAMD9Q5K651 1589 aa26.91■■□□□ 1.9
DDX55-212ENST00000544738 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
DDX55-212ENST00000544738 DMRT2Q9Y5R5 561 aa26.89■■□□□ 1.9
DDX55-212ENST00000544738 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
DDX55-212ENST00000544738 SIGLEC1Q9BZZ2 1709 aa26.86■■□□□ 1.89
DDX55-212ENST00000544738 MAGI2Q86UL8 1455 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms