RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 NPM1P06748 294 aaKnown RBP eCLIP26.21■■□□□ 1.79
COPS7A-220ENST00000544725 FAM69CQ0P6D2 419 aa26.21■■□□□ 1.79
COPS7A-220ENST00000544725 ABCC10Q5T3U5 1492 aa26.18■■□□□ 1.78
COPS7A-220ENST00000544725 MAPKBP1O60336 1514 aa26.14■■□□□ 1.77
COPS7A-220ENST00000544725 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
COPS7A-220ENST00000544725 DIP2BQ9P265 1576 aa26.07■■□□□ 1.76
COPS7A-220ENST00000544725 ADCY10Q96PN6 1610 aa26.04■■□□□ 1.76
COPS7A-220ENST00000544725 KIAA0586Q9BVV6 1533 aa26■■□□□ 1.75
COPS7A-220ENST00000544725 KDM6BO15054 1643 aa25.98■■□□□ 1.75
COPS7A-220ENST00000544725 KDM4FA0A1W2PPD8 638 aa25.95■■□□□ 1.74
COPS7A-220ENST00000544725 IGF1RP08069 1367 aa25.92■■□□□ 1.74
COPS7A-220ENST00000544725 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
COPS7A-220ENST00000544725 PTPRGP23470 1445 aa25.87■■□□□ 1.73
COPS7A-220ENST00000544725 CUL7Q14999 1698 aa25.87■■□□□ 1.73
COPS7A-220ENST00000544725 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
COPS7A-220ENST00000544725 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
COPS7A-220ENST00000544725 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
COPS7A-220ENST00000544725 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
COPS7A-220ENST00000544725 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
COPS7A-220ENST00000544725 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
COPS7A-220ENST00000544725 PLB1Q6P1J6 1458 aa25.74■■□□□ 1.71
COPS7A-220ENST00000544725 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
COPS7A-220ENST00000544725 GLI2P10070 1586 aa25.71■■□□□ 1.71
COPS7A-220ENST00000544725 UHRF1BP1LA0JNW5 1464 aa25.68■■□□□ 1.7
COPS7A-220ENST00000544725 IQGAP2Q13576 1575 aa25.65■■□□□ 1.7
COPS7A-220ENST00000544725 ILDR1Q86SU0 546 aaPredicted RBP25.65■■□□□ 1.7
COPS7A-220ENST00000544725 UACAQ9BZF9 1416 aa25.64■■□□□ 1.7
COPS7A-220ENST00000544725 PPRC1Q5VV67 1664 aaKnown RBP25.64■■□□□ 1.69
COPS7A-220ENST00000544725 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
COPS7A-220ENST00000544725 EPRSP07814 1512 aaKnown RBP25.57■■□□□ 1.68
COPS7A-220ENST00000544725 DISP1Q96F81 1524 aa25.57■■□□□ 1.68
COPS7A-220ENST00000544725 KDM5BQ9UGL1 1544 aa25.56■■□□□ 1.68
COPS7A-220ENST00000544725 TEX14Q8IWB6 1497 aa25.55■■□□□ 1.68
COPS7A-220ENST00000544725 COL17A1Q9UMD9 1497 aaPredicted RBP25.55■■□□□ 1.68
COPS7A-220ENST00000544725 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
COPS7A-220ENST00000544725 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
COPS7A-220ENST00000544725 ZCCHC11Q5TAX3 1644 aaKnown RBP25.46■■□□□ 1.67
COPS7A-220ENST00000544725 RAPGEF2Q9Y4G8 1499 aa25.45■■□□□ 1.66
COPS7A-220ENST00000544725 KIAA0556O60303 1618 aa25.42■■□□□ 1.66
COPS7A-220ENST00000544725 HECW2Q9P2P5 1572 aa25.41■■□□□ 1.66
COPS7A-220ENST00000544725 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
COPS7A-220ENST00000544725 CD109Q6YHK3 1445 aa25.32■■□□□ 1.64
COPS7A-220ENST00000544725 MAGI3Q5TCQ9 1506 aa25.31■■□□□ 1.64
COPS7A-220ENST00000544725 KCNH8Q96L42 1107 aa25.28■■□□□ 1.64
COPS7A-220ENST00000544725 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
COPS7A-220ENST00000544725 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
COPS7A-220ENST00000544725 ABCA8O94911 1581 aa25.22■■□□□ 1.63
COPS7A-220ENST00000544725 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.62
COPS7A-220ENST00000544725 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
COPS7A-220ENST00000544725 ARAP3Q8WWN8 1544 aa25.12■■□□□ 1.61
COPS7A-220ENST00000544725 KIF21BO75037 1637 aa25.12■■□□□ 1.61
COPS7A-220ENST00000544725 PHLDB1Q86UU1 1377 aa25.07■■□□□ 1.6
COPS7A-220ENST00000544725 FBXO41Q8TF61 875 aa25.06■■□□□ 1.6
COPS7A-220ENST00000544725 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
COPS7A-220ENST00000544725 ARID3CA6NKF2 412 aa25.04■■□□□ 1.6
COPS7A-220ENST00000544725 ATP10BO94823 1461 aa25.02■■□□□ 1.6
COPS7A-220ENST00000544725 PTPRMP28827 1452 aa25■■□□□ 1.59
COPS7A-220ENST00000544725 P3H3Q8IVL6 736 aa24.99■■□□□ 1.59
COPS7A-220ENST00000544725 ABCA9Q8IUA7 1624 aa24.98■■□□□ 1.59
COPS7A-220ENST00000544725 ADAMTSL3P82987 1691 aa24.97■■□□□ 1.59
COPS7A-220ENST00000544725 RAPGEF3O95398 923 aa24.96■■□□□ 1.59
COPS7A-220ENST00000544725 NEO1Q92859 1461 aa24.96■■□□□ 1.59
COPS7A-220ENST00000544725 ARID4BQ4LE39 1312 aaPredicted RBP24.9■■□□□ 1.58
COPS7A-220ENST00000544725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.9■■□□□ 1.58
COPS7A-220ENST00000544725 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
COPS7A-220ENST00000544725 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
COPS7A-220ENST00000544725 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
COPS7A-220ENST00000544725 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
COPS7A-220ENST00000544725 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
COPS7A-220ENST00000544725 FRMPD1Q5SYB0 1578 aa24.83■■□□□ 1.57
COPS7A-220ENST00000544725 MADDQ8WXG6 1647 aa24.83■■□□□ 1.56
COPS7A-220ENST00000544725 LMTK3Q96Q04 1460 aa24.81■■□□□ 1.56
COPS7A-220ENST00000544725 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
COPS7A-220ENST00000544725 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
COPS7A-220ENST00000544725 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
COPS7A-220ENST00000544725 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
COPS7A-220ENST00000544725 PLEKHD1A6NEE1 506 aa24.75■■□□□ 1.55
COPS7A-220ENST00000544725 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
COPS7A-220ENST00000544725 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
COPS7A-220ENST00000544725 POGZQ7Z3K3 1410 aa24.72■■□□□ 1.55
COPS7A-220ENST00000544725 RIMS1Q86UR5 1692 aaKnown RBP24.72■■□□□ 1.55
COPS7A-220ENST00000544725 FANCAO15360 1455 aa24.7■■□□□ 1.54
COPS7A-220ENST00000544725 RICTORQ6R327 1708 aa24.69■■□□□ 1.54
COPS7A-220ENST00000544725 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
COPS7A-220ENST00000544725 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
COPS7A-220ENST00000544725 HSPA2P54652 639 aa24.67■■□□□ 1.54
COPS7A-220ENST00000544725 PLPPR3Q6T4P5 718 aa24.65■■□□□ 1.54
COPS7A-220ENST00000544725 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.53
COPS7A-220ENST00000544725 ZFYVE16Q7Z3T8 1539 aa24.63■■□□□ 1.53
COPS7A-220ENST00000544725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.63■■□□□ 1.53
COPS7A-220ENST00000544725 EFCAB5A4FU69 1503 aa24.62■■□□□ 1.53
COPS7A-220ENST00000544725 MAGI2Q86UL8 1455 aa24.62■■□□□ 1.53
COPS7A-220ENST00000544725 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
COPS7A-220ENST00000544725 EEA1Q15075 1411 aa24.59■■□□□ 1.53
COPS7A-220ENST00000544725 CERKQ8TCT0 537 aa24.58■■□□□ 1.53
COPS7A-220ENST00000544725 TTC37Q6PGP7 1564 aa24.58■■□□□ 1.52
COPS7A-220ENST00000544725 MLECQ14165 292 aa24.57■■□□□ 1.52
COPS7A-220ENST00000544725 HECW1Q76N89 1606 aa24.53■■□□□ 1.52
COPS7A-220ENST00000544725 SCAPERQ9BY12 1400 aa24.53■■□□□ 1.52
COPS7A-220ENST00000544725 SIGLEC1Q9BZZ2 1709 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms