RNA–Protein interactions for RNA: ENST00000544266.1

PACRG-208, Transcript of parkin coregulated, humanhuman

TSL 2

Gene PACRG, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-208ENST00000544266 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
PACRG-208ENST00000544266 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
PACRG-208ENST00000544266 ABCC10Q5T3U5 1492 aa14.87□□□□□ -0.03
PACRG-208ENST00000544266 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
PACRG-208ENST00000544266 FAM69CQ0P6D2 419 aa14.86□□□□□ -0.03
PACRG-208ENST00000544266 MAPKBP1O60336 1514 aa14.84□□□□□ -0.03
PACRG-208ENST00000544266 KIF13AQ9H1H9 1805 aa14.84□□□□□ -0.03
PACRG-208ENST00000544266 KIF27Q86VH2 1401 aa14.83□□□□□ -0.03
PACRG-208ENST00000544266 ADCY10Q96PN6 1610 aa14.8□□□□□ -0.04
PACRG-208ENST00000544266 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
PACRG-208ENST00000544266 DIP2BQ9P265 1576 aa14.77□□□□□ -0.05
PACRG-208ENST00000544266 PTPRGP23470 1445 aa14.76□□□□□ -0.05
PACRG-208ENST00000544266 CUL7Q14999 1698 aa14.76□□□□□ -0.05
PACRG-208ENST00000544266 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
PACRG-208ENST00000544266 CARMIL2Q6F5E8 1435 aa14.7□□□□□ -0.06
PACRG-208ENST00000544266 ABCC2Q92887 1545 aa14.68□□□□□ -0.06
PACRG-208ENST00000544266 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
PACRG-208ENST00000544266 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
PACRG-208ENST00000544266 UHRF1BP1LA0JNW5 1464 aa14.66□□□□□ -0.06
PACRG-208ENST00000544266 KDM6BO15054 1643 aa14.66□□□□□ -0.06
PACRG-208ENST00000544266 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
PACRG-208ENST00000544266 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
PACRG-208ENST00000544266 IQGAP2Q13576 1575 aa14.64□□□□□ -0.07
PACRG-208ENST00000544266 DISP1Q96F81 1524 aa14.63□□□□□ -0.07
PACRG-208ENST00000544266 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
PACRG-208ENST00000544266 GLI2P10070 1586 aa14.61□□□□□ -0.07
PACRG-208ENST00000544266 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
PACRG-208ENST00000544266 UGGT2Q9NYU1 1516 aa14.59□□□□□ -0.07
PACRG-208ENST00000544266 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
PACRG-208ENST00000544266 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
PACRG-208ENST00000544266 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
PACRG-208ENST00000544266 COL17A1Q9UMD9 1497 aaPredicted RBP14.55□□□□□ -0.08
PACRG-208ENST00000544266 PPRC1Q5VV67 1664 aaKnown RBP14.55□□□□□ -0.08
PACRG-208ENST00000544266 KIAA0556O60303 1618 aa14.51□□□□□ -0.09
PACRG-208ENST00000544266 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
PACRG-208ENST00000544266 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
PACRG-208ENST00000544266 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
PACRG-208ENST00000544266 ADGRL1O94910 1474 aa14.47□□□□□ -0.09
PACRG-208ENST00000544266 WDR7Q9Y4E6 1490 aa14.47□□□□□ -0.09
PACRG-208ENST00000544266 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
PACRG-208ENST00000544266 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
PACRG-208ENST00000544266 ABCA8O94911 1581 aa14.42□□□□□ -0.1
PACRG-208ENST00000544266 CD109Q6YHK3 1445 aa14.41□□□□□ -0.1
PACRG-208ENST00000544266 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
PACRG-208ENST00000544266 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
PACRG-208ENST00000544266 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
PACRG-208ENST00000544266 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
PACRG-208ENST00000544266 CFAP43Q8NDM7 1665 aa14.33□□□□□ -0.11
PACRG-208ENST00000544266 ATP10BO94823 1461 aa14.33□□□□□ -0.12
PACRG-208ENST00000544266 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
PACRG-208ENST00000544266 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
PACRG-208ENST00000544266 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
PACRG-208ENST00000544266 ARID3CA6NKF2 412 aa14.3□□□□□ -0.12
PACRG-208ENST00000544266 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
PACRG-208ENST00000544266 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
PACRG-208ENST00000544266 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
PACRG-208ENST00000544266 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
PACRG-208ENST00000544266 SAMD9Q5K651 1589 aa14.23□□□□□ -0.13
PACRG-208ENST00000544266 RAPGEF3O95398 923 aa14.23□□□□□ -0.13
PACRG-208ENST00000544266 NEO1Q92859 1461 aa14.21□□□□□ -0.13
PACRG-208ENST00000544266 KIF21BO75037 1637 aa14.2□□□□□ -0.14
PACRG-208ENST00000544266 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
PACRG-208ENST00000544266 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
PACRG-208ENST00000544266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
PACRG-208ENST00000544266 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
PACRG-208ENST00000544266 EEA1Q15075 1411 aa14.18□□□□□ -0.14
PACRG-208ENST00000544266 PTPRMP28827 1452 aa14.16□□□□□ -0.14
PACRG-208ENST00000544266 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
PACRG-208ENST00000544266 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
PACRG-208ENST00000544266 ADAMTSL3P82987 1691 aa14.14□□□□□ -0.15
PACRG-208ENST00000544266 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
PACRG-208ENST00000544266 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
PACRG-208ENST00000544266 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
PACRG-208ENST00000544266 AKNAQ7Z591 1439 aa14.11□□□□□ -0.15
PACRG-208ENST00000544266 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
PACRG-208ENST00000544266 FANCAO15360 1455 aa14.08□□□□□ -0.16
PACRG-208ENST00000544266 FBXO41Q8TF61 875 aa14.08□□□□□ -0.16
PACRG-208ENST00000544266 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
PACRG-208ENST00000544266 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
PACRG-208ENST00000544266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.07□□□□□ -0.16
PACRG-208ENST00000544266 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
PACRG-208ENST00000544266 LMTK3Q96Q04 1460 aa14.05□□□□□ -0.16
PACRG-208ENST00000544266 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
PACRG-208ENST00000544266 PCF11O94913 1555 aaKnown RBP14.04□□□□□ -0.16
PACRG-208ENST00000544266 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
PACRG-208ENST00000544266 MAGI2Q86UL8 1455 aa14.03□□□□□ -0.16
PACRG-208ENST00000544266 ZMYM4Q5VZL5 1548 aa14.03□□□□□ -0.16
PACRG-208ENST00000544266 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
PACRG-208ENST00000544266 TTC37Q6PGP7 1564 aa14.02□□□□□ -0.16
PACRG-208ENST00000544266 PLCH2O75038 1416 aa14.02□□□□□ -0.16
PACRG-208ENST00000544266 POGZQ7Z3K3 1410 aa14.02□□□□□ -0.16
PACRG-208ENST00000544266 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
PACRG-208ENST00000544266 CDK13Q14004 1512 aaKnown RBP14.01□□□□□ -0.17
PACRG-208ENST00000544266 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
PACRG-208ENST00000544266 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
PACRG-208ENST00000544266 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
PACRG-208ENST00000544266 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
PACRG-208ENST00000544266 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
PACRG-208ENST00000544266 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
PACRG-208ENST00000544266 HSPA2P54652 639 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms