RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
C2CD3-219ENST00000542930 MAPKBP1O60336 1514 aa17.28■□□□□ 0.36
C2CD3-219ENST00000542930 DIP2BQ9P265 1576 aa17.27■□□□□ 0.35
C2CD3-219ENST00000542930 KDM6BO15054 1643 aa17.25■□□□□ 0.35
C2CD3-219ENST00000542930 ERICH3Q5RHP9 1530 aa17.24■□□□□ 0.35
C2CD3-219ENST00000542930 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
C2CD3-219ENST00000542930 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
C2CD3-219ENST00000542930 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
C2CD3-219ENST00000542930 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
C2CD3-219ENST00000542930 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
C2CD3-219ENST00000542930 ADGRL1O94910 1474 aa17.07■□□□□ 0.32
C2CD3-219ENST00000542930 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
C2CD3-219ENST00000542930 HECW2Q9P2P5 1572 aa17■□□□□ 0.31
C2CD3-219ENST00000542930 PTPRGP23470 1445 aa16.99■□□□□ 0.31
C2CD3-219ENST00000542930 GLI2P10070 1586 aa16.98■□□□□ 0.31
C2CD3-219ENST00000542930 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
C2CD3-219ENST00000542930 PPRC1Q5VV67 1664 aaKnown RBP16.97■□□□□ 0.31
C2CD3-219ENST00000542930 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
C2CD3-219ENST00000542930 ABCC2Q92887 1545 aa16.96■□□□□ 0.31
C2CD3-219ENST00000542930 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
C2CD3-219ENST00000542930 IGF1RP08069 1367 aa16.91■□□□□ 0.3
C2CD3-219ENST00000542930 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
C2CD3-219ENST00000542930 TTBK1Q5TCY1 1321 aaPredicted RBP16.91■□□□□ 0.3
C2CD3-219ENST00000542930 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
C2CD3-219ENST00000542930 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
C2CD3-219ENST00000542930 UHRF1BP1LA0JNW5 1464 aa16.88■□□□□ 0.29
C2CD3-219ENST00000542930 FBXO41Q8TF61 875 aa16.88■□□□□ 0.29
C2CD3-219ENST00000542930 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
C2CD3-219ENST00000542930 CUL7Q14999 1698 aa16.86■□□□□ 0.29
C2CD3-219ENST00000542930 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
C2CD3-219ENST00000542930 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
C2CD3-219ENST00000542930 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
C2CD3-219ENST00000542930 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
C2CD3-219ENST00000542930 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
C2CD3-219ENST00000542930 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
C2CD3-219ENST00000542930 IQGAP2Q13576 1575 aa16.77■□□□□ 0.27
C2CD3-219ENST00000542930 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
C2CD3-219ENST00000542930 ZCCHC11Q5TAX3 1644 aaKnown RBP16.73■□□□□ 0.27
C2CD3-219ENST00000542930 WDR7Q9Y4E6 1490 aa16.71■□□□□ 0.27
C2CD3-219ENST00000542930 MAGI3Q5TCQ9 1506 aa16.69■□□□□ 0.26
C2CD3-219ENST00000542930 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
C2CD3-219ENST00000542930 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
C2CD3-219ENST00000542930 KIF21BO75037 1637 aa16.63■□□□□ 0.25
C2CD3-219ENST00000542930 CFAP43Q8NDM7 1665 aa16.63■□□□□ 0.25
C2CD3-219ENST00000542930 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
C2CD3-219ENST00000542930 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
C2CD3-219ENST00000542930 PTPRMP28827 1452 aa16.61■□□□□ 0.25
C2CD3-219ENST00000542930 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
C2CD3-219ENST00000542930 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
C2CD3-219ENST00000542930 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
C2CD3-219ENST00000542930 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
C2CD3-219ENST00000542930 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
C2CD3-219ENST00000542930 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
C2CD3-219ENST00000542930 ABCA8O94911 1581 aa16.51■□□□□ 0.23
C2CD3-219ENST00000542930 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
C2CD3-219ENST00000542930 BCORL1Q5H9F3 1711 aa16.46■□□□□ 0.23
C2CD3-219ENST00000542930 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
C2CD3-219ENST00000542930 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
C2CD3-219ENST00000542930 MADDQ8WXG6 1647 aa16.44■□□□□ 0.22
C2CD3-219ENST00000542930 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
C2CD3-219ENST00000542930 SOCS7O14512 581 aa16.42■□□□□ 0.22
C2CD3-219ENST00000542930 NEO1Q92859 1461 aa16.41■□□□□ 0.22
C2CD3-219ENST00000542930 HSPA2P54652 639 aa16.4■□□□□ 0.22
C2CD3-219ENST00000542930 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
C2CD3-219ENST00000542930 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
C2CD3-219ENST00000542930 ATP10BO94823 1461 aa16.39■□□□□ 0.21
C2CD3-219ENST00000542930 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
C2CD3-219ENST00000542930 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
C2CD3-219ENST00000542930 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
C2CD3-219ENST00000542930 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
C2CD3-219ENST00000542930 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
C2CD3-219ENST00000542930 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
C2CD3-219ENST00000542930 ARHGEF40Q8TER5 1519 aa16.31■□□□□ 0.2
C2CD3-219ENST00000542930 POGZQ7Z3K3 1410 aa16.3■□□□□ 0.2
C2CD3-219ENST00000542930 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
C2CD3-219ENST00000542930 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
C2CD3-219ENST00000542930 P3H3Q8IVL6 736 aa16.27■□□□□ 0.2
C2CD3-219ENST00000542930 FANCAO15360 1455 aa16.27■□□□□ 0.19
C2CD3-219ENST00000542930 FHOD3Q2V2M9 1422 aa16.27■□□□□ 0.19
C2CD3-219ENST00000542930 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
C2CD3-219ENST00000542930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
C2CD3-219ENST00000542930 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
C2CD3-219ENST00000542930 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
C2CD3-219ENST00000542930 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
C2CD3-219ENST00000542930 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
C2CD3-219ENST00000542930 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
C2CD3-219ENST00000542930 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
C2CD3-219ENST00000542930 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
C2CD3-219ENST00000542930 MLECQ14165 292 aa16.2■□□□□ 0.18
C2CD3-219ENST00000542930 MAGI2Q86UL8 1455 aa16.2■□□□□ 0.18
C2CD3-219ENST00000542930 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
C2CD3-219ENST00000542930 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
C2CD3-219ENST00000542930 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
C2CD3-219ENST00000542930 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
C2CD3-219ENST00000542930 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
C2CD3-219ENST00000542930 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
C2CD3-219ENST00000542930 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
C2CD3-219ENST00000542930 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
C2CD3-219ENST00000542930 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
C2CD3-219ENST00000542930 SAMD9Q5K651 1589 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms