RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
PDE3A-202ENST00000542675 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
PDE3A-202ENST00000542675 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
PDE3A-202ENST00000542675 CEP170Q5SW79 1584 aa21.56■■□□□ 1.04
PDE3A-202ENST00000542675 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
PDE3A-202ENST00000542675 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
PDE3A-202ENST00000542675 NUP160Q12769 1436 aa21.48■■□□□ 1.03
PDE3A-202ENST00000542675 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
PDE3A-202ENST00000542675 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.039e-13■■■■■ 37.2
PDE3A-202ENST00000542675 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
PDE3A-202ENST00000542675 KIF13AQ9H1H9 1805 aa21.44■■□□□ 1.02
PDE3A-202ENST00000542675 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
PDE3A-202ENST00000542675 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
PDE3A-202ENST00000542675 HOXD11P31277 338 aaPredicted RBP21.34■■□□□ 1.01
PDE3A-202ENST00000542675 PRG4Q92954 1404 aaPredicted RBP21.32■■□□□ 1
PDE3A-202ENST00000542675 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
PDE3A-202ENST00000542675 RNF216Q9NWF9 866 aaPredicted RBP21.27■■□□□ 1
PDE3A-202ENST00000542675 JPH4Q96JJ6 628 aa21.26■□□□□ 0.99
PDE3A-202ENST00000542675 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
PDE3A-202ENST00000542675 KCNA4P22459 653 aa21.19■□□□□ 0.98
PDE3A-202ENST00000542675 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
PDE3A-202ENST00000542675 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
PDE3A-202ENST00000542675 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
PDE3A-202ENST00000542675 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
PDE3A-202ENST00000542675 ABCC10Q5T3U5 1492 aa21.14■□□□□ 0.98
PDE3A-202ENST00000542675 DIP2BQ9P265 1576 aa21.14■□□□□ 0.97
PDE3A-202ENST00000542675 MAPKBP1O60336 1514 aa21.11■□□□□ 0.97
PDE3A-202ENST00000542675 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.97
PDE3A-202ENST00000542675 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
PDE3A-202ENST00000542675 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
PDE3A-202ENST00000542675 IGF1RP08069 1367 aa21.05■□□□□ 0.96
PDE3A-202ENST00000542675 KDM6BO15054 1643 aa21.03■□□□□ 0.96
PDE3A-202ENST00000542675 CUL7Q14999 1698 aa21.02■□□□□ 0.96
PDE3A-202ENST00000542675 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
PDE3A-202ENST00000542675 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
PDE3A-202ENST00000542675 KDM4FA0A1W2PPD8 638 aa20.96■□□□□ 0.95
PDE3A-202ENST00000542675 PTPRGP23470 1445 aa20.92■□□□□ 0.94
PDE3A-202ENST00000542675 PPRC1Q5VV67 1664 aaKnown RBP20.91■□□□□ 0.94
PDE3A-202ENST00000542675 CARMIL1Q5VZK9 1371 aa20.89■□□□□ 0.93
PDE3A-202ENST00000542675 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
PDE3A-202ENST00000542675 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
PDE3A-202ENST00000542675 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
PDE3A-202ENST00000542675 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
PDE3A-202ENST00000542675 CARMIL2Q6F5E8 1435 aa20.81■□□□□ 0.92
PDE3A-202ENST00000542675 DISP1Q96F81 1524 aa20.79■□□□□ 0.92
PDE3A-202ENST00000542675 GLI2P10070 1586 aa20.79■□□□□ 0.92
PDE3A-202ENST00000542675 PLB1Q6P1J6 1458 aa20.76■□□□□ 0.91
PDE3A-202ENST00000542675 UHRF1BP1LA0JNW5 1464 aa20.75■□□□□ 0.91
PDE3A-202ENST00000542675 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
PDE3A-202ENST00000542675 UACAQ9BZF9 1416 aa20.75■□□□□ 0.91
PDE3A-202ENST00000542675 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
PDE3A-202ENST00000542675 MAP3K4Q9Y6R4 1608 aa20.73■□□□□ 0.91
PDE3A-202ENST00000542675 ADGRL1O94910 1474 aa20.71■□□□□ 0.91
PDE3A-202ENST00000542675 EPRSP07814 1512 aaKnown RBP20.7■□□□□ 0.9
PDE3A-202ENST00000542675 KDM5BQ9UGL1 1544 aa20.69■□□□□ 0.9
PDE3A-202ENST00000542675 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
PDE3A-202ENST00000542675 KIAA0556O60303 1618 aa20.68■□□□□ 0.9
PDE3A-202ENST00000542675 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
PDE3A-202ENST00000542675 ILDR1Q86SU0 546 aaPredicted RBP20.63■□□□□ 0.89
PDE3A-202ENST00000542675 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
PDE3A-202ENST00000542675 TEX14Q8IWB6 1497 aa20.57■□□□□ 0.88
PDE3A-202ENST00000542675 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
PDE3A-202ENST00000542675 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
PDE3A-202ENST00000542675 ABCA8O94911 1581 aa20.51■□□□□ 0.87
PDE3A-202ENST00000542675 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
PDE3A-202ENST00000542675 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
PDE3A-202ENST00000542675 CD109Q6YHK3 1445 aa20.46■□□□□ 0.87
PDE3A-202ENST00000542675 KIF21BO75037 1637 aa20.45■□□□□ 0.87
PDE3A-202ENST00000542675 MAGI3Q5TCQ9 1506 aa20.45■□□□□ 0.86
PDE3A-202ENST00000542675 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
PDE3A-202ENST00000542675 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
PDE3A-202ENST00000542675 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
PDE3A-202ENST00000542675 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
PDE3A-202ENST00000542675 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
PDE3A-202ENST00000542675 ATP10BO94823 1461 aa20.33■□□□□ 0.85
PDE3A-202ENST00000542675 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
PDE3A-202ENST00000542675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDE3A-202ENST00000542675 ABCA9Q8IUA7 1624 aa20.29■□□□□ 0.84
PDE3A-202ENST00000542675 ADAMTSL3P82987 1691 aa20.26■□□□□ 0.83
PDE3A-202ENST00000542675 SAMD9Q5K651 1589 aa20.25■□□□□ 0.83
PDE3A-202ENST00000542675 RAPGEF6Q8TEU7 1601 aa20.24■□□□□ 0.83
PDE3A-202ENST00000542675 RAPGEF3O95398 923 aa20.24■□□□□ 0.83
PDE3A-202ENST00000542675 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
PDE3A-202ENST00000542675 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
PDE3A-202ENST00000542675 PTPRMP28827 1452 aa20.2■□□□□ 0.82
PDE3A-202ENST00000542675 BCORL1Q5H9F3 1711 aa20.19■□□□□ 0.82
PDE3A-202ENST00000542675 MADDQ8WXG6 1647 aa20.17■□□□□ 0.82
PDE3A-202ENST00000542675 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
PDE3A-202ENST00000542675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
PDE3A-202ENST00000542675 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
PDE3A-202ENST00000542675 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
PDE3A-202ENST00000542675 NEO1Q92859 1461 aa20.14■□□□□ 0.81
PDE3A-202ENST00000542675 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
PDE3A-202ENST00000542675 PHLDB1Q86UU1 1377 aa20.13■□□□□ 0.81
PDE3A-202ENST00000542675 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
PDE3A-202ENST00000542675 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
PDE3A-202ENST00000542675 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
PDE3A-202ENST00000542675 RIMS1Q86UR5 1692 aaKnown RBP20.13■□□□□ 0.81
PDE3A-202ENST00000542675 FHOD3Q2V2M9 1422 aa20.12■□□□□ 0.81
PDE3A-202ENST00000542675 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms