RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 GRIN2BQ13224 1484 aa30.87■■■□□ 2.53
OTUB1-210ENST00000541478 AQRO60306 1485 aaKnown RBP eCLIP30.86■■■□□ 2.533e-10■■■■■ 44.3
OTUB1-210ENST00000541478 FHAD1B1AJZ9 1412 aa30.85■■■□□ 2.53
OTUB1-210ENST00000541478 ZEB1P37275 1124 aaPredicted RBP30.82■■■□□ 2.52
OTUB1-210ENST00000541478 ADAMTS12P58397 1594 aa30.82■■■□□ 2.52
OTUB1-210ENST00000541478 ZNF608Q9ULD9 1512 aaPredicted RBP30.76■■■□□ 2.52
OTUB1-210ENST00000541478 MAP3K1Q13233 1512 aa30.75■■■□□ 2.51
OTUB1-210ENST00000541478 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.51
OTUB1-210ENST00000541478 FHOD3Q2V2M9 1422 aa30.69■■■□□ 2.5
OTUB1-210ENST00000541478 SAMD9Q5K651 1589 aa30.67■■■□□ 2.5
OTUB1-210ENST00000541478 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
OTUB1-210ENST00000541478 KANK4Q5T7N3 995 aaPredicted RBP30.65■■■□□ 2.5
OTUB1-210ENST00000541478 FMN1Q68DA7 1419 aa30.65■■■□□ 2.5
OTUB1-210ENST00000541478 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
OTUB1-210ENST00000541478 P3H3Q8IVL6 736 aa30.64■■■□□ 2.5
OTUB1-210ENST00000541478 FYCO1Q9BQS8 1478 aa30.63■■■□□ 2.49
OTUB1-210ENST00000541478 SNAPC4Q5SXM2 1469 aa30.61■■■□□ 2.49
OTUB1-210ENST00000541478 CASKIN1Q8WXD9 1431 aa30.59■■■□□ 2.49
OTUB1-210ENST00000541478 IQGAP2Q13576 1575 aa30.59■■■□□ 2.49
OTUB1-210ENST00000541478 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
OTUB1-210ENST00000541478 CFAP43Q8NDM7 1665 aa30.57■■■□□ 2.48
OTUB1-210ENST00000541478 LRRC9Q6ZRR7 1453 aa30.52■■■□□ 2.48
OTUB1-210ENST00000541478 CCER1Q8TC90 406 aaPredicted RBP30.5■■■□□ 2.47
OTUB1-210ENST00000541478 RRBP1Q9P2E9 1410 aaKnown RBP30.5■■■□□ 2.47
OTUB1-210ENST00000541478 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
OTUB1-210ENST00000541478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.5■■■□□ 2.47
OTUB1-210ENST00000541478 KIAA0586Q9BVV6 1533 aa30.44■■■□□ 2.46
OTUB1-210ENST00000541478 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
OTUB1-210ENST00000541478 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
OTUB1-210ENST00000541478 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
OTUB1-210ENST00000541478 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
OTUB1-210ENST00000541478 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
OTUB1-210ENST00000541478 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
OTUB1-210ENST00000541478 CCDC18Q5T9S5 1454 aa30.27■■■□□ 2.44
OTUB1-210ENST00000541478 KIAA0556O60303 1618 aa30.26■■■□□ 2.43
OTUB1-210ENST00000541478 HECW1Q76N89 1606 aa30.26■■■□□ 2.43
OTUB1-210ENST00000541478 CEP170Q5SW79 1584 aa30.26■■■□□ 2.43
OTUB1-210ENST00000541478 NUP160Q12769 1436 aa30.24■■■□□ 2.43
OTUB1-210ENST00000541478 PHLDB1Q86UU1 1377 aa30.23■■■□□ 2.43
OTUB1-210ENST00000541478 MTUS2Q5JR59 1369 aa30.22■■■□□ 2.43
OTUB1-210ENST00000541478 LRRIQ1Q96JM4 1722 aa30.22■■■□□ 2.43
OTUB1-210ENST00000541478 DISP1Q96F81 1524 aa30.22■■■□□ 2.43
OTUB1-210ENST00000541478 FBLN2P98095 1184 aa30.21■■■□□ 2.43
OTUB1-210ENST00000541478 EHBP1L1Q8N3D4 1523 aa30.17■■■□□ 2.42
OTUB1-210ENST00000541478 EPRSP07814 1512 aaKnown RBP30.1■■■□□ 2.41
OTUB1-210ENST00000541478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.1■■■□□ 2.414e-6■■■■■ 30.2
OTUB1-210ENST00000541478 SUPT6HQ7KZ85 1726 aaKnown RBP30.09■■■□□ 2.41
OTUB1-210ENST00000541478 CARMIL2Q6F5E8 1435 aa30.09■■■□□ 2.41
OTUB1-210ENST00000541478 NCOA2Q15596 1464 aa30.04■■■□□ 2.4
OTUB1-210ENST00000541478 JPH4Q96JJ6 628 aa30.03■■■□□ 2.4
OTUB1-210ENST00000541478 FGD6Q6ZV73 1430 aa30.02■■■□□ 2.4
OTUB1-210ENST00000541478 RAPGEF6Q8TEU7 1601 aa30.02■■■□□ 2.4
OTUB1-210ENST00000541478 FAM50AQ14320 339 aaKnown RBP30.02■■■□□ 2.4
OTUB1-210ENST00000541478 ITGAEP38570 1179 aa30■■■□□ 2.39
OTUB1-210ENST00000541478 MAGI3Q5TCQ9 1506 aa29.98■■■□□ 2.39
OTUB1-210ENST00000541478 MYOM3Q5VTT5 1437 aa29.98■■■□□ 2.39
OTUB1-210ENST00000541478 ARHGEF11O15085 1522 aa29.98■■■□□ 2.39
OTUB1-210ENST00000541478 CDK13Q14004 1512 aaKnown RBP29.98■■■□□ 2.39
OTUB1-210ENST00000541478 CLSPNQ9HAW4 1339 aa29.97■■■□□ 2.39
OTUB1-210ENST00000541478 NUP153P49790 1475 aaKnown RBP29.94■■■□□ 2.38
OTUB1-210ENST00000541478 CHD1O14646 1710 aa29.93■■■□□ 2.38
OTUB1-210ENST00000541478 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
OTUB1-210ENST00000541478 SETD5Q9C0A6 1442 aa29.87■■■□□ 2.37
OTUB1-210ENST00000541478 CDK11AQ9UQ88 783 aaPredicted RBP29.87■■■□□ 2.37
OTUB1-210ENST00000541478 RAB3GAP2Q9H2M9 1393 aa29.85■■■□□ 2.37
OTUB1-210ENST00000541478 PLB1Q6P1J6 1458 aa29.83■■■□□ 2.37
OTUB1-210ENST00000541478 PTPN23Q9H3S7 1636 aa29.82■■■□□ 2.36
OTUB1-210ENST00000541478 ARID3CA6NKF2 412 aa29.8■■■□□ 2.36
OTUB1-210ENST00000541478 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
OTUB1-210ENST00000541478 MIA2Q96PC5 1412 aa29.79■■■□□ 2.36
OTUB1-210ENST00000541478 TCOF1Q13428 1488 aaKnown RBP29.77■■■□□ 2.36
OTUB1-210ENST00000541478 ABCA8O94911 1581 aa29.77■■■□□ 2.36
OTUB1-210ENST00000541478 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
OTUB1-210ENST00000541478 TROQ12816 1431 aaPredicted RBP29.73■■■□□ 2.35
OTUB1-210ENST00000541478 PTPRGP23470 1445 aa29.69■■■□□ 2.34
OTUB1-210ENST00000541478 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
OTUB1-210ENST00000541478 HFM1A2PYH4 1435 aa29.66■■■□□ 2.34
OTUB1-210ENST00000541478 ADCY10Q96PN6 1610 aa29.65■■■□□ 2.34
OTUB1-210ENST00000541478 PTPRKQ15262 1439 aa29.64■■■□□ 2.33
OTUB1-210ENST00000541478 CLASP1Q7Z460 1538 aa29.6■■■□□ 2.33
OTUB1-210ENST00000541478 ATP10BO94823 1461 aa29.59■■■□□ 2.33
OTUB1-210ENST00000541478 ITSN2Q9NZM3 1697 aa29.58■■■□□ 2.33
OTUB1-210ENST00000541478 AKNAQ7Z591 1439 aa29.56■■■□□ 2.32
OTUB1-210ENST00000541478 MAPKBP1O60336 1514 aa29.56■■■□□ 2.32
OTUB1-210ENST00000541478 PLEKHD1A6NEE1 506 aa29.55■■■□□ 2.32
OTUB1-210ENST00000541478 NAIPQ13075 1403 aa29.54■■■□□ 2.32
OTUB1-210ENST00000541478 UACAQ9BZF9 1416 aa29.53■■■□□ 2.32
OTUB1-210ENST00000541478 KIF14Q15058 1648 aa29.53■■■□□ 2.32
OTUB1-210ENST00000541478 GCC2Q8IWJ2 1684 aa29.48■■■□□ 2.31
OTUB1-210ENST00000541478 DNMT1P26358 1616 aaKnown RBP29.47■■■□□ 2.31
OTUB1-210ENST00000541478 GPATCH8Q9UKJ3 1502 aaKnown RBP29.47■■■□□ 2.31
OTUB1-210ENST00000541478 DAPK1P53355 1430 aa29.45■■■□□ 2.31
OTUB1-210ENST00000541478 ERCC6L2Q5T890 1561 aa29.45■■■□□ 2.3
OTUB1-210ENST00000541478 CFDP1Q9UEE9 299 aaPredicted RBP29.45■■■□□ 2.3
OTUB1-210ENST00000541478 ZNF316A6NFI3 1004 aaPredicted RBP29.44■■■□□ 2.3
OTUB1-210ENST00000541478 ABCC2Q92887 1545 aa29.43■■■□□ 2.3
OTUB1-210ENST00000541478 ROCK1Q13464 1354 aa29.42■■■□□ 2.3
OTUB1-210ENST00000541478 CAMSAP2Q08AD1 1489 aa29.42■■■□□ 2.3
OTUB1-210ENST00000541478 ABCC10Q5T3U5 1492 aa29.4■■■□□ 2.3
OTUB1-210ENST00000541478 ABCC5O15440 1437 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms