RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
MDM1-211ENST00000540476 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
MDM1-211ENST00000540476 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
MDM1-211ENST00000540476 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
MDM1-211ENST00000540476 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
MDM1-211ENST00000540476 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
MDM1-211ENST00000540476 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
MDM1-211ENST00000540476 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
MDM1-211ENST00000540476 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
MDM1-211ENST00000540476 FOXD1Q16676 465 aa17.08■□□□□ 0.32
MDM1-211ENST00000540476 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
MDM1-211ENST00000540476 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
MDM1-211ENST00000540476 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
MDM1-211ENST00000540476 IGF1RP08069 1367 aa17.02■□□□□ 0.31
MDM1-211ENST00000540476 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
MDM1-211ENST00000540476 PTPRGP23470 1445 aa17■□□□□ 0.31
MDM1-211ENST00000540476 KDM6BO15054 1643 aa16.99■□□□□ 0.31
MDM1-211ENST00000540476 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
MDM1-211ENST00000540476 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
MDM1-211ENST00000540476 CUL7Q14999 1698 aa16.95■□□□□ 0.3
MDM1-211ENST00000540476 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
MDM1-211ENST00000540476 TNIKQ9UKE5 1360 aa16.94■□□□□ 0.3
MDM1-211ENST00000540476 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
MDM1-211ENST00000540476 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
MDM1-211ENST00000540476 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
MDM1-211ENST00000540476 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
MDM1-211ENST00000540476 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
MDM1-211ENST00000540476 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
MDM1-211ENST00000540476 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
MDM1-211ENST00000540476 GLI2P10070 1586 aa16.83■□□□□ 0.28
MDM1-211ENST00000540476 IQGAP2Q13576 1575 aa16.82■□□□□ 0.28
MDM1-211ENST00000540476 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
MDM1-211ENST00000540476 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
MDM1-211ENST00000540476 ILDR1Q86SU0 546 aaPredicted RBP16.76■□□□□ 0.27
MDM1-211ENST00000540476 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
MDM1-211ENST00000540476 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
MDM1-211ENST00000540476 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
MDM1-211ENST00000540476 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
MDM1-211ENST00000540476 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
MDM1-211ENST00000540476 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
MDM1-211ENST00000540476 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
MDM1-211ENST00000540476 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
MDM1-211ENST00000540476 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
MDM1-211ENST00000540476 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
MDM1-211ENST00000540476 KIAA0556O60303 1618 aa16.65■□□□□ 0.26
MDM1-211ENST00000540476 ZCCHC11Q5TAX3 1644 aaKnown RBP16.64■□□□□ 0.25
MDM1-211ENST00000540476 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
MDM1-211ENST00000540476 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
MDM1-211ENST00000540476 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
MDM1-211ENST00000540476 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
MDM1-211ENST00000540476 HECW2Q9P2P5 1572 aa16.59■□□□□ 0.25
MDM1-211ENST00000540476 CFAP43Q8NDM7 1665 aa16.53■□□□□ 0.24
MDM1-211ENST00000540476 ADRA2BP18089 450 aa16.52■□□□□ 0.24
MDM1-211ENST00000540476 ABCA8O94911 1581 aa16.51■□□□□ 0.23
MDM1-211ENST00000540476 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
MDM1-211ENST00000540476 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
MDM1-211ENST00000540476 ARAP3Q8WWN8 1544 aa16.47■□□□□ 0.23
MDM1-211ENST00000540476 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
MDM1-211ENST00000540476 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
MDM1-211ENST00000540476 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
MDM1-211ENST00000540476 FBXO41Q8TF61 875 aa16.43■□□□□ 0.22
MDM1-211ENST00000540476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
MDM1-211ENST00000540476 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
MDM1-211ENST00000540476 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
MDM1-211ENST00000540476 ATP10BO94823 1461 aa16.41■□□□□ 0.22
MDM1-211ENST00000540476 KIF21BO75037 1637 aa16.39■□□□□ 0.21
MDM1-211ENST00000540476 NEO1Q92859 1461 aa16.39■□□□□ 0.21
MDM1-211ENST00000540476 ARID4BQ4LE39 1312 aaPredicted RBP16.39■□□□□ 0.21
MDM1-211ENST00000540476 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
MDM1-211ENST00000540476 PTPRMP28827 1452 aa16.37■□□□□ 0.21
MDM1-211ENST00000540476 ABCA9Q8IUA7 1624 aa16.35■□□□□ 0.21
MDM1-211ENST00000540476 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
MDM1-211ENST00000540476 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
MDM1-211ENST00000540476 ADAMTSL3P82987 1691 aa16.29■□□□□ 0.2
MDM1-211ENST00000540476 RAPGEF6Q8TEU7 1601 aa16.28■□□□□ 0.2
MDM1-211ENST00000540476 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
MDM1-211ENST00000540476 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
MDM1-211ENST00000540476 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
MDM1-211ENST00000540476 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
MDM1-211ENST00000540476 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
MDM1-211ENST00000540476 BCORL1Q5H9F3 1711 aa16.23■□□□□ 0.19
MDM1-211ENST00000540476 AKNAQ7Z591 1439 aa16.23■□□□□ 0.19
MDM1-211ENST00000540476 RANGAP1P46060 587 aaPredicted RBP16.23■□□□□ 0.19
MDM1-211ENST00000540476 FANCAO15360 1455 aa16.22■□□□□ 0.19
MDM1-211ENST00000540476 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
MDM1-211ENST00000540476 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
MDM1-211ENST00000540476 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
MDM1-211ENST00000540476 EEA1Q15075 1411 aa16.21■□□□□ 0.19
MDM1-211ENST00000540476 ARHGEF40Q8TER5 1519 aa16.21■□□□□ 0.19
MDM1-211ENST00000540476 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.18
MDM1-211ENST00000540476 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
MDM1-211ENST00000540476 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
MDM1-211ENST00000540476 MAGI2Q86UL8 1455 aa16.17■□□□□ 0.18
MDM1-211ENST00000540476 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
MDM1-211ENST00000540476 HSPA2P54652 639 aa16.16■□□□□ 0.18
MDM1-211ENST00000540476 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.18
MDM1-211ENST00000540476 MLECQ14165 292 aa16.14■□□□□ 0.17
MDM1-211ENST00000540476 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
MDM1-211ENST00000540476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.17
MDM1-211ENST00000540476 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms