RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 A0A0G2JS52 829 aa16.88■□□□□ 0.29
CACNB4-210ENST00000539935 MRS2Q9HD23 443 aa16.86■□□□□ 0.29
CACNB4-210ENST00000539935 NAP1L5Q96NT1 182 aaPredicted RBP16.85■□□□□ 0.29
CACNB4-210ENST00000539935 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
CACNB4-210ENST00000539935 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
CACNB4-210ENST00000539935 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
CACNB4-210ENST00000539935 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
CACNB4-210ENST00000539935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.286e-7■■■■■ 26.8
CACNB4-210ENST00000539935 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
CACNB4-210ENST00000539935 GOLGA6L6A8MZA4 724 aa16.76■□□□□ 0.27
CACNB4-210ENST00000539935 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
CACNB4-210ENST00000539935 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
CACNB4-210ENST00000539935 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
CACNB4-210ENST00000539935 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CACNB4-210ENST00000539935 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
CACNB4-210ENST00000539935 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
CACNB4-210ENST00000539935 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
CACNB4-210ENST00000539935 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
CACNB4-210ENST00000539935 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
CACNB4-210ENST00000539935 NRDCO43847 1150 aa16.68■□□□□ 0.26
CACNB4-210ENST00000539935 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
CACNB4-210ENST00000539935 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
CACNB4-210ENST00000539935 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNB4-210ENST00000539935 CHAF1AQ13111 956 aaPredicted RBP16.66■□□□□ 0.26
CACNB4-210ENST00000539935 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
CACNB4-210ENST00000539935 NACADO15069 1562 aa16.66■□□□□ 0.26
CACNB4-210ENST00000539935 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
CACNB4-210ENST00000539935 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
CACNB4-210ENST00000539935 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
CACNB4-210ENST00000539935 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
CACNB4-210ENST00000539935 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
CACNB4-210ENST00000539935 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
CACNB4-210ENST00000539935 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
CACNB4-210ENST00000539935 CALRP27797 417 aaKnown RBP16.61■□□□□ 0.25
CACNB4-210ENST00000539935 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
CACNB4-210ENST00000539935 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
CACNB4-210ENST00000539935 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
CACNB4-210ENST00000539935 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
CACNB4-210ENST00000539935 MIER1Q8N108 512 aa16.58■□□□□ 0.24
CACNB4-210ENST00000539935 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
CACNB4-210ENST00000539935 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
CACNB4-210ENST00000539935 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
CACNB4-210ENST00000539935 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
CACNB4-210ENST00000539935 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
CACNB4-210ENST00000539935 KIAA2012Q0VF49 1180 aa16.52■□□□□ 0.24
CACNB4-210ENST00000539935 FGD1P98174 961 aa16.52■□□□□ 0.24
CACNB4-210ENST00000539935 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
CACNB4-210ENST00000539935 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
CACNB4-210ENST00000539935 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
CACNB4-210ENST00000539935 MSNP26038 577 aaKnown RBP16.48■□□□□ 0.23
CACNB4-210ENST00000539935 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
CACNB4-210ENST00000539935 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
CACNB4-210ENST00000539935 NPHP1O15259 732 aa16.47■□□□□ 0.23
CACNB4-210ENST00000539935 KCNJ4P48050 445 aa16.46■□□□□ 0.23
CACNB4-210ENST00000539935 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
CACNB4-210ENST00000539935 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
CACNB4-210ENST00000539935 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
CACNB4-210ENST00000539935 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
CACNB4-210ENST00000539935 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
CACNB4-210ENST00000539935 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
CACNB4-210ENST00000539935 OS9Q13438 667 aaPredicted RBP16.44■□□□□ 0.22
CACNB4-210ENST00000539935 MS4A1P11836 297 aa16.44■□□□□ 0.22
CACNB4-210ENST00000539935 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
CACNB4-210ENST00000539935 RRP7BPQ9NSQ0 103 aa16.43■□□□□ 0.22
CACNB4-210ENST00000539935 NUDCQ9Y266 331 aa16.43■□□□□ 0.22
CACNB4-210ENST00000539935 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
CACNB4-210ENST00000539935 RGS3P49796 1198 aa16.42■□□□□ 0.22
CACNB4-210ENST00000539935 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
CACNB4-210ENST00000539935 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
CACNB4-210ENST00000539935 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
CACNB4-210ENST00000539935 NEUROD2Q15784 382 aa16.39■□□□□ 0.22
CACNB4-210ENST00000539935 ARID3AQ99856 593 aa16.39■□□□□ 0.21
CACNB4-210ENST00000539935 GOLGA6L1Q8N7Z2 621 aa16.39■□□□□ 0.21
CACNB4-210ENST00000539935 PPP4R2Q9NY27 417 aa16.39■□□□□ 0.21
CACNB4-210ENST00000539935 HSCBQ8IWL3 235 aa16.39■□□□□ 0.21
CACNB4-210ENST00000539935 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
CACNB4-210ENST00000539935 CLIP1P30622 1438 aa16.37■□□□□ 0.21
CACNB4-210ENST00000539935 PDE4CQ08493 712 aa16.37■□□□□ 0.21
CACNB4-210ENST00000539935 MCCP23508 829 aa16.36■□□□□ 0.21
CACNB4-210ENST00000539935 CARD11Q9BXL7 1154 aa16.35■□□□□ 0.21
CACNB4-210ENST00000539935 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
CACNB4-210ENST00000539935 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.21
CACNB4-210ENST00000539935 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
CACNB4-210ENST00000539935 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
CACNB4-210ENST00000539935 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
CACNB4-210ENST00000539935 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
CACNB4-210ENST00000539935 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
CACNB4-210ENST00000539935 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
CACNB4-210ENST00000539935 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
CACNB4-210ENST00000539935 POGKQ9P215 609 aa16.3■□□□□ 0.2
CACNB4-210ENST00000539935 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
CACNB4-210ENST00000539935 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
CACNB4-210ENST00000539935 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
CACNB4-210ENST00000539935 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
CACNB4-210ENST00000539935 PTMSP20962 102 aa16.24■□□□□ 0.19
CACNB4-210ENST00000539935 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
CACNB4-210ENST00000539935 PATL2C9JE40 543 aaKnown RBP16.23■□□□□ 0.19
CACNB4-210ENST00000539935 CFDP1Q9UEE9 299 aaPredicted RBP16.22■□□□□ 0.19
CACNB4-210ENST00000539935 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
CACNB4-210ENST00000539935 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms