RNA–Protein interactions for RNA: ENST00000539007.5

ERC1-209, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 3

Gene ERC1, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-209ENST00000539007 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
ERC1-209ENST00000539007 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
ERC1-209ENST00000539007 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
ERC1-209ENST00000539007 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
ERC1-209ENST00000539007 NUBP1P53384 320 aa13.95□□□□□ -0.18
ERC1-209ENST00000539007 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
ERC1-209ENST00000539007 GABBR2O75899 941 aa13.93□□□□□ -0.18
ERC1-209ENST00000539007 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
ERC1-209ENST00000539007 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
ERC1-209ENST00000539007 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
ERC1-209ENST00000539007 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
ERC1-209ENST00000539007 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
ERC1-209ENST00000539007 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
ERC1-209ENST00000539007 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
ERC1-209ENST00000539007 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
ERC1-209ENST00000539007 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
ERC1-209ENST00000539007 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
ERC1-209ENST00000539007 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
ERC1-209ENST00000539007 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
ERC1-209ENST00000539007 MAP3K13O43283 966 aa13.72□□□□□ -0.21
ERC1-209ENST00000539007 CLCN6P51797 869 aa13.69□□□□□ -0.22
ERC1-209ENST00000539007 POTEIP0CG38 1075 aa13.68□□□□□ -0.22
ERC1-209ENST00000539007 PYGBP11216 843 aa13.68□□□□□ -0.22
ERC1-209ENST00000539007 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
ERC1-209ENST00000539007 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
ERC1-209ENST00000539007 GSE1Q14687 1217 aa13.65□□□□□ -0.22
ERC1-209ENST00000539007 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
ERC1-209ENST00000539007 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
ERC1-209ENST00000539007 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
ERC1-209ENST00000539007 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
ERC1-209ENST00000539007 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
ERC1-209ENST00000539007 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
ERC1-209ENST00000539007 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
ERC1-209ENST00000539007 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
ERC1-209ENST00000539007 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
ERC1-209ENST00000539007 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
ERC1-209ENST00000539007 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
ERC1-209ENST00000539007 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
ERC1-209ENST00000539007 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
ERC1-209ENST00000539007 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
ERC1-209ENST00000539007 ASTLQ6HA08 431 aaPredicted RBP13.47□□□□□ -0.25
ERC1-209ENST00000539007 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
ERC1-209ENST00000539007 TIE1P35590 1138 aa13.44□□□□□ -0.26
ERC1-209ENST00000539007 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
ERC1-209ENST00000539007 TMEM106CQ9BVX2 250 aa13.41□□□□□ -0.26
ERC1-209ENST00000539007 PKD2Q13563 968 aa13.4□□□□□ -0.26
ERC1-209ENST00000539007 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
ERC1-209ENST00000539007 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
ERC1-209ENST00000539007 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
ERC1-209ENST00000539007 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
ERC1-209ENST00000539007 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
ERC1-209ENST00000539007 PSEN1P49768 467 aa13.33□□□□□ -0.28
ERC1-209ENST00000539007 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
ERC1-209ENST00000539007 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
ERC1-209ENST00000539007 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
ERC1-209ENST00000539007 CUX2O14529 1486 aa13.28□□□□□ -0.28
ERC1-209ENST00000539007 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
ERC1-209ENST00000539007 C7P10643 843 aa13.27□□□□□ -0.29
ERC1-209ENST00000539007 LHX8Q68G74 356 aa13.27□□□□□ -0.29
ERC1-209ENST00000539007 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
ERC1-209ENST00000539007 RGL2O15211 777 aa13.26□□□□□ -0.29
ERC1-209ENST00000539007 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
ERC1-209ENST00000539007 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
ERC1-209ENST00000539007 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
ERC1-209ENST00000539007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
ERC1-209ENST00000539007 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
ERC1-209ENST00000539007 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
ERC1-209ENST00000539007 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
ERC1-209ENST00000539007 SEC24BO95487 1268 aa13.17□□□□□ -0.3
ERC1-209ENST00000539007 IER5LQ5T953 404 aa13.17□□□□□ -0.3
ERC1-209ENST00000539007 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
ERC1-209ENST00000539007 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
ERC1-209ENST00000539007 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
ERC1-209ENST00000539007 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
ERC1-209ENST00000539007 PLCG2P16885 1265 aa13.11□□□□□ -0.31
ERC1-209ENST00000539007 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
ERC1-209ENST00000539007 NESP48681 1621 aa13.1□□□□□ -0.31
ERC1-209ENST00000539007 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
ERC1-209ENST00000539007 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
ERC1-209ENST00000539007 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
ERC1-209ENST00000539007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■□□ 19.2
ERC1-209ENST00000539007 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
ERC1-209ENST00000539007 STK25O00506 426 aa13.06□□□□□ -0.32
ERC1-209ENST00000539007 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
ERC1-209ENST00000539007 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
ERC1-209ENST00000539007 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
ERC1-209ENST00000539007 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
ERC1-209ENST00000539007 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
ERC1-209ENST00000539007 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
ERC1-209ENST00000539007 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
ERC1-209ENST00000539007 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
ERC1-209ENST00000539007 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
ERC1-209ENST00000539007 CHGAP10645 457 aaKnown RBP12.95□□□□□ -0.34
ERC1-209ENST00000539007 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
ERC1-209ENST00000539007 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
ERC1-209ENST00000539007 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
ERC1-209ENST00000539007 SOX12O15370 315 aa12.92□□□□□ -0.34
ERC1-209ENST00000539007 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
ERC1-209ENST00000539007 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
ERC1-209ENST00000539007 MS4A4AQ96JQ5 239 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms