RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
ATL3-203ENST00000538786 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
ATL3-203ENST00000538786 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
ATL3-203ENST00000538786 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
ATL3-203ENST00000538786 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
ATL3-203ENST00000538786 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
ATL3-203ENST00000538786 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
ATL3-203ENST00000538786 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
ATL3-203ENST00000538786 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
ATL3-203ENST00000538786 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
ATL3-203ENST00000538786 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
ATL3-203ENST00000538786 TIAM1Q13009 1591 aa22.52■■□□□ 1.2
ATL3-203ENST00000538786 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
ATL3-203ENST00000538786 PCF11O94913 1555 aaKnown RBP22.5■■□□□ 1.19
ATL3-203ENST00000538786 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
ATL3-203ENST00000538786 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
ATL3-203ENST00000538786 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
ATL3-203ENST00000538786 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
ATL3-203ENST00000538786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
ATL3-203ENST00000538786 IQGAP2Q13576 1575 aa22.45■■□□□ 1.18
ATL3-203ENST00000538786 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
ATL3-203ENST00000538786 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
ATL3-203ENST00000538786 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
ATL3-203ENST00000538786 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
ATL3-203ENST00000538786 RRBP1Q9P2E9 1410 aaKnown RBP22.42■■□□□ 1.18
ATL3-203ENST00000538786 HNRNPUL2Q1KMD3 747 aaKnown RBP22.41■■□□□ 1.18
ATL3-203ENST00000538786 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
ATL3-203ENST00000538786 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
ATL3-203ENST00000538786 KIAA0586Q9BVV6 1533 aa22.37■■□□□ 1.17
ATL3-203ENST00000538786 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
ATL3-203ENST00000538786 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
ATL3-203ENST00000538786 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
ATL3-203ENST00000538786 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
ATL3-203ENST00000538786 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
ATL3-203ENST00000538786 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
ATL3-203ENST00000538786 DISP1Q96F81 1524 aa22.22■■□□□ 1.15
ATL3-203ENST00000538786 NUP160Q12769 1436 aa22.22■■□□□ 1.15
ATL3-203ENST00000538786 KIAA0556O60303 1618 aa22.21■■□□□ 1.15
ATL3-203ENST00000538786 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
ATL3-203ENST00000538786 FBLN2P98095 1184 aa22.2■■□□□ 1.14
ATL3-203ENST00000538786 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
ATL3-203ENST00000538786 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
ATL3-203ENST00000538786 MTUS2Q5JR59 1369 aa22.19■■□□□ 1.14
ATL3-203ENST00000538786 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.13
ATL3-203ENST00000538786 EPRSP07814 1512 aaKnown RBP22.13■■□□□ 1.13
ATL3-203ENST00000538786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
ATL3-203ENST00000538786 NCOA2Q15596 1464 aa22.08■■□□□ 1.13
ATL3-203ENST00000538786 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
ATL3-203ENST00000538786 CARMIL2Q6F5E8 1435 aa22.08■■□□□ 1.13
ATL3-203ENST00000538786 ITGAEP38570 1179 aa22.08■■□□□ 1.12
ATL3-203ENST00000538786 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.12
ATL3-203ENST00000538786 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.12
ATL3-203ENST00000538786 SUPT6HQ7KZ85 1726 aaKnown RBP22.07■■□□□ 1.12
ATL3-203ENST00000538786 MAGI3Q5TCQ9 1506 aa22.07■■□□□ 1.12
ATL3-203ENST00000538786 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
ATL3-203ENST00000538786 CDK13Q14004 1512 aaKnown RBP22.04■■□□□ 1.12
ATL3-203ENST00000538786 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
ATL3-203ENST00000538786 RAPGEF6Q8TEU7 1601 aa22.03■■□□□ 1.12
ATL3-203ENST00000538786 NUP153P49790 1475 aaKnown RBP22.03■■□□□ 1.12
ATL3-203ENST00000538786 CLSPNQ9HAW4 1339 aa22.02■■□□□ 1.12
ATL3-203ENST00000538786 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
ATL3-203ENST00000538786 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
ATL3-203ENST00000538786 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
ATL3-203ENST00000538786 CHD1O14646 1710 aa21.95■■□□□ 1.1
ATL3-203ENST00000538786 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
ATL3-203ENST00000538786 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
ATL3-203ENST00000538786 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
ATL3-203ENST00000538786 PRG4Q92954 1404 aaPredicted RBP21.9■■□□□ 1.1
ATL3-203ENST00000538786 PTPN23Q9H3S7 1636 aa21.89■■□□□ 1.1
ATL3-203ENST00000538786 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
ATL3-203ENST00000538786 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
ATL3-203ENST00000538786 ABCA8O94911 1581 aa21.87■■□□□ 1.09
ATL3-203ENST00000538786 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
ATL3-203ENST00000538786 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
ATL3-203ENST00000538786 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
ATL3-203ENST00000538786 PTPRGP23470 1445 aa21.82■■□□□ 1.08
ATL3-203ENST00000538786 HFM1A2PYH4 1435 aa21.81■■□□□ 1.08
ATL3-203ENST00000538786 ATP10BO94823 1461 aa21.76■■□□□ 1.07
ATL3-203ENST00000538786 ADCY10Q96PN6 1610 aa21.75■■□□□ 1.07
ATL3-203ENST00000538786 MAPKBP1O60336 1514 aa21.75■■□□□ 1.07
ATL3-203ENST00000538786 NAIPQ13075 1403 aa21.74■■□□□ 1.07
ATL3-203ENST00000538786 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
ATL3-203ENST00000538786 PLEKHD1A6NEE1 506 aa21.72■■□□□ 1.07
ATL3-203ENST00000538786 AKNAQ7Z591 1439 aa21.71■■□□□ 1.07
ATL3-203ENST00000538786 UACAQ9BZF9 1416 aa21.7■■□□□ 1.06
ATL3-203ENST00000538786 KIF14Q15058 1648 aa21.69■■□□□ 1.06
ATL3-203ENST00000538786 GPATCH8Q9UKJ3 1502 aaKnown RBP21.68■■□□□ 1.06
ATL3-203ENST00000538786 ITSN2Q9NZM3 1697 aa21.67■■□□□ 1.06
ATL3-203ENST00000538786 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
ATL3-203ENST00000538786 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
ATL3-203ENST00000538786 DAPK1P53355 1430 aa21.65■■□□□ 1.06
ATL3-203ENST00000538786 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
ATL3-203ENST00000538786 DNMT1P26358 1616 aaKnown RBP21.64■■□□□ 1.05
ATL3-203ENST00000538786 CHIC2Q9UKJ5 165 aa21.63■■□□□ 1.05
ATL3-203ENST00000538786 ABCC10Q5T3U5 1492 aa21.63■■□□□ 1.05
ATL3-203ENST00000538786 GCC2Q8IWJ2 1684 aa21.63■■□□□ 1.05
ATL3-203ENST00000538786 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
ATL3-203ENST00000538786 ABCC5O15440 1437 aa21.62■■□□□ 1.05
ATL3-203ENST00000538786 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
ATL3-203ENST00000538786 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms