RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	CLIP1	P30622	1438 aa		14.24	□□□□□ -0.13
ARMC8-223	ENST00000538260	MYH16	Q9H6N6	1097 aa		14.23	□□□□□ -0.13
ARMC8-223	ENST00000538260	NPM1	P06748	294 aa	Known RBP eCLIP	14.22	□□□□□ -0.13
ARMC8-223	ENST00000538260	SCRIB	Q14160	1630 aa		14.21	□□□□□ -0.13
ARMC8-223	ENST00000538260	TRIM44	Q96DX7	344 aa	Predicted RBP	14.2	□□□□□ -0.14
ARMC8-223	ENST00000538260	GOLGA6L22	H0YM25	854 aa		14.17	□□□□□ -0.14
ARMC8-223	ENST00000538260	SUPT16H	Q9Y5B9	1047 aa	Known RBP	14.17	□□□□□ -0.14
ARMC8-223	ENST00000538260	PPM1G	O15355	546 aa	Predicted RBP	14.17	□□□□□ -0.14
ARMC8-223	ENST00000538260	RRP7BP	Q9NSQ0	103 aa		14.17	□□□□□ -0.14
ARMC8-223	ENST00000538260	NCL	P19338	710 aa	Known RBP	14.14	□□□□□ -0.15
ARMC8-223	ENST00000538260	EEA1	Q15075	1411 aa		14.13	□□□□□ -0.15
ARMC8-223	ENST00000538260	ERICH6B	Q5W0A0	696 aa		14.13	□□□□□ -0.15
ARMC8-223	ENST00000538260	PPP4R2	Q9NY27	417 aa		14.12	□□□□□ -0.15
ARMC8-223	ENST00000538260	CEP162	Q5TB80	1403 aa		14.1	□□□□□ -0.15
ARMC8-223	ENST00000538260	CDCA8	Q53HL2	280 aa		14.09	□□□□□ -0.15
ARMC8-223	ENST00000538260	RSF1	Q96T23	1441 aa	Predicted RBP	14.09	□□□□□ -0.15
ARMC8-223	ENST00000538260	CFAP53	Q96M91	514 aa		14.08	□□□□□ -0.16
ARMC8-223	ENST00000538260	RGL3	Q3MIN7	710 aa		14.06	□□□□□ -0.16
ARMC8-223	ENST00000538260	KNSTRN	Q9Y448	316 aa		14.06	□□□□□ -0.16
ARMC8-223	ENST00000538260	GOLGA3	Q08378	1498 aa		14.06	□□□□□ -0.16
ARMC8-223	ENST00000538260	PLPPR3	Q6T4P5	718 aa		14.04	□□□□□ -0.16
ARMC8-223	ENST00000538260	CHMP7	Q8WUX9	453 aa	Predicted RBP	14.04	□□□□□ -0.16
ARMC8-223	ENST00000538260	TNNT2	P45379	298 aa	Predicted RBP	14.03	□□□□□ -0.16
ARMC8-223	ENST00000538260	PLEKHD1	A6NEE1	506 aa		14.03	□□□□□ -0.16
ARMC8-223	ENST00000538260	PTMA	P06454	111 aa	Known RBP	14.03	□□□□□ -0.16
ARMC8-223	ENST00000538260	CARD11	Q9BXL7	1154 aa		14.03	□□□□□ -0.16
ARMC8-223	ENST00000538260	SENP3-EIF4A1	A0A087X0R7	540 aa		14.02	□□□□□ -0.16
ARMC8-223	ENST00000538260	CDK11B	P21127	795 aa	Known RBP	14.02	□□□□□ -0.16
ARMC8-223	ENST00000538260	NOP58	Q9Y2X3	529 aa	Known RBP	14.02	□□□□□ -0.16
ARMC8-223	ENST00000538260	FTSJ3	Q8IY81	847 aa	Known RBP	14.01	□□□□□ -0.17
ARMC8-223	ENST00000538260	TNIK	Q9UKE5	1360 aa		14.01	□□□□□ -0.17
ARMC8-223	ENST00000538260	LAS1L	Q9Y4W2	734 aa	Known RBP	13.99	□□□□□ -0.17
ARMC8-223	ENST00000538260	RGS3	P49796	1198 aa		13.99	□□□□□ -0.17
ARMC8-223	ENST00000538260	CASC1	Q6TDU7	716 aa		13.98	□□□□□ -0.17
ARMC8-223	ENST00000538260	SIN3A	Q96ST3	1273 aa		13.98	□□□□□ -0.17
ARMC8-223	ENST00000538260	ZRSR1	Q15695	479 aa	Known RBP	13.98	□□□□□ -0.17
ARMC8-223	ENST00000538260	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.98	□□□□□ -0.17
ARMC8-223	ENST00000538260	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.98	□□□□□ -0.17
ARMC8-223	ENST00000538260	B4GALNT3	Q6L9W6	998 aa		13.96	□□□□□ -0.17
ARMC8-223	ENST00000538260	TIMELESS	Q9UNS1	1208 aa		13.96	□□□□□ -0.17
ARMC8-223	ENST00000538260	NEUROD2	Q15784	382 aa		13.96	□□□□□ -0.18
ARMC8-223	ENST00000538260	PPP1R15A	O75807	674 aa	Predicted RBP	13.95	□□□□□ -0.18
ARMC8-223	ENST00000538260	NUDC	Q9Y266	331 aa		13.95	□□□□□ -0.18
ARMC8-223	ENST00000538260	CHMP4B	Q9H444	224 aa	Known RBP	13.94	□□□□□ -0.18
ARMC8-223	ENST00000538260	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.94	□□□□□ -0.18
ARMC8-223	ENST00000538260	MS4A1	P11836	297 aa		13.93	□□□□□ -0.18
ARMC8-223	ENST00000538260	KCNH8	Q96L42	1107 aa		13.93	□□□□□ -0.18
ARMC8-223	ENST00000538260	MAPK8IP3	Q9UPT6	1336 aa		13.93	□□□□□ -0.18
ARMC8-223	ENST00000538260	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.92	□□□□□ -0.18
ARMC8-223	ENST00000538260	FRAT1	Q92837	279 aa	Predicted RBP	13.92	□□□□□ -0.18
ARMC8-223	ENST00000538260	RTN4	Q9NQC3	1192 aa	Known RBP	13.92	□□□□□ -0.18
ARMC8-223	ENST00000538260	CCER2	I3L3R5	266 aa		13.92	□□□□□ -0.18
ARMC8-223	ENST00000538260	C14orf37	Q86TY3	774 aa		13.91	□□□□□ -0.18
ARMC8-223	ENST00000538260	CEP164	Q9UPV0	1460 aa		13.9	□□□□□ -0.18
ARMC8-223	ENST00000538260	KIF27	Q86VH2	1401 aa		13.89	□□□□□ -0.19
ARMC8-223	ENST00000538260	SENP3	Q9H4L4	574 aa	Predicted RBP	13.88	□□□□□ -0.19
ARMC8-223	ENST00000538260	RBM19	Q9Y4C8	960 aa	Known RBP	13.88	□□□□□ -0.19
ARMC8-223	ENST00000538260	ZBTB7C	A1YPR0	619 aa		13.87	□□□□□ -0.19
ARMC8-223	ENST00000538260	HSP90AB1	P08238	724 aa	Known RBP	13.87	□□□□□ -0.19
ARMC8-223	ENST00000538260		A0A0G2JS52	829 aa		13.87	□□□□□ -0.19
ARMC8-223	ENST00000538260	RB1CC1	Q8TDY2	1594 aa		13.86	□□□□□ -0.19
ARMC8-223	ENST00000538260	CCNB3	Q8WWL7	1395 aa		13.86	□□□□□ -0.19
ARMC8-223	ENST00000538260	PLCB2	Q00722	1185 aa		13.86	□□□□□ -0.19
ARMC8-223	ENST00000538260	DEK	P35659	375 aa	Known RBP	13.84	□□□□□ -0.19
ARMC8-223	ENST00000538260	TPRN	Q4KMQ1	711 aa		13.84	□□□□□ -0.19
ARMC8-223	ENST00000538260	CC2D1B	Q5T0F9	858 aa	Known RBP	13.84	□□□□□ -0.19
ARMC8-223	ENST00000538260	PLEKHG5	O94827	1062 aa		13.83	□□□□□ -0.2
ARMC8-223	ENST00000538260	L1TD1	Q5T7N2	865 aa	Known RBP	13.83	□□□□□ -0.2
ARMC8-223	ENST00000538260	TMF1	P82094	1093 aa		13.82	□□□□□ -0.2
ARMC8-223	ENST00000538260	NRDC	O43847	1150 aa		13.82	□□□□□ -0.2
ARMC8-223	ENST00000538260	HSCB	Q8IWL3	235 aa		13.82	□□□□□ -0.2
ARMC8-223	ENST00000538260	PNN	Q9H307	717 aa	Known RBP	13.82	□□□□□ -0.2
ARMC8-223	ENST00000538260	U2SURP	O15042	1029 aa	Known RBP	13.81	□□□□□ -0.2
ARMC8-223	ENST00000538260	POGK	Q9P215	609 aa		13.81	□□□□□ -0.2
ARMC8-223	ENST00000538260	FGD1	P98174	961 aa		13.79	□□□□□ -0.2
ARMC8-223	ENST00000538260	DCAF11	Q8TEB1	546 aa		13.79	□□□□□ -0.2
ARMC8-223	ENST00000538260	GOLGA6L6	A8MZA4	724 aa		13.78	□□□□□ -0.2
ARMC8-223	ENST00000538260	KCNJ4	P48050	445 aa		13.78	□□□□□ -0.2
ARMC8-223	ENST00000538260	GOLGA6L4	A6NEF3	574 aa		13.77	□□□□□ -0.21
ARMC8-223	ENST00000538260	FHAD1	B1AJZ9	1412 aa		13.77	□□□□□ -0.21
ARMC8-223	ENST00000538260	CFAP44	Q96MT7	982 aa		13.76	□□□□□ -0.21
ARMC8-223	ENST00000538260	MSN	P26038	577 aa	Known RBP	13.75	□□□□□ -0.21
ARMC8-223	ENST00000538260	CHAF1A	Q13111	956 aa	Predicted RBP	13.75	□□□□□ -0.21
ARMC8-223	ENST00000538260	OS9	Q13438	667 aa	Predicted RBP	13.75	□□□□□ -0.21
ARMC8-223	ENST00000538260	HAP1	P54257	671 aa	Predicted RBP	13.75	□□□□□ -0.21
ARMC8-223	ENST00000538260	HSPA5	P11021	654 aa	Known RBP	13.74	□□□□□ -0.21
ARMC8-223	ENST00000538260	TCERG1	O14776	1098 aa	Known RBP	13.73	□□□□□ -0.21
ARMC8-223	ENST00000538260	CECR2	Q9BXF3	1484 aa		13.72	□□□□□ -0.21
ARMC8-223	ENST00000538260	MCC	P23508	829 aa		13.72	□□□□□ -0.21
ARMC8-223	ENST00000538260	SETD5	Q9C0A6	1442 aa		13.71	□□□□□ -0.21
ARMC8-223	ENST00000538260	RCAN3	Q9UKA8	241 aa		13.71	□□□□□ -0.21
ARMC8-223	ENST00000538260	MORC1	Q86VD1	984 aa		13.71	□□□□□ -0.22
ARMC8-223	ENST00000538260	IPO8	O15397	1037 aa	Known RBP	13.69	□□□□□ -0.22
ARMC8-223	ENST00000538260	GBP4	Q96PP9	640 aa		13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	SPRYD3	Q8NCJ5	442 aa		13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	TSHZ2	Q9NRE2	1034 aa		13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	KTN1	Q86UP2	1357 aa	Known RBP	13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.68	□□□□□ -0.22
ARMC8-223	ENST00000538260	LMOD2	Q6P5Q4	547 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms