RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
CIT-208ENST00000537607 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
CIT-208ENST00000537607 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
CIT-208ENST00000537607 NPM2Q86SE8 214 aaKnown RBP16.61■□□□□ 0.25
CIT-208ENST00000537607 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
CIT-208ENST00000537607 ANP32AP39687 249 aaKnown RBP16.59■□□□□ 0.25
CIT-208ENST00000537607 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
CIT-208ENST00000537607 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
CIT-208ENST00000537607 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
CIT-208ENST00000537607 SOGA1O94964 1423 aa16.55■□□□□ 0.24
CIT-208ENST00000537607 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
CIT-208ENST00000537607 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
CIT-208ENST00000537607 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
CIT-208ENST00000537607 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
CIT-208ENST00000537607 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
CIT-208ENST00000537607 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
CIT-208ENST00000537607 CUX2O14529 1486 aa16.47■□□□□ 0.23
CIT-208ENST00000537607 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
CIT-208ENST00000537607 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
CIT-208ENST00000537607 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
CIT-208ENST00000537607 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
CIT-208ENST00000537607 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
CIT-208ENST00000537607 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
CIT-208ENST00000537607 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
CIT-208ENST00000537607 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
CIT-208ENST00000537607 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
CIT-208ENST00000537607 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
CIT-208ENST00000537607 UPF2Q9HAU5 1272 aaKnown RBP16.37■□□□□ 0.21
CIT-208ENST00000537607 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
CIT-208ENST00000537607 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
CIT-208ENST00000537607 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
CIT-208ENST00000537607 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
CIT-208ENST00000537607 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
CIT-208ENST00000537607 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
CIT-208ENST00000537607 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
CIT-208ENST00000537607 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
CIT-208ENST00000537607 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
CIT-208ENST00000537607 CDCA8Q53HL2 280 aa16.27■□□□□ 0.2
CIT-208ENST00000537607 ZBTB7CA1YPR0 619 aa16.26■□□□□ 0.19
CIT-208ENST00000537607 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
CIT-208ENST00000537607 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
CIT-208ENST00000537607 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
CIT-208ENST00000537607 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
CIT-208ENST00000537607 WIZO95785 1651 aa16.22■□□□□ 0.19
CIT-208ENST00000537607 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
CIT-208ENST00000537607 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
CIT-208ENST00000537607 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
CIT-208ENST00000537607 NBR1Q14596 966 aa16.19■□□□□ 0.18
CIT-208ENST00000537607 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
CIT-208ENST00000537607 A0A0G2JS52 829 aa16.18■□□□□ 0.18
CIT-208ENST00000537607 FOXD1Q16676 465 aa16.18■□□□□ 0.18
CIT-208ENST00000537607 POGKQ9P215 609 aa16.17■□□□□ 0.18
CIT-208ENST00000537607 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
CIT-208ENST00000537607 MYH16Q9H6N6 1097 aa16.17■□□□□ 0.18
CIT-208ENST00000537607 ARHGAP35Q9NRY4 1499 aa16.17■□□□□ 0.18
CIT-208ENST00000537607 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
CIT-208ENST00000537607 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
CIT-208ENST00000537607 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
CIT-208ENST00000537607 PKD2Q13563 968 aa16.14■□□□□ 0.17
CIT-208ENST00000537607 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
CIT-208ENST00000537607 ANP32BQ92688 251 aaKnown RBP16.13■□□□□ 0.17
CIT-208ENST00000537607 MLECQ14165 292 aa16.11■□□□□ 0.17
CIT-208ENST00000537607 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
CIT-208ENST00000537607 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
CIT-208ENST00000537607 GGT6Q6P531 493 aa16.1■□□□□ 0.17
CIT-208ENST00000537607 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
CIT-208ENST00000537607 TMF1P82094 1093 aa16.1■□□□□ 0.17
CIT-208ENST00000537607 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
CIT-208ENST00000537607 ARXQ96QS3 562 aa16.09■□□□□ 0.17
CIT-208ENST00000537607 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
CIT-208ENST00000537607 MAPK8IP3Q9UPT6 1336 aa16.08■□□□□ 0.16
CIT-208ENST00000537607 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
CIT-208ENST00000537607 KANK1Q14678 1352 aa16.07■□□□□ 0.16
CIT-208ENST00000537607 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
CIT-208ENST00000537607 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
CIT-208ENST00000537607 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
CIT-208ENST00000537607 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
CIT-208ENST00000537607 LMOD2Q6P5Q4 547 aa16.06■□□□□ 0.16
CIT-208ENST00000537607 SAFB2Q14151 953 aaKnown RBP eCLIP16.05■□□□□ 0.16
CIT-208ENST00000537607 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
CIT-208ENST00000537607 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
CIT-208ENST00000537607 HAP1P54257 671 aaPredicted RBP16.04■□□□□ 0.16
CIT-208ENST00000537607 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
CIT-208ENST00000537607 NUP155O75694 1391 aa16.03■□□□□ 0.16
CIT-208ENST00000537607 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
CIT-208ENST00000537607 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.16
CIT-208ENST00000537607 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CIT-208ENST00000537607 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
CIT-208ENST00000537607 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
CIT-208ENST00000537607 RGS3P49796 1198 aa15.98■□□□□ 0.15
CIT-208ENST00000537607 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
CIT-208ENST00000537607 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.155e-6■■■■□ 21.1
CIT-208ENST00000537607 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
CIT-208ENST00000537607 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
CIT-208ENST00000537607 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
CIT-208ENST00000537607 STK26Q9P289 416 aa15.97■□□□□ 0.15
CIT-208ENST00000537607 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
CIT-208ENST00000537607 SOX12O15370 315 aa15.97■□□□□ 0.15
CIT-208ENST00000537607 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
CIT-208ENST00000537607 BECN1Q14457 450 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms