RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
SNHG1-204ENST00000537068 SLC4A1APQ9BWU0 796 aaKnown RBP9.59□□□□□ -0.87
SNHG1-204ENST00000537068 NPM3O75607 178 aaKnown RBP9.56□□□□□ -0.88
SNHG1-204ENST00000537068 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
SNHG1-204ENST00000537068 TRHP20396 242 aaPredicted RBP9.55□□□□□ -0.88
SNHG1-204ENST00000537068 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
SNHG1-204ENST00000537068 GRIN2AQ12879 1464 aa9.52□□□□□ -0.89
SNHG1-204ENST00000537068 NUP160Q12769 1436 aa9.51□□□□□ -0.89
SNHG1-204ENST00000537068 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
SNHG1-204ENST00000537068 SHROOM2Q13796 1616 aa9.51□□□□□ -0.89
SNHG1-204ENST00000537068 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
SNHG1-204ENST00000537068 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
SNHG1-204ENST00000537068 ERCC6L2Q5T890 1561 aa9.5□□□□□ -0.89
SNHG1-204ENST00000537068 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
SNHG1-204ENST00000537068 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
SNHG1-204ENST00000537068 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
SNHG1-204ENST00000537068 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
SNHG1-204ENST00000537068 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
SNHG1-204ENST00000537068 KIF13AQ9H1H9 1805 aa9.43□□□□□ -0.9
SNHG1-204ENST00000537068 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-204ENST00000537068 JPH4Q96JJ6 628 aa9.39□□□□□ -0.91
SNHG1-204ENST00000537068 RUSC2Q8N2Y8 1516 aa9.38□□□□□ -0.91
SNHG1-204ENST00000537068 PRG4Q92954 1404 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-204ENST00000537068 IGF1RP08069 1367 aa9.34□□□□□ -0.91
SNHG1-204ENST00000537068 CUL7Q14999 1698 aa9.33□□□□□ -0.92
SNHG1-204ENST00000537068 MAPKBP1O60336 1514 aa9.33□□□□□ -0.92
SNHG1-204ENST00000537068 KIAA0586Q9BVV6 1533 aa9.33□□□□□ -0.92
SNHG1-204ENST00000537068 ADCY10Q96PN6 1610 aa9.32□□□□□ -0.92
SNHG1-204ENST00000537068 ABCC10Q5T3U5 1492 aa9.32□□□□□ -0.92
SNHG1-204ENST00000537068 DIP2BQ9P265 1576 aa9.3□□□□□ -0.92
SNHG1-204ENST00000537068 RNF216Q9NWF9 866 aaPredicted RBP9.3□□□□□ -0.92
SNHG1-204ENST00000537068 KIF27Q86VH2 1401 aa9.29□□□□□ -0.92
SNHG1-204ENST00000537068 ZBTB22O15209 634 aa9.26□□□□□ -0.93
SNHG1-204ENST00000537068 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
SNHG1-204ENST00000537068 FAM69CQ0P6D2 419 aa9.26□□□□□ -0.93
SNHG1-204ENST00000537068 CARMIL1Q5VZK9 1371 aa9.24□□□□□ -0.93
SNHG1-204ENST00000537068 TSPOAP1O95153 1857 aa9.23□□□□□ -0.93
SNHG1-204ENST00000537068 IQGAP2Q13576 1575 aa9.22□□□□□ -0.93
SNHG1-204ENST00000537068 PTPRGP23470 1445 aa9.22□□□□□ -0.93
SNHG1-204ENST00000537068 KDM6BO15054 1643 aa9.21□□□□□ -0.93
SNHG1-204ENST00000537068 PPRC1Q5VV67 1664 aaKnown RBP9.21□□□□□ -0.93
SNHG1-204ENST00000537068 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
SNHG1-204ENST00000537068 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
SNHG1-204ENST00000537068 GLI2P10070 1586 aa9.2□□□□□ -0.94
SNHG1-204ENST00000537068 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-204ENST00000537068 TNIKQ9UKE5 1360 aa9.2□□□□□ -0.94
SNHG1-204ENST00000537068 CARMIL2Q6F5E8 1435 aa9.2□□□□□ -0.94
SNHG1-204ENST00000537068 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
SNHG1-204ENST00000537068 DISP1Q96F81 1524 aa9.19□□□□□ -0.94
SNHG1-204ENST00000537068 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
SNHG1-204ENST00000537068 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
SNHG1-204ENST00000537068 KDM5BQ9UGL1 1544 aa9.17□□□□□ -0.94
SNHG1-204ENST00000537068 PLB1Q6P1J6 1458 aa9.17□□□□□ -0.94
SNHG1-204ENST00000537068 RAPGEF2Q9Y4G8 1499 aa9.16□□□□□ -0.94
SNHG1-204ENST00000537068 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
SNHG1-204ENST00000537068 UACAQ9BZF9 1416 aa9.16□□□□□ -0.94
SNHG1-204ENST00000537068 KDM4FA0A1W2PPD8 638 aa9.16□□□□□ -0.94
SNHG1-204ENST00000537068 MAP3K4Q9Y6R4 1608 aa9.16□□□□□ -0.94
SNHG1-204ENST00000537068 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
SNHG1-204ENST00000537068 ZCCHC11Q5TAX3 1644 aaKnown RBP9.14□□□□□ -0.95
SNHG1-204ENST00000537068 CTTNBP2Q8WZ74 1663 aa9.13□□□□□ -0.95
SNHG1-204ENST00000537068 EPRSP07814 1512 aaKnown RBP9.13□□□□□ -0.95
SNHG1-204ENST00000537068 COL17A1Q9UMD9 1497 aaPredicted RBP9.12□□□□□ -0.95
SNHG1-204ENST00000537068 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
SNHG1-204ENST00000537068 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
SNHG1-204ENST00000537068 TEX14Q8IWB6 1497 aa9.08□□□□□ -0.96
SNHG1-204ENST00000537068 ABCA8O94911 1581 aa9.07□□□□□ -0.96
SNHG1-204ENST00000537068 CFAP43Q8NDM7 1665 aa9.07□□□□□ -0.96
SNHG1-204ENST00000537068 C1QBPQ07021 282 aaKnown RBP9.07□□□□□ -0.96
SNHG1-204ENST00000537068 PRXQ9BXM0 1461 aa9.07□□□□□ -0.96
SNHG1-204ENST00000537068 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
SNHG1-204ENST00000537068 WDR7Q9Y4E6 1490 aa9.06□□□□□ -0.96
SNHG1-204ENST00000537068 MAGI3Q5TCQ9 1506 aa9.05□□□□□ -0.96
SNHG1-204ENST00000537068 ADGRL1O94910 1474 aa9.04□□□□□ -0.96
SNHG1-204ENST00000537068 CD109Q6YHK3 1445 aa9.02□□□□□ -0.97
SNHG1-204ENST00000537068 ARAP3Q8WWN8 1544 aa9□□□□□ -0.97
SNHG1-204ENST00000537068 SAMD9Q5K651 1589 aa8.99□□□□□ -0.97
SNHG1-204ENST00000537068 ATP10BO94823 1461 aa8.99□□□□□ -0.97
SNHG1-204ENST00000537068 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
SNHG1-204ENST00000537068 KCNH8Q96L42 1107 aa8.97□□□□□ -0.97
SNHG1-204ENST00000537068 HECW2Q9P2P5 1572 aa8.96□□□□□ -0.97
SNHG1-204ENST00000537068 SLC4A2P04920 1241 aa8.96□□□□□ -0.98
SNHG1-204ENST00000537068 PHLDB1Q86UU1 1377 aa8.96□□□□□ -0.98
SNHG1-204ENST00000537068 RAPGEF6Q8TEU7 1601 aa8.95□□□□□ -0.98
SNHG1-204ENST00000537068 KIF21BO75037 1637 aa8.94□□□□□ -0.98
SNHG1-204ENST00000537068 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-204ENST00000537068 ADAMTSL3P82987 1691 aa8.93□□□□□ -0.98
SNHG1-204ENST00000537068 NEO1Q92859 1461 aa8.92□□□□□ -0.98
SNHG1-204ENST00000537068 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
SNHG1-204ENST00000537068 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-204ENST00000537068 NUP153P49790 1475 aaKnown RBP8.91□□□□□ -0.98
SNHG1-204ENST00000537068 EEA1Q15075 1411 aa8.9□□□□□ -0.98
SNHG1-204ENST00000537068 FRMPD1Q5SYB0 1578 aa8.9□□□□□ -0.99
SNHG1-204ENST00000537068 BCORL1Q5H9F3 1711 aa8.89□□□□□ -0.99
SNHG1-204ENST00000537068 RICTORQ6R327 1708 aa8.88□□□□□ -0.99
SNHG1-204ENST00000537068 RAPGEF3O95398 923 aa8.87□□□□□ -0.99
SNHG1-204ENST00000537068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNHG1-204ENST00000537068 PTPRMP28827 1452 aa8.86□□□□□ -0.99
SNHG1-204ENST00000537068 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
SNHG1-204ENST00000537068 EFCAB5A4FU69 1503 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms