RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 ERICH3Q5RHP9 1530 aa34.03■■■■□ 3.04
USP30-209ENST00000536723 MAPKBP1O60336 1514 aa33.95■■■■□ 3.03
USP30-209ENST00000536723 TOP2BQ02880 1626 aa33.95■■■■□ 3.03
USP30-209ENST00000536723 ILDR1Q86SU0 546 aaPredicted RBP33.95■■■■□ 3.03
USP30-209ENST00000536723 DIP2BQ9P265 1576 aa33.93■■■■□ 3.02
USP30-209ENST00000536723 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
USP30-209ENST00000536723 KDM6BO15054 1643 aa33.86■■■■□ 3.01
USP30-209ENST00000536723 ADCY10Q96PN6 1610 aa33.83■■■■□ 3.01
USP30-209ENST00000536723 RUSC2Q8N2Y8 1516 aa33.83■■■■□ 3.01
USP30-209ENST00000536723 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
USP30-209ENST00000536723 TSPOAP1O95153 1857 aa33.69■■■□□ 2.98
USP30-209ENST00000536723 KIAA0586Q9BVV6 1533 aa33.63■■■□□ 2.97
USP30-209ENST00000536723 PTPRGP23470 1445 aa33.53■■■□□ 2.96
USP30-209ENST00000536723 TTBK1Q5TCY1 1321 aaPredicted RBP33.51■■■□□ 2.95
USP30-209ENST00000536723 IGF1RP08069 1367 aa33.5■■■□□ 2.95
USP30-209ENST00000536723 ADGRL1O94910 1474 aa33.5■■■□□ 2.95
USP30-209ENST00000536723 ASXL2Q76L83 1435 aa33.43■■■□□ 2.94
USP30-209ENST00000536723 ABCC2Q92887 1545 aa33.43■■■□□ 2.94
USP30-209ENST00000536723 PLB1Q6P1J6 1458 aa33.39■■■□□ 2.94
USP30-209ENST00000536723 PPRC1Q5VV67 1664 aaKnown RBP33.39■■■□□ 2.94
USP30-209ENST00000536723 GLI2P10070 1586 aa33.38■■■□□ 2.93
USP30-209ENST00000536723 TNIKQ9UKE5 1360 aa33.37■■■□□ 2.93
USP30-209ENST00000536723 COL17A1Q9UMD9 1497 aaPredicted RBP33.37■■■□□ 2.93
USP30-209ENST00000536723 KIF27Q86VH2 1401 aa33.33■■■□□ 2.93
USP30-209ENST00000536723 CARMIL2Q6F5E8 1435 aa33.32■■■□□ 2.92
USP30-209ENST00000536723 CUL7Q14999 1698 aa33.31■■■□□ 2.92
USP30-209ENST00000536723 HECW2Q9P2P5 1572 aa33.3■■■□□ 2.92
USP30-209ENST00000536723 UHRF1BP1LA0JNW5 1464 aa33.25■■■□□ 2.91
USP30-209ENST00000536723 CARMIL1Q5VZK9 1371 aa33.22■■■□□ 2.91
USP30-209ENST00000536723 UACAQ9BZF9 1416 aa33.22■■■□□ 2.91
USP30-209ENST00000536723 EPRSP07814 1512 aaKnown RBP33.21■■■□□ 2.91
USP30-209ENST00000536723 MAP3K4Q9Y6R4 1608 aa33.14■■■□□ 2.9
USP30-209ENST00000536723 TEX14Q8IWB6 1497 aa33.14■■■□□ 2.9
USP30-209ENST00000536723 IQGAP2Q13576 1575 aa33.12■■■□□ 2.89
USP30-209ENST00000536723 KDM5BQ9UGL1 1544 aa33.12■■■□□ 2.89
USP30-209ENST00000536723 DISP1Q96F81 1524 aa33.1■■■□□ 2.89
USP30-209ENST00000536723 ZCCHC11Q5TAX3 1644 aaKnown RBP32.99■■■□□ 2.87
USP30-209ENST00000536723 FBXO41Q8TF61 875 aa32.93■■■□□ 2.86
USP30-209ENST00000536723 WDR7Q9Y4E6 1490 aa32.93■■■□□ 2.86
USP30-209ENST00000536723 UGGT2Q9NYU1 1516 aa32.91■■■□□ 2.86
USP30-209ENST00000536723 CD109Q6YHK3 1445 aa32.85■■■□□ 2.85
USP30-209ENST00000536723 MAGI3Q5TCQ9 1506 aa32.84■■■□□ 2.85
USP30-209ENST00000536723 KIAA0556O60303 1618 aa32.84■■■□□ 2.85
USP30-209ENST00000536723 KCNH8Q96L42 1107 aa32.83■■■□□ 2.85
USP30-209ENST00000536723 RAPGEF2Q9Y4G8 1499 aa32.78■■■□□ 2.84
USP30-209ENST00000536723 KIF21BO75037 1637 aa32.72■■■□□ 2.83
USP30-209ENST00000536723 CFAP43Q8NDM7 1665 aa32.72■■■□□ 2.83
USP30-209ENST00000536723 ABCA8O94911 1581 aa32.62■■■□□ 2.81
USP30-209ENST00000536723 PTPRMP28827 1452 aa32.61■■■□□ 2.81
USP30-209ENST00000536723 ARAP3Q8WWN8 1544 aa32.61■■■□□ 2.81
USP30-209ENST00000536723 GOLGA3Q08378 1498 aa32.55■■■□□ 2.8
USP30-209ENST00000536723 ADAMTSL3P82987 1691 aa32.53■■■□□ 2.8
USP30-209ENST00000536723 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
USP30-209ENST00000536723 RAPGEF3O95398 923 aa32.48■■■□□ 2.79
USP30-209ENST00000536723 PHLDB1Q86UU1 1377 aa32.45■■■□□ 2.79
USP30-209ENST00000536723 CTTNBP2Q8WZ74 1663 aa32.43■■■□□ 2.78
USP30-209ENST00000536723 PCF11O94913 1555 aaKnown RBP32.41■■■□□ 2.78
USP30-209ENST00000536723 ATP10BO94823 1461 aa32.41■■■□□ 2.78
USP30-209ENST00000536723 LMTK3Q96Q04 1460 aa32.4■■■□□ 2.78
USP30-209ENST00000536723 ARID4BQ4LE39 1312 aaPredicted RBP32.39■■■□□ 2.78
USP30-209ENST00000536723 ABCA9Q8IUA7 1624 aa32.34■■■□□ 2.77
USP30-209ENST00000536723 BCORL1Q5H9F3 1711 aa32.34■■■□□ 2.77
USP30-209ENST00000536723 MADDQ8WXG6 1647 aa32.33■■■□□ 2.77
USP30-209ENST00000536723 P3H3Q8IVL6 736 aa32.32■■■□□ 2.76
USP30-209ENST00000536723 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
USP30-209ENST00000536723 NEO1Q92859 1461 aa32.3■■■□□ 2.76
USP30-209ENST00000536723 HSPA2P54652 639 aa32.28■■■□□ 2.76
USP30-209ENST00000536723 FRMPD1Q5SYB0 1578 aa32.25■■■□□ 2.75
USP30-209ENST00000536723 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
USP30-209ENST00000536723 PLPPR3Q6T4P5 718 aa32.19■■■□□ 2.74
USP30-209ENST00000536723 CERKQ8TCT0 537 aa32.19■■■□□ 2.74
USP30-209ENST00000536723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.18■■■□□ 2.74
USP30-209ENST00000536723 HNRNPUL2Q1KMD3 747 aaKnown RBP32.18■■■□□ 2.74
USP30-209ENST00000536723 RIMS1Q86UR5 1692 aaKnown RBP32.17■■■□□ 2.74
USP30-209ENST00000536723 ARHGEF40Q8TER5 1519 aa32.11■■■□□ 2.73
USP30-209ENST00000536723 DENND4BO75064 1496 aaPredicted RBP32.1■■■□□ 2.73
USP30-209ENST00000536723 RAPGEF6Q8TEU7 1601 aa32.06■■■□□ 2.72
USP30-209ENST00000536723 FHOD3Q2V2M9 1422 aa32.05■■■□□ 2.72
USP30-209ENST00000536723 POGZQ7Z3K3 1410 aa32.04■■■□□ 2.72
USP30-209ENST00000536723 AKNAQ7Z591 1439 aa32.04■■■□□ 2.72
USP30-209ENST00000536723 ILDR2Q71H61 639 aa32.03■■■□□ 2.72
USP30-209ENST00000536723 RICTORQ6R327 1708 aa32.01■■■□□ 2.72
USP30-209ENST00000536723 NUP153P49790 1475 aaKnown RBP32.01■■■□□ 2.71
USP30-209ENST00000536723 FANCAO15360 1455 aa32■■■□□ 2.71
USP30-209ENST00000536723 SAMD9Q5K651 1589 aa31.99■■■□□ 2.71
USP30-209ENST00000536723 DISP3Q9P2K9 1392 aa31.98■■■□□ 2.71
USP30-209ENST00000536723 PLEKHD1A6NEE1 506 aa31.98■■■□□ 2.71
USP30-209ENST00000536723 MLECQ14165 292 aa31.98■■■□□ 2.71
USP30-209ENST00000536723 YEATS2Q9ULM3 1422 aa31.97■■■□□ 2.71
USP30-209ENST00000536723 SOCS7O14512 581 aa31.95■■■□□ 2.71
USP30-209ENST00000536723 SIGLEC1Q9BZZ2 1709 aa31.94■■■□□ 2.7
USP30-209ENST00000536723 ZMYM4Q5VZL5 1548 aa31.91■■■□□ 2.7
USP30-209ENST00000536723 ZFYVE16Q7Z3T8 1539 aa31.91■■■□□ 2.7
USP30-209ENST00000536723 EFCAB5A4FU69 1503 aa31.88■■■□□ 2.69
USP30-209ENST00000536723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.87■■■□□ 2.69
USP30-209ENST00000536723 MAGI2Q86UL8 1455 aa31.87■■■□□ 2.69
USP30-209ENST00000536723 RANGAP1P46060 587 aaPredicted RBP31.86■■■□□ 2.69
USP30-209ENST00000536723 CFAP74Q9C0B2 1584 aa31.85■■■□□ 2.69
USP30-209ENST00000536723 TTC37Q6PGP7 1564 aa31.84■■■□□ 2.69
USP30-209ENST00000536723 CSRNP3Q8WYN3 585 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms