RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
CLIP1-206ENST00000535290 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
CLIP1-206ENST00000535290 FHAD1B1AJZ9 1412 aa15.41■□□□□ 0.06
CLIP1-206ENST00000535290 KDM6BO15054 1643 aa15.4■□□□□ 0.06
CLIP1-206ENST00000535290 DIP2BQ9P265 1576 aa15.39■□□□□ 0.05
CLIP1-206ENST00000535290 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
CLIP1-206ENST00000535290 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
CLIP1-206ENST00000535290 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
CLIP1-206ENST00000535290 ADCY10Q96PN6 1610 aa15.3■□□□□ 0.04
CLIP1-206ENST00000535290 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
CLIP1-206ENST00000535290 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.03
CLIP1-206ENST00000535290 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
CLIP1-206ENST00000535290 FOXD1Q16676 465 aa15.22■□□□□ 0.03
CLIP1-206ENST00000535290 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
CLIP1-206ENST00000535290 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
CLIP1-206ENST00000535290 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
CLIP1-206ENST00000535290 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
CLIP1-206ENST00000535290 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
CLIP1-206ENST00000535290 PTPRGP23470 1445 aa15.15■□□□□ 0.02
CLIP1-206ENST00000535290 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
CLIP1-206ENST00000535290 KIAA0586Q9BVV6 1533 aa15.13■□□□□ 0.01
CLIP1-206ENST00000535290 BIVM-ERCC5R4GMW8 1640 aa15.13■□□□□ 0.01
CLIP1-206ENST00000535290 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
CLIP1-206ENST00000535290 ABCC2Q92887 1545 aa15.11■□□□□ 0.01
CLIP1-206ENST00000535290 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
CLIP1-206ENST00000535290 GLI2P10070 1586 aa15.1■□□□□ 0.01
CLIP1-206ENST00000535290 POTEDQ86YR6 584 aa15.06■□□□□ 0
CLIP1-206ENST00000535290 IGF1RP08069 1367 aa15.04■□□□□ -0
CLIP1-206ENST00000535290 TNIKQ9UKE5 1360 aa15.04■□□□□ -0
CLIP1-206ENST00000535290 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
CLIP1-206ENST00000535290 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
CLIP1-206ENST00000535290 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
CLIP1-206ENST00000535290 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
CLIP1-206ENST00000535290 UACAQ9BZF9 1416 aa14.99□□□□□ -0.01
CLIP1-206ENST00000535290 SUPT5HO00267 1087 aaKnown RBP14.98□□□□□ -0.01
CLIP1-206ENST00000535290 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
CLIP1-206ENST00000535290 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.01
CLIP1-206ENST00000535290 CUL7Q14999 1698 aa14.95□□□□□ -0.02
CLIP1-206ENST00000535290 KDM5BQ9UGL1 1544 aa14.95□□□□□ -0.02
CLIP1-206ENST00000535290 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
CLIP1-206ENST00000535290 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
CLIP1-206ENST00000535290 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
CLIP1-206ENST00000535290 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
CLIP1-206ENST00000535290 CD109Q6YHK3 1445 aa14.87□□□□□ -0.03
CLIP1-206ENST00000535290 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
CLIP1-206ENST00000535290 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
CLIP1-206ENST00000535290 PTPRMP28827 1452 aa14.86□□□□□ -0.03
CLIP1-206ENST00000535290 ZCCHC11Q5TAX3 1644 aaKnown RBP14.85□□□□□ -0.03
CLIP1-206ENST00000535290 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
CLIP1-206ENST00000535290 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
CLIP1-206ENST00000535290 SOCS7O14512 581 aa14.84□□□□□ -0.03
CLIP1-206ENST00000535290 KIF21BO75037 1637 aa14.84□□□□□ -0.03
CLIP1-206ENST00000535290 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
CLIP1-206ENST00000535290 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
CLIP1-206ENST00000535290 HSPA2P54652 639 aa14.77□□□□□ -0.05
CLIP1-206ENST00000535290 CERKQ8TCT0 537 aa14.77□□□□□ -0.05
CLIP1-206ENST00000535290 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.05
CLIP1-206ENST00000535290 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
CLIP1-206ENST00000535290 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
CLIP1-206ENST00000535290 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
CLIP1-206ENST00000535290 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
CLIP1-206ENST00000535290 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
CLIP1-206ENST00000535290 KIAA0556O60303 1618 aa14.72□□□□□ -0.05
CLIP1-206ENST00000535290 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
CLIP1-206ENST00000535290 ARID3CA6NKF2 412 aa14.67□□□□□ -0.06
CLIP1-206ENST00000535290 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
CLIP1-206ENST00000535290 ABCA8O94911 1581 aa14.65□□□□□ -0.06
CLIP1-206ENST00000535290 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
CLIP1-206ENST00000535290 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
CLIP1-206ENST00000535290 BCORL1Q5H9F3 1711 aa14.65□□□□□ -0.06
CLIP1-206ENST00000535290 ATP10BO94823 1461 aa14.58□□□□□ -0.08
CLIP1-206ENST00000535290 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.08
CLIP1-206ENST00000535290 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
CLIP1-206ENST00000535290 NEO1Q92859 1461 aa14.57□□□□□ -0.08
CLIP1-206ENST00000535290 FRMPD1Q5SYB0 1578 aa14.57□□□□□ -0.08
CLIP1-206ENST00000535290 ABCA9Q8IUA7 1624 aa14.55□□□□□ -0.08
CLIP1-206ENST00000535290 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
CLIP1-206ENST00000535290 MLECQ14165 292 aa14.53□□□□□ -0.08
CLIP1-206ENST00000535290 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
CLIP1-206ENST00000535290 ARHGEF40Q8TER5 1519 aa14.51□□□□□ -0.09
CLIP1-206ENST00000535290 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
CLIP1-206ENST00000535290 YEATS2Q9ULM3 1422 aa14.49□□□□□ -0.09
CLIP1-206ENST00000535290 DENND4BO75064 1496 aaPredicted RBP14.49□□□□□ -0.09
CLIP1-206ENST00000535290 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
CLIP1-206ENST00000535290 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
CLIP1-206ENST00000535290 AKNAQ7Z591 1439 aa14.48□□□□□ -0.09
CLIP1-206ENST00000535290 FANCAO15360 1455 aa14.47□□□□□ -0.09
CLIP1-206ENST00000535290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
CLIP1-206ENST00000535290 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
CLIP1-206ENST00000535290 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
CLIP1-206ENST00000535290 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
CLIP1-206ENST00000535290 SIGLEC1Q9BZZ2 1709 aa14.44□□□□□ -0.1
CLIP1-206ENST00000535290 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
CLIP1-206ENST00000535290 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
CLIP1-206ENST00000535290 TTC37Q6PGP7 1564 aa14.41□□□□□ -0.1
CLIP1-206ENST00000535290 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
CLIP1-206ENST00000535290 STRCQ7RTU9 1775 aa14.39□□□□□ -0.11
CLIP1-206ENST00000535290 ZMYM4Q5VZL5 1548 aa14.39□□□□□ -0.11
CLIP1-206ENST00000535290 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
CLIP1-206ENST00000535290 EFCAB5A4FU69 1503 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms