RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
NPIPB3-207ENST00000535190 KIF27Q86VH2 1401 aa13.96□□□□□ -0.18
NPIPB3-207ENST00000535190 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
NPIPB3-207ENST00000535190 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
NPIPB3-207ENST00000535190 RUSC2Q8N2Y8 1516 aa13.91□□□□□ -0.18
NPIPB3-207ENST00000535190 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
NPIPB3-207ENST00000535190 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
NPIPB3-207ENST00000535190 CUL7Q14999 1698 aa13.87□□□□□ -0.19
NPIPB3-207ENST00000535190 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
NPIPB3-207ENST00000535190 ADCY10Q96PN6 1610 aa13.77□□□□□ -0.21
NPIPB3-207ENST00000535190 PTPRGP23470 1445 aa13.75□□□□□ -0.21
NPIPB3-207ENST00000535190 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
NPIPB3-207ENST00000535190 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
NPIPB3-207ENST00000535190 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
NPIPB3-207ENST00000535190 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
NPIPB3-207ENST00000535190 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
NPIPB3-207ENST00000535190 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
NPIPB3-207ENST00000535190 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
NPIPB3-207ENST00000535190 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
NPIPB3-207ENST00000535190 CARMIL2Q6F5E8 1435 aa13.7□□□□□ -0.22
NPIPB3-207ENST00000535190 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
NPIPB3-207ENST00000535190 DIP2BQ9P265 1576 aa13.67□□□□□ -0.22
NPIPB3-207ENST00000535190 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
NPIPB3-207ENST00000535190 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
NPIPB3-207ENST00000535190 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
NPIPB3-207ENST00000535190 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
NPIPB3-207ENST00000535190 UACAQ9BZF9 1416 aa13.64□□□□□ -0.23
NPIPB3-207ENST00000535190 KDM5BQ9UGL1 1544 aa13.61□□□□□ -0.23
NPIPB3-207ENST00000535190 KIAA0556O60303 1618 aa13.61□□□□□ -0.23
NPIPB3-207ENST00000535190 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
NPIPB3-207ENST00000535190 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
NPIPB3-207ENST00000535190 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
NPIPB3-207ENST00000535190 GLI2P10070 1586 aa13.58□□□□□ -0.24
NPIPB3-207ENST00000535190 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
NPIPB3-207ENST00000535190 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
NPIPB3-207ENST00000535190 PPRC1Q5VV67 1664 aaKnown RBP13.54□□□□□ -0.24
NPIPB3-207ENST00000535190 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
NPIPB3-207ENST00000535190 EPRSP07814 1512 aaKnown RBP13.53□□□□□ -0.24
NPIPB3-207ENST00000535190 ABCA8O94911 1581 aa13.53□□□□□ -0.24
NPIPB3-207ENST00000535190 ZCCHC11Q5TAX3 1644 aaKnown RBP13.52□□□□□ -0.25
NPIPB3-207ENST00000535190 COL17A1Q9UMD9 1497 aaPredicted RBP13.5□□□□□ -0.25
NPIPB3-207ENST00000535190 KDM6BO15054 1643 aa13.5□□□□□ -0.25
NPIPB3-207ENST00000535190 EEA1Q15075 1411 aa13.47□□□□□ -0.25
NPIPB3-207ENST00000535190 MAP3K4Q9Y6R4 1608 aa13.47□□□□□ -0.25
NPIPB3-207ENST00000535190 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
NPIPB3-207ENST00000535190 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
NPIPB3-207ENST00000535190 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.25
NPIPB3-207ENST00000535190 ATP10BO94823 1461 aa13.44□□□□□ -0.26
NPIPB3-207ENST00000535190 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
NPIPB3-207ENST00000535190 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
NPIPB3-207ENST00000535190 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
NPIPB3-207ENST00000535190 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
NPIPB3-207ENST00000535190 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
NPIPB3-207ENST00000535190 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
NPIPB3-207ENST00000535190 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
NPIPB3-207ENST00000535190 KIF21BO75037 1637 aa13.36□□□□□ -0.27
NPIPB3-207ENST00000535190 CFAP43Q8NDM7 1665 aa13.36□□□□□ -0.27
NPIPB3-207ENST00000535190 FHOD3Q2V2M9 1422 aa13.34□□□□□ -0.27
NPIPB3-207ENST00000535190 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
NPIPB3-207ENST00000535190 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
NPIPB3-207ENST00000535190 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
NPIPB3-207ENST00000535190 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
NPIPB3-207ENST00000535190 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
NPIPB3-207ENST00000535190 EFCAB5A4FU69 1503 aa13.28□□□□□ -0.28
NPIPB3-207ENST00000535190 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.29
NPIPB3-207ENST00000535190 ADGRL1O94910 1474 aa13.27□□□□□ -0.29
NPIPB3-207ENST00000535190 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
NPIPB3-207ENST00000535190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
NPIPB3-207ENST00000535190 UBTFP17480 764 aaKnown RBP13.25□□□□□ -0.29
NPIPB3-207ENST00000535190 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
NPIPB3-207ENST00000535190 ARHGAP35Q9NRY4 1499 aa13.24□□□□□ -0.29
NPIPB3-207ENST00000535190 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
NPIPB3-207ENST00000535190 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
NPIPB3-207ENST00000535190 NEO1Q92859 1461 aa13.23□□□□□ -0.29
NPIPB3-207ENST00000535190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
NPIPB3-207ENST00000535190 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
NPIPB3-207ENST00000535190 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
NPIPB3-207ENST00000535190 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
NPIPB3-207ENST00000535190 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
NPIPB3-207ENST00000535190 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
NPIPB3-207ENST00000535190 PLCH2O75038 1416 aa13.13□□□□□ -0.31
NPIPB3-207ENST00000535190 FANCAO15360 1455 aa13.12□□□□□ -0.31
NPIPB3-207ENST00000535190 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
NPIPB3-207ENST00000535190 RICTORQ6R327 1708 aa13.11□□□□□ -0.31
NPIPB3-207ENST00000535190 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
NPIPB3-207ENST00000535190 ATP1B4Q9UN42 357 aaPredicted RBP13.11□□□□□ -0.31
NPIPB3-207ENST00000535190 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
NPIPB3-207ENST00000535190 HECW1Q76N89 1606 aa13.1□□□□□ -0.31
NPIPB3-207ENST00000535190 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
NPIPB3-207ENST00000535190 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
NPIPB3-207ENST00000535190 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
NPIPB3-207ENST00000535190 SCAPERQ9BY12 1400 aa13.07□□□□□ -0.32
NPIPB3-207ENST00000535190 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
NPIPB3-207ENST00000535190 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
NPIPB3-207ENST00000535190 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
NPIPB3-207ENST00000535190 KIF14Q15058 1648 aa13.06□□□□□ -0.32
NPIPB3-207ENST00000535190 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
NPIPB3-207ENST00000535190 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
NPIPB3-207ENST00000535190 PTPRMP28827 1452 aa13.05□□□□□ -0.32
NPIPB3-207ENST00000535190 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms