RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
CLSTN3-203ENST00000534830 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
CLSTN3-203ENST00000534830 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
CLSTN3-203ENST00000534830 JPH4Q96JJ6 628 aa17.88■□□□□ 0.45
CLSTN3-203ENST00000534830 KDM6BO15054 1643 aa17.87■□□□□ 0.45
CLSTN3-203ENST00000534830 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
CLSTN3-203ENST00000534830 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
CLSTN3-203ENST00000534830 TSPOAP1O95153 1857 aa17.82■□□□□ 0.44
CLSTN3-203ENST00000534830 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
CLSTN3-203ENST00000534830 ADCY10Q96PN6 1610 aa17.77■□□□□ 0.44
CLSTN3-203ENST00000534830 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
CLSTN3-203ENST00000534830 ADGRL1O94910 1474 aa17.66■□□□□ 0.42
CLSTN3-203ENST00000534830 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
CLSTN3-203ENST00000534830 HECW2Q9P2P5 1572 aa17.6■□□□□ 0.41
CLSTN3-203ENST00000534830 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.41
CLSTN3-203ENST00000534830 PTPRGP23470 1445 aa17.57■□□□□ 0.4
CLSTN3-203ENST00000534830 IGF1RP08069 1367 aa17.57■□□□□ 0.4
CLSTN3-203ENST00000534830 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-203ENST00000534830 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
CLSTN3-203ENST00000534830 ASXL2Q76L83 1435 aa17.54■□□□□ 0.4
CLSTN3-203ENST00000534830 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
CLSTN3-203ENST00000534830 PLB1Q6P1J6 1458 aa17.52■□□□□ 0.4
CLSTN3-203ENST00000534830 CUL7Q14999 1698 aa17.52■□□□□ 0.39
CLSTN3-203ENST00000534830 GLI2P10070 1586 aa17.51■□□□□ 0.39
CLSTN3-203ENST00000534830 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
CLSTN3-203ENST00000534830 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
CLSTN3-203ENST00000534830 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
CLSTN3-203ENST00000534830 CARMIL1Q5VZK9 1371 aa17.43■□□□□ 0.38
CLSTN3-203ENST00000534830 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
CLSTN3-203ENST00000534830 TEX14Q8IWB6 1497 aa17.43■□□□□ 0.38
CLSTN3-203ENST00000534830 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
CLSTN3-203ENST00000534830 MAP3K4Q9Y6R4 1608 aa17.41■□□□□ 0.38
CLSTN3-203ENST00000534830 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
CLSTN3-203ENST00000534830 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
CLSTN3-203ENST00000534830 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
CLSTN3-203ENST00000534830 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
CLSTN3-203ENST00000534830 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-203ENST00000534830 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
CLSTN3-203ENST00000534830 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
CLSTN3-203ENST00000534830 WDR7Q9Y4E6 1490 aa17.26■□□□□ 0.35
CLSTN3-203ENST00000534830 KIF21BO75037 1637 aa17.25■□□□□ 0.35
CLSTN3-203ENST00000534830 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
CLSTN3-203ENST00000534830 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
CLSTN3-203ENST00000534830 MAGI3Q5TCQ9 1506 aa17.21■□□□□ 0.35
CLSTN3-203ENST00000534830 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.35
CLSTN3-203ENST00000534830 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
CLSTN3-203ENST00000534830 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
CLSTN3-203ENST00000534830 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
CLSTN3-203ENST00000534830 PTPRMP28827 1452 aa17.16■□□□□ 0.34
CLSTN3-203ENST00000534830 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
CLSTN3-203ENST00000534830 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
CLSTN3-203ENST00000534830 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
CLSTN3-203ENST00000534830 ARAP3Q8WWN8 1544 aa17.09■□□□□ 0.33
CLSTN3-203ENST00000534830 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-203ENST00000534830 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
CLSTN3-203ENST00000534830 SOCS7O14512 581 aa17.06■□□□□ 0.32
CLSTN3-203ENST00000534830 ABCA8O94911 1581 aa17.06■□□□□ 0.32
CLSTN3-203ENST00000534830 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
CLSTN3-203ENST00000534830 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
CLSTN3-203ENST00000534830 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
CLSTN3-203ENST00000534830 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
CLSTN3-203ENST00000534830 BCORL1Q5H9F3 1711 aa17.03■□□□□ 0.32
CLSTN3-203ENST00000534830 MADDQ8WXG6 1647 aa17.03■□□□□ 0.32
CLSTN3-203ENST00000534830 HSPA2P54652 639 aa17.01■□□□□ 0.31
CLSTN3-203ENST00000534830 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
CLSTN3-203ENST00000534830 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
CLSTN3-203ENST00000534830 EEA1Q15075 1411 aa16.99■□□□□ 0.31
CLSTN3-203ENST00000534830 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
CLSTN3-203ENST00000534830 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
CLSTN3-203ENST00000534830 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
CLSTN3-203ENST00000534830 ILDR2Q71H61 639 aa16.97■□□□□ 0.31
CLSTN3-203ENST00000534830 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
CLSTN3-203ENST00000534830 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
CLSTN3-203ENST00000534830 ATP10BO94823 1461 aa16.94■□□□□ 0.3
CLSTN3-203ENST00000534830 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
CLSTN3-203ENST00000534830 NEO1Q92859 1461 aa16.93■□□□□ 0.3
CLSTN3-203ENST00000534830 FRMPD1Q5SYB0 1578 aa16.92■□□□□ 0.3
CLSTN3-203ENST00000534830 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
CLSTN3-203ENST00000534830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
CLSTN3-203ENST00000534830 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-203ENST00000534830 ARHGEF40Q8TER5 1519 aa16.87■□□□□ 0.29
CLSTN3-203ENST00000534830 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
CLSTN3-203ENST00000534830 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
CLSTN3-203ENST00000534830 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
CLSTN3-203ENST00000534830 FANCAO15360 1455 aa16.83■□□□□ 0.28
CLSTN3-203ENST00000534830 MLECQ14165 292 aa16.83■□□□□ 0.28
CLSTN3-203ENST00000534830 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
CLSTN3-203ENST00000534830 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
CLSTN3-203ENST00000534830 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
CLSTN3-203ENST00000534830 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
CLSTN3-203ENST00000534830 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
CLSTN3-203ENST00000534830 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.27
CLSTN3-203ENST00000534830 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
CLSTN3-203ENST00000534830 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
CLSTN3-203ENST00000534830 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
CLSTN3-203ENST00000534830 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
CLSTN3-203ENST00000534830 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CLSTN3-203ENST00000534830 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
CLSTN3-203ENST00000534830 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
CLSTN3-203ENST00000534830 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms