RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
LMO1-204ENST00000534484 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
LMO1-204ENST00000534484 MAP3K1Q13233 1512 aa20.9■□□□□ 0.94
LMO1-204ENST00000534484 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.93
LMO1-204ENST00000534484 HRCP23327 699 aa20.87■□□□□ 0.93
LMO1-204ENST00000534484 RANGAP1P46060 587 aaPredicted RBP20.87■□□□□ 0.93
LMO1-204ENST00000534484 MAGI1Q96QZ7 1491 aaPredicted RBP20.85■□□□□ 0.93
LMO1-204ENST00000534484 APLP2Q06481 763 aa20.83■□□□□ 0.93
LMO1-204ENST00000534484 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
LMO1-204ENST00000534484 IQGAP2Q13576 1575 aa20.8■□□□□ 0.92
LMO1-204ENST00000534484 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
LMO1-204ENST00000534484 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.92
LMO1-204ENST00000534484 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
LMO1-204ENST00000534484 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
LMO1-204ENST00000534484 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
LMO1-204ENST00000534484 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
LMO1-204ENST00000534484 FHOD3Q2V2M9 1422 aa20.75■□□□□ 0.91
LMO1-204ENST00000534484 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
LMO1-204ENST00000534484 CASKIN1Q8WXD9 1431 aa20.75■□□□□ 0.91
LMO1-204ENST00000534484 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
LMO1-204ENST00000534484 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
LMO1-204ENST00000534484 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
LMO1-204ENST00000534484 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
LMO1-204ENST00000534484 NUP160Q12769 1436 aa20.65■□□□□ 0.9
LMO1-204ENST00000534484 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
LMO1-204ENST00000534484 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
LMO1-204ENST00000534484 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
LMO1-204ENST00000534484 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
LMO1-204ENST00000534484 LRRIQ1Q96JM4 1722 aa20.6■□□□□ 0.89
LMO1-204ENST00000534484 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
LMO1-204ENST00000534484 DISP1Q96F81 1524 aa20.58■□□□□ 0.89
LMO1-204ENST00000534484 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
LMO1-204ENST00000534484 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
LMO1-204ENST00000534484 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
LMO1-204ENST00000534484 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
LMO1-204ENST00000534484 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
LMO1-204ENST00000534484 CHD1O14646 1710 aa20.47■□□□□ 0.87
LMO1-204ENST00000534484 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
LMO1-204ENST00000534484 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
LMO1-204ENST00000534484 EPRSP07814 1512 aaKnown RBP20.43■□□□□ 0.86
LMO1-204ENST00000534484 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
LMO1-204ENST00000534484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
LMO1-204ENST00000534484 CARMIL2Q6F5E8 1435 aa20.42■□□□□ 0.86
LMO1-204ENST00000534484 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
LMO1-204ENST00000534484 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
LMO1-204ENST00000534484 SHROOM2Q13796 1616 aa20.39■□□□□ 0.86
LMO1-204ENST00000534484 JPH4Q96JJ6 628 aa20.39■□□□□ 0.85
LMO1-204ENST00000534484 FBLN2P98095 1184 aa20.38■□□□□ 0.85
LMO1-204ENST00000534484 MAGI3Q5TCQ9 1506 aa20.37■□□□□ 0.85
LMO1-204ENST00000534484 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
LMO1-204ENST00000534484 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
LMO1-204ENST00000534484 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
LMO1-204ENST00000534484 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
LMO1-204ENST00000534484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
LMO1-204ENST00000534484 NCOA2Q15596 1464 aa20.33■□□□□ 0.85
LMO1-204ENST00000534484 ABCA8O94911 1581 aa20.31■□□□□ 0.84
LMO1-204ENST00000534484 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
LMO1-204ENST00000534484 CDK13Q14004 1512 aaKnown RBP20.31■□□□□ 0.84
LMO1-204ENST00000534484 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
LMO1-204ENST00000534484 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
LMO1-204ENST00000534484 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
LMO1-204ENST00000534484 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
LMO1-204ENST00000534484 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
LMO1-204ENST00000534484 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
LMO1-204ENST00000534484 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
LMO1-204ENST00000534484 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
LMO1-204ENST00000534484 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
LMO1-204ENST00000534484 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
LMO1-204ENST00000534484 TROQ12816 1431 aaPredicted RBP20.18■□□□□ 0.82
LMO1-204ENST00000534484 CDK11AQ9UQ88 783 aaPredicted RBP20.17■□□□□ 0.82
LMO1-204ENST00000534484 PTPRGP23470 1445 aa20.16■□□□□ 0.82
LMO1-204ENST00000534484 SETD5Q9C0A6 1442 aa20.14■□□□□ 0.81
LMO1-204ENST00000534484 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
LMO1-204ENST00000534484 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
LMO1-204ENST00000534484 ATP10BO94823 1461 aa20.12■□□□□ 0.81
LMO1-204ENST00000534484 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
LMO1-204ENST00000534484 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
LMO1-204ENST00000534484 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
LMO1-204ENST00000534484 UACAQ9BZF9 1416 aa20.08■□□□□ 0.8
LMO1-204ENST00000534484 PTPRKQ15262 1439 aa20.06■□□□□ 0.8
LMO1-204ENST00000534484 AKNAQ7Z591 1439 aa20.06■□□□□ 0.8
LMO1-204ENST00000534484 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
LMO1-204ENST00000534484 KIF14Q15058 1648 aa20.05■□□□□ 0.8
LMO1-204ENST00000534484 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
LMO1-204ENST00000534484 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
LMO1-204ENST00000534484 ITGAEP38570 1179 aa20.04■□□□□ 0.8
LMO1-204ENST00000534484 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
LMO1-204ENST00000534484 GCC2Q8IWJ2 1684 aa20.02■□□□□ 0.8
LMO1-204ENST00000534484 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.79
LMO1-204ENST00000534484 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
LMO1-204ENST00000534484 GPATCH8Q9UKJ3 1502 aaKnown RBP20.01■□□□□ 0.79
LMO1-204ENST00000534484 CDC42BPAQ5VT25 1732 aa20■□□□□ 0.79
LMO1-204ENST00000534484 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
LMO1-204ENST00000534484 NAIPQ13075 1403 aa19.98■□□□□ 0.79
LMO1-204ENST00000534484 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
LMO1-204ENST00000534484 KDM5BQ9UGL1 1544 aa19.94■□□□□ 0.78
LMO1-204ENST00000534484 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
LMO1-204ENST00000534484 DAPK1P53355 1430 aa19.93■□□□□ 0.78
LMO1-204ENST00000534484 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
LMO1-204ENST00000534484 CROCC2H7BZ55 1655 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms