RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 FAM69CQ0P6D2 419 aa22.71■■□□□ 1.23
KNL1-212ENST00000534204 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
KNL1-212ENST00000534204 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
KNL1-212ENST00000534204 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
KNL1-212ENST00000534204 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
KNL1-212ENST00000534204 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
KNL1-212ENST00000534204 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
KNL1-212ENST00000534204 PPRC1Q5VV67 1664 aaKnown RBP22.59■■□□□ 1.21
KNL1-212ENST00000534204 HECW2Q9P2P5 1572 aa22.58■■□□□ 1.2
KNL1-212ENST00000534204 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
KNL1-212ENST00000534204 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
KNL1-212ENST00000534204 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
KNL1-212ENST00000534204 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
KNL1-212ENST00000534204 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
KNL1-212ENST00000534204 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
KNL1-212ENST00000534204 GLI2P10070 1586 aa22.4■■□□□ 1.18
KNL1-212ENST00000534204 MAP3K4Q9Y6R4 1608 aa22.31■■□□□ 1.16
KNL1-212ENST00000534204 KIAA0586Q9BVV6 1533 aa22.31■■□□□ 1.16
KNL1-212ENST00000534204 CUL7Q14999 1698 aa22.3■■□□□ 1.16
KNL1-212ENST00000534204 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
KNL1-212ENST00000534204 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
KNL1-212ENST00000534204 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
KNL1-212ENST00000534204 FBXO41Q8TF61 875 aa22.19■■□□□ 1.14
KNL1-212ENST00000534204 PTPRGP23470 1445 aa22.18■■□□□ 1.14
KNL1-212ENST00000534204 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
KNL1-212ENST00000534204 UHRF1BP1LA0JNW5 1464 aa22.17■■□□□ 1.14
KNL1-212ENST00000534204 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
KNL1-212ENST00000534204 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
KNL1-212ENST00000534204 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
KNL1-212ENST00000534204 TEX14Q8IWB6 1497 aa22.09■■□□□ 1.13
KNL1-212ENST00000534204 IGF1RP08069 1367 aa22.09■■□□□ 1.13
KNL1-212ENST00000534204 KIF21BO75037 1637 aa22.06■■□□□ 1.12
KNL1-212ENST00000534204 UACAQ9BZF9 1416 aa22.04■■□□□ 1.12
KNL1-212ENST00000534204 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
KNL1-212ENST00000534204 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
KNL1-212ENST00000534204 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
KNL1-212ENST00000534204 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
KNL1-212ENST00000534204 ADAMTSL3P82987 1691 aa21.95■■□□□ 1.1
KNL1-212ENST00000534204 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
KNL1-212ENST00000534204 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
KNL1-212ENST00000534204 WDR7Q9Y4E6 1490 aa21.92■■□□□ 1.1
KNL1-212ENST00000534204 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
KNL1-212ENST00000534204 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
KNL1-212ENST00000534204 PTPRMP28827 1452 aa21.88■■□□□ 1.09
KNL1-212ENST00000534204 LMTK3Q96Q04 1460 aa21.88■■□□□ 1.09
KNL1-212ENST00000534204 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
KNL1-212ENST00000534204 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
KNL1-212ENST00000534204 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
KNL1-212ENST00000534204 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
KNL1-212ENST00000534204 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
KNL1-212ENST00000534204 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
KNL1-212ENST00000534204 BCORL1Q5H9F3 1711 aa21.79■■□□□ 1.08
KNL1-212ENST00000534204 MADDQ8WXG6 1647 aa21.78■■□□□ 1.08
KNL1-212ENST00000534204 ABCA8O94911 1581 aa21.75■■□□□ 1.07
KNL1-212ENST00000534204 ILDR2Q71H61 639 aa21.73■■□□□ 1.07
KNL1-212ENST00000534204 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
KNL1-212ENST00000534204 RIMS1Q86UR5 1692 aaKnown RBP21.66■■□□□ 1.06
KNL1-212ENST00000534204 SOCS7O14512 581 aa21.64■■□□□ 1.05
KNL1-212ENST00000534204 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
KNL1-212ENST00000534204 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
KNL1-212ENST00000534204 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
KNL1-212ENST00000534204 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
KNL1-212ENST00000534204 SIGLEC1Q9BZZ2 1709 aa21.59■■□□□ 1.05
KNL1-212ENST00000534204 CERKQ8TCT0 537 aa21.56■■□□□ 1.04
KNL1-212ENST00000534204 ARHGEF40Q8TER5 1519 aa21.55■■□□□ 1.04
KNL1-212ENST00000534204 HSPA2P54652 639 aa21.55■■□□□ 1.04
KNL1-212ENST00000534204 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
KNL1-212ENST00000534204 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
KNL1-212ENST00000534204 RICTORQ6R327 1708 aa21.52■■□□□ 1.03
KNL1-212ENST00000534204 NEO1Q92859 1461 aa21.51■■□□□ 1.03
KNL1-212ENST00000534204 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
KNL1-212ENST00000534204 SPATA31D1Q6ZQQ2 1576 aa21.5■■□□□ 1.03
KNL1-212ENST00000534204 ATP10BO94823 1461 aa21.48■■□□□ 1.03
KNL1-212ENST00000534204 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
KNL1-212ENST00000534204 STRCQ7RTU9 1775 aa21.43■■□□□ 1.02
KNL1-212ENST00000534204 TTC37Q6PGP7 1564 aa21.43■■□□□ 1.02
KNL1-212ENST00000534204 FER1L4A9Z1Z3 1794 aa21.41■■□□□ 1.02
KNL1-212ENST00000534204 PREX1Q8TCU6 1659 aa21.38■■□□□ 1.01
KNL1-212ENST00000534204 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
KNL1-212ENST00000534204 ZMYM4Q5VZL5 1548 aa21.38■■□□□ 1.01
KNL1-212ENST00000534204 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
KNL1-212ENST00000534204 FHOD3Q2V2M9 1422 aa21.33■■□□□ 1.01
KNL1-212ENST00000534204 FANCAO15360 1455 aa21.32■■□□□ 1
KNL1-212ENST00000534204 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
KNL1-212ENST00000534204 RAPGEF6Q8TEU7 1601 aa21.3■■□□□ 1
KNL1-212ENST00000534204 DENND4BO75064 1496 aaPredicted RBP21.3■■□□□ 1
KNL1-212ENST00000534204 ZFYVE16Q7Z3T8 1539 aa21.29■■□□□ 1
KNL1-212ENST00000534204 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
KNL1-212ENST00000534204 SAMD9Q5K651 1589 aa21.27■■□□□ 1
KNL1-212ENST00000534204 EFCAB5A4FU69 1503 aa21.26■□□□□ 0.99
KNL1-212ENST00000534204 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
KNL1-212ENST00000534204 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
KNL1-212ENST00000534204 CFAP74Q9C0B2 1584 aa21.26■□□□□ 0.99
KNL1-212ENST00000534204 POGZQ7Z3K3 1410 aa21.25■□□□□ 0.99
KNL1-212ENST00000534204 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
KNL1-212ENST00000534204 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
KNL1-212ENST00000534204 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
KNL1-212ENST00000534204 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
KNL1-212ENST00000534204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
KNL1-212ENST00000534204 MAGI2Q86UL8 1455 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms