RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
PACS1-214ENST00000533811 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
PACS1-214ENST00000533811 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
PACS1-214ENST00000533811 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
PACS1-214ENST00000533811 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
PACS1-214ENST00000533811 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
PACS1-214ENST00000533811 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
PACS1-214ENST00000533811 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
PACS1-214ENST00000533811 KDM6BO15054 1643 aa16.52■□□□□ 0.23
PACS1-214ENST00000533811 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
PACS1-214ENST00000533811 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
PACS1-214ENST00000533811 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
PACS1-214ENST00000533811 CUL7Q14999 1698 aa16.4■□□□□ 0.22
PACS1-214ENST00000533811 PTPRGP23470 1445 aa16.37■□□□□ 0.21
PACS1-214ENST00000533811 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
PACS1-214ENST00000533811 IGF1RP08069 1367 aa16.37■□□□□ 0.21
PACS1-214ENST00000533811 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
PACS1-214ENST00000533811 ABCC2Q92887 1545 aa16.31■□□□□ 0.2
PACS1-214ENST00000533811 ASXL2Q76L83 1435 aa16.3■□□□□ 0.2
PACS1-214ENST00000533811 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
PACS1-214ENST00000533811 PPRC1Q5VV67 1664 aaKnown RBP16.3■□□□□ 0.2
PACS1-214ENST00000533811 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
PACS1-214ENST00000533811 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
PACS1-214ENST00000533811 IQGAP2Q13576 1575 aa16.28■□□□□ 0.2
PACS1-214ENST00000533811 PLB1Q6P1J6 1458 aa16.28■□□□□ 0.2
PACS1-214ENST00000533811 ADGRL1O94910 1474 aa16.27■□□□□ 0.19
PACS1-214ENST00000533811 GLI2P10070 1586 aa16.26■□□□□ 0.19
PACS1-214ENST00000533811 UACAQ9BZF9 1416 aa16.22■□□□□ 0.19
PACS1-214ENST00000533811 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
PACS1-214ENST00000533811 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
PACS1-214ENST00000533811 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
PACS1-214ENST00000533811 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
PACS1-214ENST00000533811 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
PACS1-214ENST00000533811 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
PACS1-214ENST00000533811 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
PACS1-214ENST00000533811 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
PACS1-214ENST00000533811 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
PACS1-214ENST00000533811 KIAA0556O60303 1618 aa16.13■□□□□ 0.17
PACS1-214ENST00000533811 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
PACS1-214ENST00000533811 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
PACS1-214ENST00000533811 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
PACS1-214ENST00000533811 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
PACS1-214ENST00000533811 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
PACS1-214ENST00000533811 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
PACS1-214ENST00000533811 CD109Q6YHK3 1445 aa16.03■□□□□ 0.16
PACS1-214ENST00000533811 KIF21BO75037 1637 aa16.01■□□□□ 0.15
PACS1-214ENST00000533811 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
PACS1-214ENST00000533811 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
PACS1-214ENST00000533811 ABCA8O94911 1581 aa15.98■□□□□ 0.15
PACS1-214ENST00000533811 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
PACS1-214ENST00000533811 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
PACS1-214ENST00000533811 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
PACS1-214ENST00000533811 ARAP3Q8WWN8 1544 aa15.88■□□□□ 0.13
PACS1-214ENST00000533811 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
PACS1-214ENST00000533811 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
PACS1-214ENST00000533811 ATP10BO94823 1461 aa15.84■□□□□ 0.13
PACS1-214ENST00000533811 PTPRMP28827 1452 aa15.84■□□□□ 0.13
PACS1-214ENST00000533811 ABCA9Q8IUA7 1624 aa15.83■□□□□ 0.13
PACS1-214ENST00000533811 RAPGEF3O95398 923 aa15.83■□□□□ 0.12
PACS1-214ENST00000533811 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
PACS1-214ENST00000533811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
PACS1-214ENST00000533811 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
PACS1-214ENST00000533811 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
PACS1-214ENST00000533811 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
PACS1-214ENST00000533811 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
PACS1-214ENST00000533811 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
PACS1-214ENST00000533811 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
PACS1-214ENST00000533811 NEO1Q92859 1461 aa15.78■□□□□ 0.12
PACS1-214ENST00000533811 FRMPD1Q5SYB0 1578 aa15.77■□□□□ 0.11
PACS1-214ENST00000533811 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
PACS1-214ENST00000533811 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
PACS1-214ENST00000533811 RIMS1Q86UR5 1692 aaKnown RBP15.76■□□□□ 0.11
PACS1-214ENST00000533811 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
PACS1-214ENST00000533811 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
PACS1-214ENST00000533811 ARHGEF40Q8TER5 1519 aa15.72■□□□□ 0.11
PACS1-214ENST00000533811 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.11
PACS1-214ENST00000533811 RICTORQ6R327 1708 aa15.69■□□□□ 0.1
PACS1-214ENST00000533811 DENND4BO75064 1496 aaPredicted RBP15.69■□□□□ 0.1
PACS1-214ENST00000533811 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
PACS1-214ENST00000533811 HSPA2P54652 639 aa15.68■□□□□ 0.1
PACS1-214ENST00000533811 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
PACS1-214ENST00000533811 CFAP74Q9C0B2 1584 aa15.66■□□□□ 0.1
PACS1-214ENST00000533811 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
PACS1-214ENST00000533811 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
PACS1-214ENST00000533811 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PACS1-214ENST00000533811 FANCAO15360 1455 aa15.65■□□□□ 0.1
PACS1-214ENST00000533811 MLECQ14165 292 aa15.64■□□□□ 0.09
PACS1-214ENST00000533811 POGZQ7Z3K3 1410 aa15.64■□□□□ 0.09
PACS1-214ENST00000533811 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
PACS1-214ENST00000533811 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
PACS1-214ENST00000533811 SIGLEC1Q9BZZ2 1709 aa15.62■□□□□ 0.09
PACS1-214ENST00000533811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.09
PACS1-214ENST00000533811 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
PACS1-214ENST00000533811 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
PACS1-214ENST00000533811 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
PACS1-214ENST00000533811 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
PACS1-214ENST00000533811 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
PACS1-214ENST00000533811 CERKQ8TCT0 537 aa15.56■□□□□ 0.08
PACS1-214ENST00000533811 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
PACS1-214ENST00000533811 SCAPERQ9BY12 1400 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms