RNA–Protein interactions for RNA: ENST00000533444.1

CYC1-204, Transcript of cytochrome c1, humanhuman

TSL 1 (best)

Gene CYC1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYC1-204ENST00000533444 IFT140Q96RY7 1462 aa40.71■■■■■ 4.11
CYC1-204ENST00000533444 ERCC6Q03468 1493 aa40.64■■■■■ 4.1
CYC1-204ENST00000533444 TIAM1Q13009 1591 aa40.6■■■■■ 4.09
CYC1-204ENST00000533444 ADAMTS12P58397 1594 aa40.58■■■■■ 4.09
CYC1-204ENST00000533444 GRIN2BQ13224 1484 aa40.58■■■■■ 4.09
CYC1-204ENST00000533444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.58■■■■■ 4.09
CYC1-204ENST00000533444 CCER1Q8TC90 406 aaPredicted RBP40.58■■■■■ 4.09
CYC1-204ENST00000533444 KANK4Q5T7N3 995 aaPredicted RBP40.56■■■■■ 4.08
CYC1-204ENST00000533444 THOC2Q8NI27 1593 aaKnown RBP40.55■■■■■ 4.08
CYC1-204ENST00000533444 AQRO60306 1485 aaKnown RBP eCLIP40.54■■■■■ 4.083e-8■■■■□ 21.3
CYC1-204ENST00000533444 PCF11O94913 1555 aaKnown RBP40.54■■■■■ 4.08
CYC1-204ENST00000533444 SAMD9Q5K651 1589 aa40.52■■■■■ 4.08
CYC1-204ENST00000533444 FHOD3Q2V2M9 1422 aa40.51■■■■■ 4.07
CYC1-204ENST00000533444 CFAP43Q8NDM7 1665 aa40.5■■■■■ 4.07
CYC1-204ENST00000533444 FYCO1Q9BQS8 1478 aa40.49■■■■■ 4.07
CYC1-204ENST00000533444 RRBP1Q9P2E9 1410 aaKnown RBP40.44■■■■■ 4.06
CYC1-204ENST00000533444 FMN1Q68DA7 1419 aa40.43■■■■■ 4.06
CYC1-204ENST00000533444 CASKIN1Q8WXD9 1431 aa40.42■■■■■ 4.06
CYC1-204ENST00000533444 ZNF608Q9ULD9 1512 aaPredicted RBP40.41■■■■■ 4.06
CYC1-204ENST00000533444 P3H3Q8IVL6 736 aa40.39■■■■■ 4.06
CYC1-204ENST00000533444 LRRC9Q6ZRR7 1453 aa40.38■■■■■ 4.05
CYC1-204ENST00000533444 HNRNPUL2Q1KMD3 747 aaKnown RBP40.37■■■■■ 4.05
CYC1-204ENST00000533444 EIF4G3O43432 1585 aaKnown RBP40.36■■■■■ 4.05
CYC1-204ENST00000533444 IQGAP2Q13576 1575 aa40.31■■■■■ 4.04
CYC1-204ENST00000533444 SNAPC4Q5SXM2 1469 aa40.27■■■■■ 4.04
CYC1-204ENST00000533444 CCNB3Q8WWL7 1395 aa40.24■■■■■ 4.03
CYC1-204ENST00000533444 MAGI1Q96QZ7 1491 aaPredicted RBP40.16■■■■■ 4.02
CYC1-204ENST00000533444 UGGT2Q9NYU1 1516 aa40.11■■■■■ 4.01
CYC1-204ENST00000533444 ATP1B4Q9UN42 357 aaPredicted RBP40.1■■■■■ 4.01
CYC1-204ENST00000533444 GRIN2AQ12879 1464 aa40.1■■■■■ 4.01
CYC1-204ENST00000533444 KIAA0586Q9BVV6 1533 aa40.06■■■■■ 4
CYC1-204ENST00000533444 PHLDB1Q86UU1 1377 aa40.02■■■■■ 4
CYC1-204ENST00000533444 SYNJ2O15056 1496 aa39.99■■■■□ 3.99
CYC1-204ENST00000533444 LRRIQ1Q96JM4 1722 aa39.99■■■■□ 3.99
CYC1-204ENST00000533444 HECW1Q76N89 1606 aa39.96■■■■□ 3.99
CYC1-204ENST00000533444 CCDC18Q5T9S5 1454 aa39.95■■■■□ 3.99
CYC1-204ENST00000533444 KIAA0556O60303 1618 aa39.88■■■■□ 3.98
CYC1-204ENST00000533444 EHBP1L1Q8N3D4 1523 aa39.88■■■■□ 3.98
CYC1-204ENST00000533444 MTUS2Q5JR59 1369 aa39.88■■■■□ 3.97
CYC1-204ENST00000533444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.85■■■■□ 3.972e-10■□□□□ 10.9
CYC1-204ENST00000533444 CLSPNQ9HAW4 1339 aa39.82■■■■□ 3.96
CYC1-204ENST00000533444 CEP170Q5SW79 1584 aa39.82■■■■□ 3.96
CYC1-204ENST00000533444 DISP1Q96F81 1524 aa39.81■■■■□ 3.96
CYC1-204ENST00000533444 CHMP7Q8WUX9 453 aaPredicted RBP39.81■■■■□ 3.96
CYC1-204ENST00000533444 SUPT6HQ7KZ85 1726 aaKnown RBP39.8■■■■□ 3.96
CYC1-204ENST00000533444 NUP160Q12769 1436 aa39.76■■■■□ 3.95
CYC1-204ENST00000533444 DHX57Q6P158 1386 aaKnown RBP39.74■■■■□ 3.95
CYC1-204ENST00000533444 EPRSP07814 1512 aaKnown RBP39.72■■■■□ 3.95
CYC1-204ENST00000533444 FGD6Q6ZV73 1430 aa39.72■■■■□ 3.95
CYC1-204ENST00000533444 NCOA2Q15596 1464 aa39.71■■■■□ 3.95
CYC1-204ENST00000533444 ITGAEP38570 1179 aa39.68■■■■□ 3.94
CYC1-204ENST00000533444 FAM50AQ14320 339 aaKnown RBP39.68■■■■□ 3.94
CYC1-204ENST00000533444 ARHGEF11O15085 1522 aa39.65■■■■□ 3.94
CYC1-204ENST00000533444 MAGI3Q5TCQ9 1506 aa39.64■■■■□ 3.94
CYC1-204ENST00000533444 MYOM3Q5VTT5 1437 aa39.64■■■■□ 3.94
CYC1-204ENST00000533444 SETD5Q9C0A6 1442 aa39.6■■■■□ 3.93
CYC1-204ENST00000533444 RAPGEF6Q8TEU7 1601 aa39.59■■■■□ 3.93
CYC1-204ENST00000533444 RAB3GAP2Q9H2M9 1393 aa39.58■■■■□ 3.93
CYC1-204ENST00000533444 FBLN2P98095 1184 aa39.58■■■■□ 3.93
CYC1-204ENST00000533444 CDK13Q14004 1512 aaKnown RBP39.56■■■■□ 3.92
CYC1-204ENST00000533444 CARMIL2Q6F5E8 1435 aa39.55■■■■□ 3.92
CYC1-204ENST00000533444 NUP153P49790 1475 aaKnown RBP39.49■■■■□ 3.91
CYC1-204ENST00000533444 PTPN23Q9H3S7 1636 aa39.46■■■■□ 3.91
CYC1-204ENST00000533444 JPH4Q96JJ6 628 aa39.43■■■■□ 3.9
CYC1-204ENST00000533444 TCOF1Q13428 1488 aaKnown RBP39.4■■■■□ 3.9
CYC1-204ENST00000533444 MIA2Q96PC5 1412 aa39.36■■■■□ 3.89
CYC1-204ENST00000533444 CHD1O14646 1710 aa39.33■■■■□ 3.89
CYC1-204ENST00000533444 CDK11AQ9UQ88 783 aaPredicted RBP39.3■■■■□ 3.88
CYC1-204ENST00000533444 MAPKBP1O60336 1514 aa39.28■■■■□ 3.88
CYC1-204ENST00000533444 HFM1A2PYH4 1435 aa39.28■■■■□ 3.88
CYC1-204ENST00000533444 PLB1Q6P1J6 1458 aa39.28■■■■□ 3.88
CYC1-204ENST00000533444 ZNF316A6NFI3 1004 aaPredicted RBP39.26■■■■□ 3.88
CYC1-204ENST00000533444 PTPRKQ15262 1439 aa39.24■■■■□ 3.87
CYC1-204ENST00000533444 ABCA8O94911 1581 aa39.23■■■■□ 3.87
CYC1-204ENST00000533444 ARID3CA6NKF2 412 aa39.23■■■■□ 3.87
CYC1-204ENST00000533444 TROQ12816 1431 aaPredicted RBP39.2■■■■□ 3.87
CYC1-204ENST00000533444 ADCY10Q96PN6 1610 aa39.17■■■■□ 3.86
CYC1-204ENST00000533444 PRG4Q92954 1404 aaPredicted RBP39.14■■■■□ 3.86
CYC1-204ENST00000533444 AKNAQ7Z591 1439 aa39.14■■■■□ 3.86
CYC1-204ENST00000533444 SHROOM2Q13796 1616 aa39.13■■■■□ 3.86
CYC1-204ENST00000533444 NAIPQ13075 1403 aa39.12■■■■□ 3.85
CYC1-204ENST00000533444 DIEXFQ68CQ4 756 aaKnown RBP39.1■■■■□ 3.85
CYC1-204ENST00000533444 GCC2Q8IWJ2 1684 aa39.1■■■■□ 3.85
CYC1-204ENST00000533444 ITSN2Q9NZM3 1697 aa39.08■■■■□ 3.85
CYC1-204ENST00000533444 UACAQ9BZF9 1416 aa39.03■■■■□ 3.84
CYC1-204ENST00000533444 PTPRGP23470 1445 aa39■■■■□ 3.83
CYC1-204ENST00000533444 DNMT1P26358 1616 aaKnown RBP38.99■■■■□ 3.83
CYC1-204ENST00000533444 KIF14Q15058 1648 aa38.97■■■■□ 3.83
CYC1-204ENST00000533444 ATP10BO94823 1461 aa38.96■■■■□ 3.83
CYC1-204ENST00000533444 DAPK1P53355 1430 aa38.93■■■■□ 3.82
CYC1-204ENST00000533444 GPATCH8Q9UKJ3 1502 aaKnown RBP38.9■■■■□ 3.82
CYC1-204ENST00000533444 ROCK1Q13464 1354 aa38.9■■■■□ 3.82
CYC1-204ENST00000533444 TIMELESSQ9UNS1 1208 aa38.89■■■■□ 3.82
CYC1-204ENST00000533444 PLEKHD1A6NEE1 506 aa38.87■■■■□ 3.81
CYC1-204ENST00000533444 CLASP1Q7Z460 1538 aa38.87■■■■□ 3.81
CYC1-204ENST00000533444 CAMSAP2Q08AD1 1489 aa38.85■■■■□ 3.81
CYC1-204ENST00000533444 ABCC5O15440 1437 aa38.84■■■■□ 3.81
CYC1-204ENST00000533444 ACIN1Q9UKV3 1341 aaKnown RBP38.83■■■■□ 3.81
CYC1-204ENST00000533444 CHIC2Q9UKJ5 165 aa38.81■■■■□ 3.8
CYC1-204ENST00000533444 RRP7BPQ9NSQ0 103 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms