RNA–Protein interactions for RNA: ENST00000533409.1

MS4A6A-218, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3

Gene MS4A6A, Length 682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-218ENST00000533409 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
MS4A6A-218ENST00000533409 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
MS4A6A-218ENST00000533409 NPM2Q86SE8 214 aaKnown RBP6.72□□□□□ -1.33
MS4A6A-218ENST00000533409 PROM2Q8N271 834 aa6.72□□□□□ -1.33
MS4A6A-218ENST00000533409 SUPT5HO00267 1087 aaKnown RBP6.71□□□□□ -1.34
MS4A6A-218ENST00000533409 SPRYD3Q8NCJ5 442 aa6.7□□□□□ -1.34
MS4A6A-218ENST00000533409 AKT1S1Q96B36 256 aa6.7□□□□□ -1.34
MS4A6A-218ENST00000533409 TRIM26Q12899 539 aaPredicted RBP6.69□□□□□ -1.34
MS4A6A-218ENST00000533409 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
MS4A6A-218ENST00000533409 ATF5Q9Y2D1 282 aaPredicted RBP6.68□□□□□ -1.34
MS4A6A-218ENST00000533409 HAX1O00165 279 aa6.67□□□□□ -1.34
MS4A6A-218ENST00000533409 UBTFP17480 764 aaKnown RBP6.67□□□□□ -1.34
MS4A6A-218ENST00000533409 PIP4P2Q8N4L2 257 aa6.64□□□□□ -1.35
MS4A6A-218ENST00000533409 HRCP23327 699 aa6.63□□□□□ -1.35
MS4A6A-218ENST00000533409 SMARCA2P51531 1590 aa6.62□□□□□ -1.35
MS4A6A-218ENST00000533409 ECM2O94769 699 aaPredicted RBP6.61□□□□□ -1.35
MS4A6A-218ENST00000533409 EIF4G1Q04637 1599 aaKnown RBP6.61□□□□□ -1.35
MS4A6A-218ENST00000533409 RSF1Q96T23 1441 aaPredicted RBP6.6□□□□□ -1.35
MS4A6A-218ENST00000533409 SMARCA4P51532 1647 aa6.59□□□□□ -1.35
MS4A6A-218ENST00000533409 SPDYE4A6NLX3 237 aa6.59□□□□□ -1.35
MS4A6A-218ENST00000533409 RGL2O15211 777 aa6.59□□□□□ -1.35
MS4A6A-218ENST00000533409 CECR2Q9BXF3 1484 aa6.59□□□□□ -1.36
MS4A6A-218ENST00000533409 POLA2Q14181 598 aa6.58□□□□□ -1.36
MS4A6A-218ENST00000533409 NCAPD3P42695 1498 aa6.58□□□□□ -1.36
MS4A6A-218ENST00000533409 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
MS4A6A-218ENST00000533409 PEG3Q9GZU2 1588 aa6.57□□□□□ -1.36
MS4A6A-218ENST00000533409 FXR2P51116 673 aaKnown RBP eCLIP6.56□□□□□ -1.36
MS4A6A-218ENST00000533409 BRPF1P55201 1214 aaPredicted RBP6.56□□□□□ -1.36
MS4A6A-218ENST00000533409 PELP1Q8IZL8 1130 aaKnown RBP6.56□□□□□ -1.36
MS4A6A-218ENST00000533409 ZBTB12Q9Y330 459 aaPredicted RBP6.56□□□□□ -1.36
MS4A6A-218ENST00000533409 MROH2BQ7Z745 1585 aa6.56□□□□□ -1.36
MS4A6A-218ENST00000533409 ATAD2BQ9ULI0 1458 aa6.55□□□□□ -1.36
MS4A6A-218ENST00000533409 BAZ1BQ9UIG0 1483 aaKnown RBP6.54□□□□□ -1.36
MS4A6A-218ENST00000533409 LHX8Q68G74 356 aa6.54□□□□□ -1.36
MS4A6A-218ENST00000533409 TTBK1Q5TCY1 1321 aaPredicted RBP6.53□□□□□ -1.36
MS4A6A-218ENST00000533409 HMGXB3Q12766 1538 aa6.53□□□□□ -1.36
MS4A6A-218ENST00000533409 CC2D2AQ9P2K1 1620 aa6.52□□□□□ -1.37
MS4A6A-218ENST00000533409 SPOCK2Q92563 424 aa6.5□□□□□ -1.37
MS4A6A-218ENST00000533409 TOP2AP11388 1531 aaKnown RBP6.49□□□□□ -1.37
MS4A6A-218ENST00000533409 CHGAP10645 457 aaKnown RBP6.48□□□□□ -1.37
MS4A6A-218ENST00000533409 WIZO95785 1651 aa6.47□□□□□ -1.37
MS4A6A-218ENST00000533409 PITPNM1O00562 1244 aa6.47□□□□□ -1.37
MS4A6A-218ENST00000533409 MYT1Q01538 1121 aa6.46□□□□□ -1.38
MS4A6A-218ENST00000533409 EVX2Q03828 476 aa6.45□□□□□ -1.38
MS4A6A-218ENST00000533409 MKRN4PQ13434 485 aaPredicted RBP6.44□□□□□ -1.38
MS4A6A-218ENST00000533409 HS6ST3Q8IZP7 471 aa6.44□□□□□ -1.38
MS4A6A-218ENST00000533409 LMOD2Q6P5Q4 547 aa6.42□□□□□ -1.38
MS4A6A-218ENST00000533409 CCDC9Q9Y3X0 531 aaKnown RBP6.41□□□□□ -1.38
MS4A6A-218ENST00000533409 CADPSQ9ULU8 1353 aa6.41□□□□□ -1.38
MS4A6A-218ENST00000533409 CCDC88BA6NC98 1476 aa6.41□□□□□ -1.38
MS4A6A-218ENST00000533409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.4□□□□□ -1.38
MS4A6A-218ENST00000533409 PDS5BQ9NTI5 1447 aa6.4□□□□□ -1.39
MS4A6A-218ENST00000533409 LOC105371045A0A1W2PR82 267 aa6.39□□□□□ -1.39
MS4A6A-218ENST00000533409 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
MS4A6A-218ENST00000533409 RSPH6AQ9H0K4 717 aa6.39□□□□□ -1.39
MS4A6A-218ENST00000533409 C1orf115Q9H7X2 142 aa6.39□□□□□ -1.39
MS4A6A-218ENST00000533409 C19orf67A6NJJ6 358 aa6.38□□□□□ -1.39
MS4A6A-218ENST00000533409 NEUROD2Q15784 382 aa6.38□□□□□ -1.39
MS4A6A-218ENST00000533409 LAMC3Q9Y6N6 1575 aa6.37□□□□□ -1.39
MS4A6A-218ENST00000533409 CFTRP13569 1480 aa6.37□□□□□ -1.39
MS4A6A-218ENST00000533409 GABBR2O75899 941 aa6.37□□□□□ -1.39
MS4A6A-218ENST00000533409 NKX1-1Q15270 411 aaPredicted RBP6.37□□□□□ -1.39
MS4A6A-218ENST00000533409 GTPBP6O43824 516 aaPredicted RBP6.35□□□□□ -1.39
MS4A6A-218ENST00000533409 OSCARQ8IYS5 282 aa6.35□□□□□ -1.39
MS4A6A-218ENST00000533409 ABCC8Q09428 1581 aa6.35□□□□□ -1.39
MS4A6A-218ENST00000533409 P3H3Q8IVL6 736 aa6.34□□□□□ -1.39
MS4A6A-218ENST00000533409 NECTIN2Q92692 538 aa6.34□□□□□ -1.39
MS4A6A-218ENST00000533409 ZBTB7CA1YPR0 619 aa6.32□□□□□ -1.4
MS4A6A-218ENST00000533409 CLCN6P51797 869 aa6.32□□□□□ -1.4
MS4A6A-218ENST00000533409 PRKAR2AP13861 404 aaKnown RBP6.31□□□□□ -1.4
MS4A6A-218ENST00000533409 TRIM41Q8WV44 630 aa6.31□□□□□ -1.4
MS4A6A-218ENST00000533409 ARID3AQ99856 593 aa6.31□□□□□ -1.4
MS4A6A-218ENST00000533409 ERCC6Q03468 1493 aa6.3□□□□□ -1.4
MS4A6A-218ENST00000533409 ZC3H15Q8WU90 426 aaKnown RBP6.3□□□□□ -1.4
MS4A6A-218ENST00000533409 FANCD2Q9BXW9 1451 aa6.29□□□□□ -1.4
MS4A6A-218ENST00000533409 CEP164Q9UPV0 1460 aa6.29□□□□□ -1.4
MS4A6A-218ENST00000533409 KCNV2Q8TDN2 545 aa6.29□□□□□ -1.4
MS4A6A-218ENST00000533409 RNF25Q96BH1 459 aaPredicted RBP6.29□□□□□ -1.4
MS4A6A-218ENST00000533409 SLC24A3Q9HC58 644 aa6.29□□□□□ -1.4
MS4A6A-218ENST00000533409 IGSF3O75054 1194 aa6.28□□□□□ -1.4
MS4A6A-218ENST00000533409 PDIA4P13667 645 aaKnown RBP6.28□□□□□ -1.4
MS4A6A-218ENST00000533409 EIF5BO60841 1220 aaKnown RBP6.27□□□□□ -1.41
MS4A6A-218ENST00000533409 SPDYE1Q8NFV5 336 aaPredicted RBP6.27□□□□□ -1.41
MS4A6A-218ENST00000533409 WRNQ14191 1432 aaPredicted RBP eCLIP6.26□□□□□ -1.41
MS4A6A-218ENST00000533409 PRDM2Q13029 1718 aa6.26□□□□□ -1.41
MS4A6A-218ENST00000533409 SPDYE2BA6NHP3 402 aa6.26□□□□□ -1.41
MS4A6A-218ENST00000533409 SPDYE6P0CI01 402 aa6.26□□□□□ -1.41
MS4A6A-218ENST00000533409 SPDYE2Q495Y8 402 aa6.26□□□□□ -1.41
MS4A6A-218ENST00000533409 PCDH10Q9P2E7 1040 aa6.25□□□□□ -1.41
MS4A6A-218ENST00000533409 MRC2Q9UBG0 1479 aa6.23□□□□□ -1.41
MS4A6A-218ENST00000533409 CIZ1Q9ULV3 898 aaPredicted RBP6.23□□□□□ -1.41
MS4A6A-218ENST00000533409 NESP48681 1621 aa6.23□□□□□ -1.41
MS4A6A-218ENST00000533409 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
MS4A6A-218ENST00000533409 POTEMA6NI47 508 aa6.21□□□□□ -1.42
MS4A6A-218ENST00000533409 EEA1Q15075 1411 aa6.21□□□□□ -1.42
MS4A6A-218ENST00000533409 DNMBPQ6XZF7 1577 aa6.2□□□□□ -1.42
MS4A6A-218ENST00000533409 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
MS4A6A-218ENST00000533409 PLCD3Q8N3E9 789 aa6.19□□□□□ -1.42
MS4A6A-218ENST00000533409 KCTD17Q8N5Z5 321 aa6.19□□□□□ -1.42
MS4A6A-218ENST00000533409 STAG3Q9UJ98 1225 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms