RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
ATG13-220ENST00000533316 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
ATG13-220ENST00000533316 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG13-220ENST00000533316 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.5
ATG13-220ENST00000533316 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
ATG13-220ENST00000533316 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
ATG13-220ENST00000533316 DIP2BQ9P265 1576 aa18.1■□□□□ 0.49
ATG13-220ENST00000533316 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.48
ATG13-220ENST00000533316 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
ATG13-220ENST00000533316 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
ATG13-220ENST00000533316 IGF1RP08069 1367 aa18.05■□□□□ 0.48
ATG13-220ENST00000533316 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
ATG13-220ENST00000533316 KDM6BO15054 1643 aa18.01■□□□□ 0.47
ATG13-220ENST00000533316 PTPRGP23470 1445 aa17.97■□□□□ 0.47
ATG13-220ENST00000533316 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
ATG13-220ENST00000533316 CUL7Q14999 1698 aa17.92■□□□□ 0.46
ATG13-220ENST00000533316 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
ATG13-220ENST00000533316 ASXL2Q76L83 1435 aa17.89■□□□□ 0.45
ATG13-220ENST00000533316 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
ATG13-220ENST00000533316 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
ATG13-220ENST00000533316 PPRC1Q5VV67 1664 aaKnown RBP17.86■□□□□ 0.45
ATG13-220ENST00000533316 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
ATG13-220ENST00000533316 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
ATG13-220ENST00000533316 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
ATG13-220ENST00000533316 IQGAP2Q13576 1575 aa17.81■□□□□ 0.44
ATG13-220ENST00000533316 PLB1Q6P1J6 1458 aa17.81■□□□□ 0.44
ATG13-220ENST00000533316 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
ATG13-220ENST00000533316 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
ATG13-220ENST00000533316 UACAQ9BZF9 1416 aa17.8■□□□□ 0.44
ATG13-220ENST00000533316 GLI2P10070 1586 aa17.79■□□□□ 0.44
ATG13-220ENST00000533316 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.44
ATG13-220ENST00000533316 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
ATG13-220ENST00000533316 ZCCHC11Q5TAX3 1644 aaKnown RBP17.72■□□□□ 0.43
ATG13-220ENST00000533316 KDM5BQ9UGL1 1544 aa17.72■□□□□ 0.43
ATG13-220ENST00000533316 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
ATG13-220ENST00000533316 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
ATG13-220ENST00000533316 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
ATG13-220ENST00000533316 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
ATG13-220ENST00000533316 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
ATG13-220ENST00000533316 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
ATG13-220ENST00000533316 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.41
ATG13-220ENST00000533316 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
ATG13-220ENST00000533316 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
ATG13-220ENST00000533316 CD109Q6YHK3 1445 aa17.58■□□□□ 0.41
ATG13-220ENST00000533316 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
ATG13-220ENST00000533316 ABCA8O94911 1581 aa17.53■□□□□ 0.4
ATG13-220ENST00000533316 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.4
ATG13-220ENST00000533316 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.39
ATG13-220ENST00000533316 KIF21BO75037 1637 aa17.5■□□□□ 0.39
ATG13-220ENST00000533316 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
ATG13-220ENST00000533316 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
ATG13-220ENST00000533316 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
ATG13-220ENST00000533316 ATP10BO94823 1461 aa17.43■□□□□ 0.38
ATG13-220ENST00000533316 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
ATG13-220ENST00000533316 ARAP3Q8WWN8 1544 aa17.39■□□□□ 0.37
ATG13-220ENST00000533316 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
ATG13-220ENST00000533316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
ATG13-220ENST00000533316 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
ATG13-220ENST00000533316 PTPRMP28827 1452 aa17.35■□□□□ 0.37
ATG13-220ENST00000533316 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
ATG13-220ENST00000533316 FBXO41Q8TF61 875 aa17.33■□□□□ 0.36
ATG13-220ENST00000533316 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
ATG13-220ENST00000533316 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
ATG13-220ENST00000533316 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
ATG13-220ENST00000533316 FAM9AQ8IZU1 332 aaPredicted RBP17.3■□□□□ 0.36
ATG13-220ENST00000533316 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
ATG13-220ENST00000533316 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
ATG13-220ENST00000533316 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
ATG13-220ENST00000533316 SAMD9Q5K651 1589 aa17.27■□□□□ 0.35
ATG13-220ENST00000533316 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
ATG13-220ENST00000533316 BCORL1Q5H9F3 1711 aa17.26■□□□□ 0.35
ATG13-220ENST00000533316 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
ATG13-220ENST00000533316 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
ATG13-220ENST00000533316 NEO1Q92859 1461 aa17.25■□□□□ 0.35
ATG13-220ENST00000533316 FHOD3Q2V2M9 1422 aa17.25■□□□□ 0.35
ATG13-220ENST00000533316 HSPA2P54652 639 aa17.24■□□□□ 0.35
ATG13-220ENST00000533316 LMTK3Q96Q04 1460 aa17.22■□□□□ 0.35
ATG13-220ENST00000533316 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.35
ATG13-220ENST00000533316 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
ATG13-220ENST00000533316 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
ATG13-220ENST00000533316 MLECQ14165 292 aa17.19■□□□□ 0.34
ATG13-220ENST00000533316 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
ATG13-220ENST00000533316 AKNAQ7Z591 1439 aa17.18■□□□□ 0.34
ATG13-220ENST00000533316 SIGLEC1Q9BZZ2 1709 aa17.17■□□□□ 0.34
ATG13-220ENST00000533316 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
ATG13-220ENST00000533316 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
ATG13-220ENST00000533316 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
ATG13-220ENST00000533316 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
ATG13-220ENST00000533316 FANCAO15360 1455 aa17.15■□□□□ 0.34
ATG13-220ENST00000533316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATG13-220ENST00000533316 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
ATG13-220ENST00000533316 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
ATG13-220ENST00000533316 ZFYVE16Q7Z3T8 1539 aa17.09■□□□□ 0.33
ATG13-220ENST00000533316 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.32
ATG13-220ENST00000533316 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
ATG13-220ENST00000533316 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
ATG13-220ENST00000533316 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
ATG13-220ENST00000533316 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
ATG13-220ENST00000533316 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
ATG13-220ENST00000533316 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms