RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
CAPN1-223ENST00000533079 DIP2BQ9P265 1576 aa22.44■■□□□ 1.18
CAPN1-223ENST00000533079 JPH4Q96JJ6 628 aa22.41■■□□□ 1.18
CAPN1-223ENST00000533079 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
CAPN1-223ENST00000533079 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
CAPN1-223ENST00000533079 KDM6BO15054 1643 aa22.35■■□□□ 1.17
CAPN1-223ENST00000533079 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
CAPN1-223ENST00000533079 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
CAPN1-223ENST00000533079 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
CAPN1-223ENST00000533079 CUL7Q14999 1698 aa22.3■■□□□ 1.16
CAPN1-223ENST00000533079 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
CAPN1-223ENST00000533079 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
CAPN1-223ENST00000533079 KDM4FA0A1W2PPD8 638 aa22.14■■□□□ 1.13
CAPN1-223ENST00000533079 IGF1RP08069 1367 aa22.13■■□□□ 1.13
CAPN1-223ENST00000533079 ABCC2Q92887 1545 aa22.13■■□□□ 1.13
CAPN1-223ENST00000533079 GLI2P10070 1586 aa22.12■■□□□ 1.13
CAPN1-223ENST00000533079 PTPRGP23470 1445 aa22.11■■□□□ 1.13
CAPN1-223ENST00000533079 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
CAPN1-223ENST00000533079 PLB1Q6P1J6 1458 aa22.09■■□□□ 1.13
CAPN1-223ENST00000533079 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
CAPN1-223ENST00000533079 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
CAPN1-223ENST00000533079 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
CAPN1-223ENST00000533079 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
CAPN1-223ENST00000533079 ASXL2Q76L83 1435 aa22.04■■□□□ 1.12
CAPN1-223ENST00000533079 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
CAPN1-223ENST00000533079 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
CAPN1-223ENST00000533079 MAP3K4Q9Y6R4 1608 aa21.98■■□□□ 1.11
CAPN1-223ENST00000533079 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
CAPN1-223ENST00000533079 TEX14Q8IWB6 1497 aa21.96■■□□□ 1.11
CAPN1-223ENST00000533079 KDM5BQ9UGL1 1544 aa21.95■■□□□ 1.1
CAPN1-223ENST00000533079 EPRSP07814 1512 aaKnown RBP21.93■■□□□ 1.1
CAPN1-223ENST00000533079 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
CAPN1-223ENST00000533079 ZCCHC11Q5TAX3 1644 aaKnown RBP21.9■■□□□ 1.1
CAPN1-223ENST00000533079 UGGT2Q9NYU1 1516 aa21.9■■□□□ 1.1
CAPN1-223ENST00000533079 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-223ENST00000533079 ILDR1Q86SU0 546 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-223ENST00000533079 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
CAPN1-223ENST00000533079 COL17A1Q9UMD9 1497 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-223ENST00000533079 HECW2Q9P2P5 1572 aa21.84■■□□□ 1.09
CAPN1-223ENST00000533079 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
CAPN1-223ENST00000533079 RAPGEF2Q9Y4G8 1499 aa21.81■■□□□ 1.08
CAPN1-223ENST00000533079 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
CAPN1-223ENST00000533079 MAGI3Q5TCQ9 1506 aa21.74■■□□□ 1.07
CAPN1-223ENST00000533079 CTTNBP2Q8WZ74 1663 aa21.73■■□□□ 1.07
CAPN1-223ENST00000533079 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
CAPN1-223ENST00000533079 ABCA8O94911 1581 aa21.67■■□□□ 1.06
CAPN1-223ENST00000533079 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
CAPN1-223ENST00000533079 KIF21BO75037 1637 aa21.59■■□□□ 1.05
CAPN1-223ENST00000533079 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.04
CAPN1-223ENST00000533079 PHLDB1Q86UU1 1377 aa21.51■■□□□ 1.03
CAPN1-223ENST00000533079 ABCA9Q8IUA7 1624 aa21.5■■□□□ 1.03
CAPN1-223ENST00000533079 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
CAPN1-223ENST00000533079 KCNH8Q96L42 1107 aa21.48■■□□□ 1.03
CAPN1-223ENST00000533079 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
CAPN1-223ENST00000533079 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
CAPN1-223ENST00000533079 PTPRMP28827 1452 aa21.44■■□□□ 1.02
CAPN1-223ENST00000533079 FBXO41Q8TF61 875 aa21.43■■□□□ 1.02
CAPN1-223ENST00000533079 NEO1Q92859 1461 aa21.43■■□□□ 1.02
CAPN1-223ENST00000533079 ATP10BO94823 1461 aa21.41■■□□□ 1.02
CAPN1-223ENST00000533079 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.01
CAPN1-223ENST00000533079 SAMD9Q5K651 1589 aa21.38■■□□□ 1.01
CAPN1-223ENST00000533079 FRMPD1Q5SYB0 1578 aa21.37■■□□□ 1.01
CAPN1-223ENST00000533079 RAPGEF6Q8TEU7 1601 aa21.37■■□□□ 1.01
CAPN1-223ENST00000533079 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
CAPN1-223ENST00000533079 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
CAPN1-223ENST00000533079 MADDQ8WXG6 1647 aa21.33■■□□□ 1.01
CAPN1-223ENST00000533079 CFAP74Q9C0B2 1584 aa21.31■■□□□ 1
CAPN1-223ENST00000533079 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
CAPN1-223ENST00000533079 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
CAPN1-223ENST00000533079 RICTORQ6R327 1708 aa21.26■□□□□ 0.99
CAPN1-223ENST00000533079 ARID3CA6NKF2 412 aa21.25■□□□□ 0.99
CAPN1-223ENST00000533079 NUP153P49790 1475 aaKnown RBP21.25■□□□□ 0.99
CAPN1-223ENST00000533079 RIMS1Q86UR5 1692 aaKnown RBP21.24■□□□□ 0.99
CAPN1-223ENST00000533079 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
CAPN1-223ENST00000533079 DENND4BO75064 1496 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-223ENST00000533079 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
CAPN1-223ENST00000533079 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-223ENST00000533079 FHOD3Q2V2M9 1422 aa21.21■□□□□ 0.99
CAPN1-223ENST00000533079 FANCAO15360 1455 aa21.2■□□□□ 0.98
CAPN1-223ENST00000533079 POGZQ7Z3K3 1410 aa21.19■□□□□ 0.98
CAPN1-223ENST00000533079 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
CAPN1-223ENST00000533079 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
CAPN1-223ENST00000533079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.16■□□□□ 0.98
CAPN1-223ENST00000533079 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
CAPN1-223ENST00000533079 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
CAPN1-223ENST00000533079 MAGI2Q86UL8 1455 aa21.15■□□□□ 0.98
CAPN1-223ENST00000533079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.14■□□□□ 0.98
CAPN1-223ENST00000533079 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
CAPN1-223ENST00000533079 EEA1Q15075 1411 aa21.1■□□□□ 0.97
CAPN1-223ENST00000533079 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
CAPN1-223ENST00000533079 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
CAPN1-223ENST00000533079 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
CAPN1-223ENST00000533079 SIGLEC1Q9BZZ2 1709 aa21.08■□□□□ 0.97
CAPN1-223ENST00000533079 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
CAPN1-223ENST00000533079 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
CAPN1-223ENST00000533079 PREX1Q8TCU6 1659 aa21.03■□□□□ 0.96
CAPN1-223ENST00000533079 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
CAPN1-223ENST00000533079 HSPA2P54652 639 aa21■□□□□ 0.95
CAPN1-223ENST00000533079 PLCH2O75038 1416 aa20.99■□□□□ 0.95
CAPN1-223ENST00000533079 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms