RNA–Protein interactions for RNA: ENST00000531171.5

RB1-206, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 4

Gene RB1, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-206ENST00000531171 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
RB1-206ENST00000531171 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
RB1-206ENST00000531171 NUBP1P53384 320 aa12.15□□□□□ -0.46
RB1-206ENST00000531171 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
RB1-206ENST00000531171 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
RB1-206ENST00000531171 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
RB1-206ENST00000531171 BAZ1AQ9NRL2 1556 aaPredicted RBP12.11□□□□□ -0.47
RB1-206ENST00000531171 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
RB1-206ENST00000531171 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
RB1-206ENST00000531171 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
RB1-206ENST00000531171 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
RB1-206ENST00000531171 WIZO95785 1651 aa12.05□□□□□ -0.48
RB1-206ENST00000531171 PKD2Q13563 968 aa12□□□□□ -0.49
RB1-206ENST00000531171 FAM212AQ96EL1 285 aa12□□□□□ -0.49
RB1-206ENST00000531171 GSE1Q14687 1217 aa11.99□□□□□ -0.49
RB1-206ENST00000531171 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
RB1-206ENST00000531171 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
RB1-206ENST00000531171 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
RB1-206ENST00000531171 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
RB1-206ENST00000531171 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
RB1-206ENST00000531171 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
RB1-206ENST00000531171 PAK3O75914 559 aaPredicted RBP11.91□□□□□ -0.5
RB1-206ENST00000531171 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
RB1-206ENST00000531171 HAX1O00165 279 aa11.89□□□□□ -0.51
RB1-206ENST00000531171 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
RB1-206ENST00000531171 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
RB1-206ENST00000531171 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
RB1-206ENST00000531171 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
RB1-206ENST00000531171 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
RB1-206ENST00000531171 EVX2Q03828 476 aa11.85□□□□□ -0.51
RB1-206ENST00000531171 PYGBP11216 843 aa11.83□□□□□ -0.52
RB1-206ENST00000531171 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
RB1-206ENST00000531171 SMARCA2P51531 1590 aa11.82□□□□□ -0.52
RB1-206ENST00000531171 PHF12Q96QT6 1004 aa11.8□□□□□ -0.52
RB1-206ENST00000531171 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
RB1-206ENST00000531171 RGL2O15211 777 aa11.79□□□□□ -0.52
RB1-206ENST00000531171 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
RB1-206ENST00000531171 CCDC88BA6NC98 1476 aa11.77□□□□□ -0.52
RB1-206ENST00000531171 ATAD2BQ9ULI0 1458 aa11.77□□□□□ -0.52
RB1-206ENST00000531171 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
RB1-206ENST00000531171 BAZ1BQ9UIG0 1483 aaKnown RBP11.75□□□□□ -0.53
RB1-206ENST00000531171 MAP3K13O43283 966 aa11.74□□□□□ -0.53
RB1-206ENST00000531171 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
RB1-206ENST00000531171 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
RB1-206ENST00000531171 PCDHB13Q9Y5F0 798 aa11.7□□□□□ -0.54
RB1-206ENST00000531171 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
RB1-206ENST00000531171 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
RB1-206ENST00000531171 IFNL1Q8IU54 200 aa11.67□□□□□ -0.54
RB1-206ENST00000531171 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
RB1-206ENST00000531171 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
RB1-206ENST00000531171 CLCN6P51797 869 aa11.66□□□□□ -0.54
RB1-206ENST00000531171 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
RB1-206ENST00000531171 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
RB1-206ENST00000531171 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
RB1-206ENST00000531171 GABBR2O75899 941 aa11.61□□□□□ -0.55
RB1-206ENST00000531171 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
RB1-206ENST00000531171 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
RB1-206ENST00000531171 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
RB1-206ENST00000531171 TRPC6Q9Y210 931 aa11.59□□□□□ -0.55
RB1-206ENST00000531171 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
RB1-206ENST00000531171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
RB1-206ENST00000531171 ZFP91Q96JP5 570 aaPredicted RBP11.57□□□□□ -0.56
RB1-206ENST00000531171 PSEN1P49768 467 aa11.56□□□□□ -0.56
RB1-206ENST00000531171 CC2D2AQ9P2K1 1620 aa11.54□□□□□ -0.56
RB1-206ENST00000531171 HS6ST3Q8IZP7 471 aa11.54□□□□□ -0.56
RB1-206ENST00000531171 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
RB1-206ENST00000531171 TIE1P35590 1138 aa11.52□□□□□ -0.57
RB1-206ENST00000531171 LOC105371045A0A1W2PR82 267 aa11.51□□□□□ -0.57
RB1-206ENST00000531171 STK25O00506 426 aa11.51□□□□□ -0.57
RB1-206ENST00000531171 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
RB1-206ENST00000531171 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
RB1-206ENST00000531171 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
RB1-206ENST00000531171 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
RB1-206ENST00000531171 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
RB1-206ENST00000531171 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
RB1-206ENST00000531171 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
RB1-206ENST00000531171 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
RB1-206ENST00000531171 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
RB1-206ENST00000531171 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
RB1-206ENST00000531171 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
RB1-206ENST00000531171 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
RB1-206ENST00000531171 CFTRP13569 1480 aa11.43□□□□□ -0.58
RB1-206ENST00000531171 EEA1Q15075 1411 aa11.43□□□□□ -0.58
RB1-206ENST00000531171 BBXQ8WY36 941 aaPredicted RBP11.42□□□□□ -0.58
RB1-206ENST00000531171 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
RB1-206ENST00000531171 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
RB1-206ENST00000531171 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
RB1-206ENST00000531171 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
RB1-206ENST00000531171 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
RB1-206ENST00000531171 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
RB1-206ENST00000531171 SOGA1O94964 1423 aa11.38□□□□□ -0.59
RB1-206ENST00000531171 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
RB1-206ENST00000531171 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
RB1-206ENST00000531171 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
RB1-206ENST00000531171 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
RB1-206ENST00000531171 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
RB1-206ENST00000531171 CUX1P39880 1505 aa11.33□□□□□ -0.6
RB1-206ENST00000531171 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
RB1-206ENST00000531171 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
RB1-206ENST00000531171 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms