RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
CHMP4A-205ENST00000531158 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
CHMP4A-205ENST00000531158 ADCY10Q96PN6 1610 aa16.56■□□□□ 0.24
CHMP4A-205ENST00000531158 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
CHMP4A-205ENST00000531158 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
CHMP4A-205ENST00000531158 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
CHMP4A-205ENST00000531158 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
CHMP4A-205ENST00000531158 CUL7Q14999 1698 aa16.5■□□□□ 0.23
CHMP4A-205ENST00000531158 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
CHMP4A-205ENST00000531158 TSPOAP1O95153 1857 aa16.46■□□□□ 0.22
CHMP4A-205ENST00000531158 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
CHMP4A-205ENST00000531158 IGF1RP08069 1367 aa16.43■□□□□ 0.22
CHMP4A-205ENST00000531158 KDM6BO15054 1643 aa16.41■□□□□ 0.22
CHMP4A-205ENST00000531158 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
CHMP4A-205ENST00000531158 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHMP4A-205ENST00000531158 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
CHMP4A-205ENST00000531158 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
CHMP4A-205ENST00000531158 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
CHMP4A-205ENST00000531158 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
CHMP4A-205ENST00000531158 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CHMP4A-205ENST00000531158 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
CHMP4A-205ENST00000531158 DISP1Q96F81 1524 aa16.27■□□□□ 0.2
CHMP4A-205ENST00000531158 GLI2P10070 1586 aa16.26■□□□□ 0.19
CHMP4A-205ENST00000531158 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
CHMP4A-205ENST00000531158 TNIKQ9UKE5 1360 aa16.24■□□□□ 0.19
CHMP4A-205ENST00000531158 UHRF1BP1LA0JNW5 1464 aa16.23■□□□□ 0.19
CHMP4A-205ENST00000531158 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
CHMP4A-205ENST00000531158 ZCCHC11Q5TAX3 1644 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-205ENST00000531158 CARMIL2Q6F5E8 1435 aa16.21■□□□□ 0.19
CHMP4A-205ENST00000531158 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
CHMP4A-205ENST00000531158 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
CHMP4A-205ENST00000531158 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
CHMP4A-205ENST00000531158 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
CHMP4A-205ENST00000531158 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
CHMP4A-205ENST00000531158 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
CHMP4A-205ENST00000531158 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
CHMP4A-205ENST00000531158 SOCS7O14512 581 aa16.07■□□□□ 0.16
CHMP4A-205ENST00000531158 ABCA8O94911 1581 aa16.06■□□□□ 0.16
CHMP4A-205ENST00000531158 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
CHMP4A-205ENST00000531158 WDR7Q9Y4E6 1490 aa16.05■□□□□ 0.16
CHMP4A-205ENST00000531158 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
CHMP4A-205ENST00000531158 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
CHMP4A-205ENST00000531158 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
CHMP4A-205ENST00000531158 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 KIF21BO75037 1637 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
CHMP4A-205ENST00000531158 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
CHMP4A-205ENST00000531158 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
CHMP4A-205ENST00000531158 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
CHMP4A-205ENST00000531158 ATP10BO94823 1461 aa15.87■□□□□ 0.13
CHMP4A-205ENST00000531158 KCNH8Q96L42 1107 aa15.87■□□□□ 0.13
CHMP4A-205ENST00000531158 ARAP3Q8WWN8 1544 aa15.86■□□□□ 0.13
CHMP4A-205ENST00000531158 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
CHMP4A-205ENST00000531158 FRMPD1Q5SYB0 1578 aa15.84■□□□□ 0.13
CHMP4A-205ENST00000531158 ADAMTSL3P82987 1691 aa15.83■□□□□ 0.13
CHMP4A-205ENST00000531158 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
CHMP4A-205ENST00000531158 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
CHMP4A-205ENST00000531158 CERKQ8TCT0 537 aa15.79■□□□□ 0.12
CHMP4A-205ENST00000531158 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
CHMP4A-205ENST00000531158 PTPRMP28827 1452 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
CHMP4A-205ENST00000531158 SIGLEC1Q9BZZ2 1709 aa15.75■□□□□ 0.11
CHMP4A-205ENST00000531158 MADDQ8WXG6 1647 aa15.74■□□□□ 0.11
CHMP4A-205ENST00000531158 NEO1Q92859 1461 aa15.73■□□□□ 0.11
CHMP4A-205ENST00000531158 PCF11O94913 1555 aaKnown RBP15.73■□□□□ 0.11
CHMP4A-205ENST00000531158 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
CHMP4A-205ENST00000531158 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 ARHGEF40Q8TER5 1519 aa15.7■□□□□ 0.1
CHMP4A-205ENST00000531158 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 RIMS1Q86UR5 1692 aaKnown RBP15.69■□□□□ 0.1
CHMP4A-205ENST00000531158 HSPA2P54652 639 aa15.68■□□□□ 0.1
CHMP4A-205ENST00000531158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHMP4A-205ENST00000531158 SPATA31D1Q6ZQQ2 1576 aa15.67■□□□□ 0.1
CHMP4A-205ENST00000531158 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
CHMP4A-205ENST00000531158 ZMYM4Q5VZL5 1548 aa15.63■□□□□ 0.09
CHMP4A-205ENST00000531158 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CHMP4A-205ENST00000531158 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
CHMP4A-205ENST00000531158 EEA1Q15075 1411 aa15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 FANCAO15360 1455 aa15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CHMP4A-205ENST00000531158 AKNAQ7Z591 1439 aa15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-205ENST00000531158 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 FER1L4A9Z1Z3 1794 aa15.59■□□□□ 0.09
CHMP4A-205ENST00000531158 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
CHMP4A-205ENST00000531158 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms