RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
TM9SF1-210ENST00000530563 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
TM9SF1-210ENST00000530563 MAPKBP1O60336 1514 aa19.33■□□□□ 0.68
TM9SF1-210ENST00000530563 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
TM9SF1-210ENST00000530563 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
TM9SF1-210ENST00000530563 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
TM9SF1-210ENST00000530563 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
TM9SF1-210ENST00000530563 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
TM9SF1-210ENST00000530563 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
TM9SF1-210ENST00000530563 IGF1RP08069 1367 aa19.19■□□□□ 0.66
TM9SF1-210ENST00000530563 KDM6BO15054 1643 aa19.18■□□□□ 0.66
TM9SF1-210ENST00000530563 TSPOAP1O95153 1857 aa19.11■□□□□ 0.65
TM9SF1-210ENST00000530563 PTPRGP23470 1445 aa19.08■□□□□ 0.65
TM9SF1-210ENST00000530563 ILDR1Q86SU0 546 aaPredicted RBP19.07■□□□□ 0.64
TM9SF1-210ENST00000530563 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
TM9SF1-210ENST00000530563 ABCC2Q92887 1545 aa19.05■□□□□ 0.64
TM9SF1-210ENST00000530563 CUL7Q14999 1698 aa19.05■□□□□ 0.64
TM9SF1-210ENST00000530563 PPRC1Q5VV67 1664 aaKnown RBP19.03■□□□□ 0.64
TM9SF1-210ENST00000530563 ASXL2Q76L83 1435 aa19.02■□□□□ 0.64
TM9SF1-210ENST00000530563 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
TM9SF1-210ENST00000530563 GLI2P10070 1586 aa19.02■□□□□ 0.63
TM9SF1-210ENST00000530563 COL17A1Q9UMD9 1497 aaPredicted RBP19■□□□□ 0.63
TM9SF1-210ENST00000530563 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
TM9SF1-210ENST00000530563 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
TM9SF1-210ENST00000530563 UHRF1BP1LA0JNW5 1464 aa18.98■□□□□ 0.63
TM9SF1-210ENST00000530563 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
TM9SF1-210ENST00000530563 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
TM9SF1-210ENST00000530563 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
TM9SF1-210ENST00000530563 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
TM9SF1-210ENST00000530563 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
TM9SF1-210ENST00000530563 EPRSP07814 1512 aaKnown RBP18.91■□□□□ 0.62
TM9SF1-210ENST00000530563 KDM5BQ9UGL1 1544 aa18.91■□□□□ 0.62
TM9SF1-210ENST00000530563 IQGAP2Q13576 1575 aa18.91■□□□□ 0.62
TM9SF1-210ENST00000530563 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
TM9SF1-210ENST00000530563 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.6
TM9SF1-210ENST00000530563 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
TM9SF1-210ENST00000530563 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
TM9SF1-210ENST00000530563 ZCCHC11Q5TAX3 1644 aaKnown RBP18.81■□□□□ 0.6
TM9SF1-210ENST00000530563 KIAA0556O60303 1618 aa18.75■□□□□ 0.59
TM9SF1-210ENST00000530563 WDR7Q9Y4E6 1490 aa18.75■□□□□ 0.59
TM9SF1-210ENST00000530563 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
TM9SF1-210ENST00000530563 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
TM9SF1-210ENST00000530563 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
TM9SF1-210ENST00000530563 ABCA8O94911 1581 aa18.65■□□□□ 0.58
TM9SF1-210ENST00000530563 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
TM9SF1-210ENST00000530563 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.57
TM9SF1-210ENST00000530563 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
TM9SF1-210ENST00000530563 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
TM9SF1-210ENST00000530563 KIF21BO75037 1637 aa18.57■□□□□ 0.56
TM9SF1-210ENST00000530563 CTTNBP2Q8WZ74 1663 aa18.56■□□□□ 0.56
TM9SF1-210ENST00000530563 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
TM9SF1-210ENST00000530563 ATP10BO94823 1461 aa18.52■□□□□ 0.55
TM9SF1-210ENST00000530563 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
TM9SF1-210ENST00000530563 ADAMTSL3P82987 1691 aa18.5■□□□□ 0.55
TM9SF1-210ENST00000530563 PTPRMP28827 1452 aa18.5■□□□□ 0.55
TM9SF1-210ENST00000530563 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
TM9SF1-210ENST00000530563 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
TM9SF1-210ENST00000530563 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
TM9SF1-210ENST00000530563 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
TM9SF1-210ENST00000530563 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
TM9SF1-210ENST00000530563 NEO1Q92859 1461 aa18.41■□□□□ 0.54
TM9SF1-210ENST00000530563 FRMPD1Q5SYB0 1578 aa18.4■□□□□ 0.54
TM9SF1-210ENST00000530563 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
TM9SF1-210ENST00000530563 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
TM9SF1-210ENST00000530563 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
TM9SF1-210ENST00000530563 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
TM9SF1-210ENST00000530563 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
TM9SF1-210ENST00000530563 RAPGEF6Q8TEU7 1601 aa18.32■□□□□ 0.52
TM9SF1-210ENST00000530563 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
TM9SF1-210ENST00000530563 NUP153P49790 1475 aaKnown RBP18.32■□□□□ 0.52
TM9SF1-210ENST00000530563 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
TM9SF1-210ENST00000530563 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
TM9SF1-210ENST00000530563 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
TM9SF1-210ENST00000530563 DENND4BO75064 1496 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 AKNAQ7Z591 1439 aa18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 HSPA2P54652 639 aa18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
TM9SF1-210ENST00000530563 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-210ENST00000530563 SIGLEC1Q9BZZ2 1709 aa18.24■□□□□ 0.51
TM9SF1-210ENST00000530563 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
TM9SF1-210ENST00000530563 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
TM9SF1-210ENST00000530563 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
TM9SF1-210ENST00000530563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.21■□□□□ 0.51
TM9SF1-210ENST00000530563 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
TM9SF1-210ENST00000530563 FANCAO15360 1455 aa18.2■□□□□ 0.5
TM9SF1-210ENST00000530563 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
TM9SF1-210ENST00000530563 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
TM9SF1-210ENST00000530563 POGZQ7Z3K3 1410 aa18.16■□□□□ 0.5
TM9SF1-210ENST00000530563 MAGI2Q86UL8 1455 aa18.16■□□□□ 0.5
TM9SF1-210ENST00000530563 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
TM9SF1-210ENST00000530563 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.49
TM9SF1-210ENST00000530563 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
TM9SF1-210ENST00000530563 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
TM9SF1-210ENST00000530563 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
TM9SF1-210ENST00000530563 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
TM9SF1-210ENST00000530563 MLECQ14165 292 aa18.11■□□□□ 0.49
TM9SF1-210ENST00000530563 PLCH2O75038 1416 aa18.1■□□□□ 0.49
TM9SF1-210ENST00000530563 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms