RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FAM69CQ0P6D2 419 aa20.3■□□□□ 0.84
SF3B2-208ENST00000529994 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.83
SF3B2-208ENST00000529994 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
SF3B2-208ENST00000529994 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
SF3B2-208ENST00000529994 ADCY10Q96PN6 1610 aa20.21■□□□□ 0.83
SF3B2-208ENST00000529994 DIP2BQ9P265 1576 aa20.21■□□□□ 0.83
SF3B2-208ENST00000529994 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
SF3B2-208ENST00000529994 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
SF3B2-208ENST00000529994 KDM6BO15054 1643 aa20.13■□□□□ 0.81
SF3B2-208ENST00000529994 KDM4FA0A1W2PPD8 638 aa20.11■□□□□ 0.81
SF3B2-208ENST00000529994 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
SF3B2-208ENST00000529994 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
SF3B2-208ENST00000529994 IGF1RP08069 1367 aa20.08■□□□□ 0.8
SF3B2-208ENST00000529994 CUL7Q14999 1698 aa20.03■□□□□ 0.8
SF3B2-208ENST00000529994 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
SF3B2-208ENST00000529994 PTPRGP23470 1445 aa20.02■□□□□ 0.79
SF3B2-208ENST00000529994 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
SF3B2-208ENST00000529994 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
SF3B2-208ENST00000529994 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
SF3B2-208ENST00000529994 ABCC2Q92887 1545 aa19.93■□□□□ 0.78
SF3B2-208ENST00000529994 PPRC1Q5VV67 1664 aaKnown RBP19.93■□□□□ 0.78
SF3B2-208ENST00000529994 CARMIL2Q6F5E8 1435 aa19.93■□□□□ 0.78
SF3B2-208ENST00000529994 IQGAP2Q13576 1575 aa19.89■□□□□ 0.77
SF3B2-208ENST00000529994 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
SF3B2-208ENST00000529994 ILDR1Q86SU0 546 aaPredicted RBP19.88■□□□□ 0.77
SF3B2-208ENST00000529994 GLI2P10070 1586 aa19.87■□□□□ 0.77
SF3B2-208ENST00000529994 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
SF3B2-208ENST00000529994 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
SF3B2-208ENST00000529994 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.76
SF3B2-208ENST00000529994 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
SF3B2-208ENST00000529994 COL17A1Q9UMD9 1497 aaPredicted RBP19.82■□□□□ 0.76
SF3B2-208ENST00000529994 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
SF3B2-208ENST00000529994 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
SF3B2-208ENST00000529994 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
SF3B2-208ENST00000529994 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
SF3B2-208ENST00000529994 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
SF3B2-208ENST00000529994 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
SF3B2-208ENST00000529994 KIAA0556O60303 1618 aa19.72■□□□□ 0.75
SF3B2-208ENST00000529994 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
SF3B2-208ENST00000529994 HECW2Q9P2P5 1572 aa19.7■□□□□ 0.74
SF3B2-208ENST00000529994 WDR7Q9Y4E6 1490 aa19.67■□□□□ 0.74
SF3B2-208ENST00000529994 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
SF3B2-208ENST00000529994 CTTNBP2Q8WZ74 1663 aa19.6■□□□□ 0.73
SF3B2-208ENST00000529994 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
SF3B2-208ENST00000529994 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
SF3B2-208ENST00000529994 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
SF3B2-208ENST00000529994 ABCA8O94911 1581 aa19.55■□□□□ 0.72
SF3B2-208ENST00000529994 KIF21BO75037 1637 aa19.54■□□□□ 0.72
SF3B2-208ENST00000529994 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
SF3B2-208ENST00000529994 ARID3CA6NKF2 412 aa19.52■□□□□ 0.72
SF3B2-208ENST00000529994 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
SF3B2-208ENST00000529994 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
SF3B2-208ENST00000529994 ATP10BO94823 1461 aa19.4■□□□□ 0.7
SF3B2-208ENST00000529994 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
SF3B2-208ENST00000529994 RAPGEF3O95398 923 aa19.37■□□□□ 0.69
SF3B2-208ENST00000529994 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
SF3B2-208ENST00000529994 ABCA9Q8IUA7 1624 aa19.36■□□□□ 0.69
SF3B2-208ENST00000529994 PTPRMP28827 1452 aa19.35■□□□□ 0.69
SF3B2-208ENST00000529994 ADAMTSL3P82987 1691 aa19.35■□□□□ 0.69
SF3B2-208ENST00000529994 FBXO41Q8TF61 875 aa19.34■□□□□ 0.69
SF3B2-208ENST00000529994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-208ENST00000529994 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
SF3B2-208ENST00000529994 ARID4BQ4LE39 1312 aaPredicted RBP19.31■□□□□ 0.68
SF3B2-208ENST00000529994 PHLDB1Q86UU1 1377 aa19.3■□□□□ 0.68
SF3B2-208ENST00000529994 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
SF3B2-208ENST00000529994 MADDQ8WXG6 1647 aa19.29■□□□□ 0.68
SF3B2-208ENST00000529994 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
SF3B2-208ENST00000529994 NEO1Q92859 1461 aa19.28■□□□□ 0.68
SF3B2-208ENST00000529994 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.68
SF3B2-208ENST00000529994 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.68
SF3B2-208ENST00000529994 SAMD9Q5K651 1589 aa19.27■□□□□ 0.67
SF3B2-208ENST00000529994 PCF11O94913 1555 aaKnown RBP19.23■□□□□ 0.67
SF3B2-208ENST00000529994 RIMS1Q86UR5 1692 aaKnown RBP19.22■□□□□ 0.67
SF3B2-208ENST00000529994 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
SF3B2-208ENST00000529994 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
SF3B2-208ENST00000529994 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
SF3B2-208ENST00000529994 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
SF3B2-208ENST00000529994 ARHGEF40Q8TER5 1519 aa19.18■□□□□ 0.66
SF3B2-208ENST00000529994 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
SF3B2-208ENST00000529994 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
SF3B2-208ENST00000529994 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-208ENST00000529994 HSPA2P54652 639 aa19.16■□□□□ 0.66
SF3B2-208ENST00000529994 PLEKHD1A6NEE1 506 aa19.15■□□□□ 0.66
SF3B2-208ENST00000529994 AKNAQ7Z591 1439 aa19.14■□□□□ 0.65
SF3B2-208ENST00000529994 FANCAO15360 1455 aa19.13■□□□□ 0.65
SF3B2-208ENST00000529994 SIGLEC1Q9BZZ2 1709 aa19.11■□□□□ 0.65
SF3B2-208ENST00000529994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.11■□□□□ 0.65
SF3B2-208ENST00000529994 TTC37Q6PGP7 1564 aa19.1■□□□□ 0.65
SF3B2-208ENST00000529994 MLECQ14165 292 aa19.1■□□□□ 0.65
SF3B2-208ENST00000529994 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
SF3B2-208ENST00000529994 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
SF3B2-208ENST00000529994 ZFYVE16Q7Z3T8 1539 aa19.07■□□□□ 0.64
SF3B2-208ENST00000529994 POGZQ7Z3K3 1410 aa19.07■□□□□ 0.64
SF3B2-208ENST00000529994 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
SF3B2-208ENST00000529994 EFCAB5A4FU69 1503 aa19.05■□□□□ 0.64
SF3B2-208ENST00000529994 FER1L4A9Z1Z3 1794 aa19.04■□□□□ 0.64
SF3B2-208ENST00000529994 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
SF3B2-208ENST00000529994 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
SF3B2-208ENST00000529994 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
SF3B2-208ENST00000529994 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms