RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
LRP5-206ENST00000529993 TMC1Q8TDI8 760 aa20.36■□□□□ 0.85
LRP5-206ENST00000529993 ANP32AP39687 249 aaKnown RBP20.34■□□□□ 0.85
LRP5-206ENST00000529993 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.851e-6■■■■■ 43.2
LRP5-206ENST00000529993 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
LRP5-206ENST00000529993 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
LRP5-206ENST00000529993 CCDC136Q96JN2 1154 aa20.24■□□□□ 0.83
LRP5-206ENST00000529993 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
LRP5-206ENST00000529993 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
LRP5-206ENST00000529993 WIZO95785 1651 aa20.22■□□□□ 0.83
LRP5-206ENST00000529993 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
LRP5-206ENST00000529993 NEFMP07197 916 aa20.21■□□□□ 0.83
LRP5-206ENST00000529993 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
LRP5-206ENST00000529993 CUX2O14529 1486 aa20.19■□□□□ 0.82
LRP5-206ENST00000529993 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
LRP5-206ENST00000529993 RGL3Q3MIN7 710 aa20.18■□□□□ 0.82
LRP5-206ENST00000529993 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
LRP5-206ENST00000529993 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
LRP5-206ENST00000529993 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
LRP5-206ENST00000529993 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
LRP5-206ENST00000529993 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
LRP5-206ENST00000529993 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
LRP5-206ENST00000529993 STAG3Q9UJ98 1225 aa20.11■□□□□ 0.81
LRP5-206ENST00000529993 WDR43Q15061 677 aaKnown RBP eCLIP20.09■□□□□ 0.81
LRP5-206ENST00000529993 NBR1Q14596 966 aa20.06■□□□□ 0.8
LRP5-206ENST00000529993 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
LRP5-206ENST00000529993 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
LRP5-206ENST00000529993 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
LRP5-206ENST00000529993 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.8
LRP5-206ENST00000529993 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
LRP5-206ENST00000529993 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.79
LRP5-206ENST00000529993 SETD5Q9C0A6 1442 aa19.98■□□□□ 0.79
LRP5-206ENST00000529993 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
LRP5-206ENST00000529993 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
LRP5-206ENST00000529993 FOXD1Q16676 465 aa19.95■□□□□ 0.78
LRP5-206ENST00000529993 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.95■□□□□ 0.78
LRP5-206ENST00000529993 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
LRP5-206ENST00000529993 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
LRP5-206ENST00000529993 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
LRP5-206ENST00000529993 UPF2Q9HAU5 1272 aaKnown RBP19.89■□□□□ 0.77
LRP5-206ENST00000529993 ARHGAP35Q9NRY4 1499 aa19.88■□□□□ 0.77
LRP5-206ENST00000529993 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
LRP5-206ENST00000529993 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
LRP5-206ENST00000529993 HSP90AA1P07900 732 aaKnown RBP19.85■□□□□ 0.77
LRP5-206ENST00000529993 DCAF11Q8TEB1 546 aa19.84■□□□□ 0.77
LRP5-206ENST00000529993 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.77
LRP5-206ENST00000529993 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
LRP5-206ENST00000529993 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
LRP5-206ENST00000529993 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
LRP5-206ENST00000529993 CC2D1BQ5T0F9 858 aaKnown RBP19.8■□□□□ 0.76
LRP5-206ENST00000529993 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
LRP5-206ENST00000529993 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
LRP5-206ENST00000529993 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
LRP5-206ENST00000529993 ARXQ96QS3 562 aa19.78■□□□□ 0.76
LRP5-206ENST00000529993 CCER2I3L3R5 266 aa19.77■□□□□ 0.76
LRP5-206ENST00000529993 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
LRP5-206ENST00000529993 NEUROD2Q15784 382 aa19.77■□□□□ 0.75
LRP5-206ENST00000529993 PKD2Q13563 968 aa19.76■□□□□ 0.75
LRP5-206ENST00000529993 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
LRP5-206ENST00000529993 ANP32EQ9BTT0 268 aa19.74■□□□□ 0.75
LRP5-206ENST00000529993 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
LRP5-206ENST00000529993 DHX57Q6P158 1386 aaKnown RBP19.73■□□□□ 0.75
LRP5-206ENST00000529993 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
LRP5-206ENST00000529993 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
LRP5-206ENST00000529993 FMN1Q68DA7 1419 aa19.71■□□□□ 0.75
LRP5-206ENST00000529993 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
LRP5-206ENST00000529993 PPM1GO15355 546 aaPredicted RBP19.67■□□□□ 0.74
LRP5-206ENST00000529993 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
LRP5-206ENST00000529993 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
LRP5-206ENST00000529993 PDS5BQ9NTI5 1447 aa19.64■□□□□ 0.73
LRP5-206ENST00000529993 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
LRP5-206ENST00000529993 RGS3P49796 1198 aa19.62■□□□□ 0.73
LRP5-206ENST00000529993 TMF1P82094 1093 aa19.61■□□□□ 0.73
LRP5-206ENST00000529993 RBM19Q9Y4C8 960 aaKnown RBP19.6■□□□□ 0.73
LRP5-206ENST00000529993 FRAT1Q92837 279 aaPredicted RBP19.6■□□□□ 0.73
LRP5-206ENST00000529993 NUP155O75694 1391 aa19.59■□□□□ 0.73
LRP5-206ENST00000529993 ANP32BQ92688 251 aaKnown RBP19.57■□□□□ 0.72
LRP5-206ENST00000529993 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
LRP5-206ENST00000529993 DDRGK1Q96HY6 314 aa19.56■□□□□ 0.72
LRP5-206ENST00000529993 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
LRP5-206ENST00000529993 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
LRP5-206ENST00000529993 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
LRP5-206ENST00000529993 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.725e-7■■■■□ 24.1
LRP5-206ENST00000529993 FTSJ3Q8IY81 847 aaKnown RBP19.52■□□□□ 0.72
LRP5-206ENST00000529993 POGKQ9P215 609 aa19.52■□□□□ 0.72
LRP5-206ENST00000529993 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
LRP5-206ENST00000529993 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
LRP5-206ENST00000529993 SAFB2Q14151 953 aaKnown RBP eCLIP19.51■□□□□ 0.71
LRP5-206ENST00000529993 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
LRP5-206ENST00000529993 IGF1RP08069 1367 aa19.5■□□□□ 0.71
LRP5-206ENST00000529993 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
LRP5-206ENST00000529993 BECN1Q14457 450 aa19.49■□□□□ 0.71
LRP5-206ENST00000529993 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
LRP5-206ENST00000529993 MAPK8IP3Q9UPT6 1336 aa19.48■□□□□ 0.71
LRP5-206ENST00000529993 ROCK2O75116 1388 aaKnown RBP19.48■□□□□ 0.71
LRP5-206ENST00000529993 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
LRP5-206ENST00000529993 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
LRP5-206ENST00000529993 GGT6Q6P531 493 aa19.47■□□□□ 0.71
LRP5-206ENST00000529993 NUDCQ9Y266 331 aa19.45■□□□□ 0.7
LRP5-206ENST00000529993 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms