RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
PDZD3-211ENST00000529573 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
PDZD3-211ENST00000529573 MAPKBP1O60336 1514 aa17.63■□□□□ 0.41
PDZD3-211ENST00000529573 FAM69CQ0P6D2 419 aa17.61■□□□□ 0.41
PDZD3-211ENST00000529573 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
PDZD3-211ENST00000529573 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
PDZD3-211ENST00000529573 KIAA0586Q9BVV6 1533 aa17.6■□□□□ 0.41
PDZD3-211ENST00000529573 DIP2BQ9P265 1576 aa17.59■□□□□ 0.41
PDZD3-211ENST00000529573 IGF1RP08069 1367 aa17.59■□□□□ 0.41
PDZD3-211ENST00000529573 CUL7Q14999 1698 aa17.55■□□□□ 0.4
PDZD3-211ENST00000529573 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
PDZD3-211ENST00000529573 KDM6BO15054 1643 aa17.47■□□□□ 0.39
PDZD3-211ENST00000529573 PTPRGP23470 1445 aa17.47■□□□□ 0.39
PDZD3-211ENST00000529573 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
PDZD3-211ENST00000529573 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
PDZD3-211ENST00000529573 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
PDZD3-211ENST00000529573 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
PDZD3-211ENST00000529573 TNIKQ9UKE5 1360 aa17.41■□□□□ 0.38
PDZD3-211ENST00000529573 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
PDZD3-211ENST00000529573 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
PDZD3-211ENST00000529573 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
PDZD3-211ENST00000529573 UHRF1BP1LA0JNW5 1464 aa17.37■□□□□ 0.37
PDZD3-211ENST00000529573 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
PDZD3-211ENST00000529573 GLI2P10070 1586 aa17.36■□□□□ 0.37
PDZD3-211ENST00000529573 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
PDZD3-211ENST00000529573 PPRC1Q5VV67 1664 aaKnown RBP17.34■□□□□ 0.37
PDZD3-211ENST00000529573 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
PDZD3-211ENST00000529573 UACAQ9BZF9 1416 aa17.33■□□□□ 0.36
PDZD3-211ENST00000529573 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
PDZD3-211ENST00000529573 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
PDZD3-211ENST00000529573 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
PDZD3-211ENST00000529573 RAPGEF2Q9Y4G8 1499 aa17.26■□□□□ 0.35
PDZD3-211ENST00000529573 COL17A1Q9UMD9 1497 aaPredicted RBP17.25■□□□□ 0.35
PDZD3-211ENST00000529573 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
PDZD3-211ENST00000529573 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
PDZD3-211ENST00000529573 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
PDZD3-211ENST00000529573 ADGRL1O94910 1474 aa17.22■□□□□ 0.35
PDZD3-211ENST00000529573 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
PDZD3-211ENST00000529573 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
PDZD3-211ENST00000529573 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
PDZD3-211ENST00000529573 ABCA8O94911 1581 aa17.11■□□□□ 0.33
PDZD3-211ENST00000529573 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
PDZD3-211ENST00000529573 GOLGA3Q08378 1498 aa17.1■□□□□ 0.33
PDZD3-211ENST00000529573 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
PDZD3-211ENST00000529573 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
PDZD3-211ENST00000529573 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
PDZD3-211ENST00000529573 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
PDZD3-211ENST00000529573 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
PDZD3-211ENST00000529573 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
PDZD3-211ENST00000529573 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
PDZD3-211ENST00000529573 ATP10BO94823 1461 aa16.96■□□□□ 0.31
PDZD3-211ENST00000529573 KIF21BO75037 1637 aa16.94■□□□□ 0.3
PDZD3-211ENST00000529573 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
PDZD3-211ENST00000529573 PHLDB1Q86UU1 1377 aa16.9■□□□□ 0.3
PDZD3-211ENST00000529573 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
PDZD3-211ENST00000529573 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
PDZD3-211ENST00000529573 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
PDZD3-211ENST00000529573 SAMD9Q5K651 1589 aa16.89■□□□□ 0.29
PDZD3-211ENST00000529573 NEO1Q92859 1461 aa16.85■□□□□ 0.29
PDZD3-211ENST00000529573 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
PDZD3-211ENST00000529573 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
PDZD3-211ENST00000529573 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
PDZD3-211ENST00000529573 PTPRMP28827 1452 aa16.83■□□□□ 0.28
PDZD3-211ENST00000529573 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
PDZD3-211ENST00000529573 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
PDZD3-211ENST00000529573 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
PDZD3-211ENST00000529573 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
PDZD3-211ENST00000529573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
PDZD3-211ENST00000529573 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
PDZD3-211ENST00000529573 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
PDZD3-211ENST00000529573 FBXO41Q8TF61 875 aa16.74■□□□□ 0.27
PDZD3-211ENST00000529573 MADDQ8WXG6 1647 aa16.74■□□□□ 0.27
PDZD3-211ENST00000529573 EEA1Q15075 1411 aa16.73■□□□□ 0.27
PDZD3-211ENST00000529573 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
PDZD3-211ENST00000529573 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
PDZD3-211ENST00000529573 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
PDZD3-211ENST00000529573 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
PDZD3-211ENST00000529573 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.27
PDZD3-211ENST00000529573 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
PDZD3-211ENST00000529573 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
PDZD3-211ENST00000529573 LMTK3Q96Q04 1460 aa16.7■□□□□ 0.26
PDZD3-211ENST00000529573 FANCAO15360 1455 aa16.69■□□□□ 0.26
PDZD3-211ENST00000529573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDZD3-211ENST00000529573 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
PDZD3-211ENST00000529573 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
PDZD3-211ENST00000529573 EFCAB5A4FU69 1503 aa16.67■□□□□ 0.26
PDZD3-211ENST00000529573 ZMYM4Q5VZL5 1548 aa16.67■□□□□ 0.26
PDZD3-211ENST00000529573 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
PDZD3-211ENST00000529573 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
PDZD3-211ENST00000529573 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
PDZD3-211ENST00000529573 POGZQ7Z3K3 1410 aa16.62■□□□□ 0.25
PDZD3-211ENST00000529573 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
PDZD3-211ENST00000529573 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
PDZD3-211ENST00000529573 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
PDZD3-211ENST00000529573 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
PDZD3-211ENST00000529573 PLCH2O75038 1416 aa16.59■□□□□ 0.25
PDZD3-211ENST00000529573 HECW1Q76N89 1606 aa16.59■□□□□ 0.25
PDZD3-211ENST00000529573 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
PDZD3-211ENST00000529573 HSPA2P54652 639 aa16.56■□□□□ 0.24
PDZD3-211ENST00000529573 FER1L4A9Z1Z3 1794 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms