RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
RPS3-212ENST00000529173 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
RPS3-212ENST00000529173 ADAMTS12P58397 1594 aa20.19■□□□□ 0.82
RPS3-212ENST00000529173 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■■■□ 25.7
RPS3-212ENST00000529173 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
RPS3-212ENST00000529173 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
RPS3-212ENST00000529173 FYCO1Q9BQS8 1478 aa20.13■□□□□ 0.81
RPS3-212ENST00000529173 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
RPS3-212ENST00000529173 SAMD9Q5K651 1589 aa20.12■□□□□ 0.81
RPS3-212ENST00000529173 CFAP43Q8NDM7 1665 aa20.12■□□□□ 0.81
RPS3-212ENST00000529173 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
RPS3-212ENST00000529173 PCF11O94913 1555 aaKnown RBP20.08■□□□□ 0.81
RPS3-212ENST00000529173 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
RPS3-212ENST00000529173 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
RPS3-212ENST00000529173 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
RPS3-212ENST00000529173 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
RPS3-212ENST00000529173 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
RPS3-212ENST00000529173 FHOD3Q2V2M9 1422 aa20.03■□□□□ 0.8
RPS3-212ENST00000529173 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
RPS3-212ENST00000529173 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
RPS3-212ENST00000529173 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
RPS3-212ENST00000529173 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
RPS3-212ENST00000529173 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
RPS3-212ENST00000529173 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
RPS3-212ENST00000529173 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
RPS3-212ENST00000529173 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
RPS3-212ENST00000529173 KIAA0586Q9BVV6 1533 aa19.93■□□□□ 0.78
RPS3-212ENST00000529173 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
RPS3-212ENST00000529173 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
RPS3-212ENST00000529173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
RPS3-212ENST00000529173 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
RPS3-212ENST00000529173 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
RPS3-212ENST00000529173 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
RPS3-212ENST00000529173 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
RPS3-212ENST00000529173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.77
RPS3-212ENST00000529173 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
RPS3-212ENST00000529173 CLSPNQ9HAW4 1339 aa19.82■□□□□ 0.76
RPS3-212ENST00000529173 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
RPS3-212ENST00000529173 MTUS2Q5JR59 1369 aa19.8■□□□□ 0.76
RPS3-212ENST00000529173 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
RPS3-212ENST00000529173 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
RPS3-212ENST00000529173 NUP160Q12769 1436 aa19.77■□□□□ 0.76
RPS3-212ENST00000529173 PHLDB1Q86UU1 1377 aa19.75■□□□□ 0.75
RPS3-212ENST00000529173 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
RPS3-212ENST00000529173 LRRIQ1Q96JM4 1722 aa19.74■□□□□ 0.75
RPS3-212ENST00000529173 DISP1Q96F81 1524 aa19.73■□□□□ 0.75
RPS3-212ENST00000529173 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
RPS3-212ENST00000529173 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
RPS3-212ENST00000529173 FGD6Q6ZV73 1430 aa19.69■□□□□ 0.74
RPS3-212ENST00000529173 RAPGEF6Q8TEU7 1601 aa19.68■□□□□ 0.74
RPS3-212ENST00000529173 NCOA2Q15596 1464 aa19.68■□□□□ 0.74
RPS3-212ENST00000529173 MYOM3Q5VTT5 1437 aa19.66■□□□□ 0.74
RPS3-212ENST00000529173 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
RPS3-212ENST00000529173 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
RPS3-212ENST00000529173 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
RPS3-212ENST00000529173 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
RPS3-212ENST00000529173 DHX57Q6P158 1386 aaKnown RBP19.6■□□□□ 0.73
RPS3-212ENST00000529173 FBLN2P98095 1184 aa19.59■□□□□ 0.73
RPS3-212ENST00000529173 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
RPS3-212ENST00000529173 NUP153P49790 1475 aaKnown RBP19.57■□□□□ 0.72
RPS3-212ENST00000529173 TCOF1Q13428 1488 aaKnown RBP19.57■□□□□ 0.72
RPS3-212ENST00000529173 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
RPS3-212ENST00000529173 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
RPS3-212ENST00000529173 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
RPS3-212ENST00000529173 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
RPS3-212ENST00000529173 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
RPS3-212ENST00000529173 CHD1O14646 1710 aa19.53■□□□□ 0.72
RPS3-212ENST00000529173 ITGAEP38570 1179 aa19.53■□□□□ 0.72
RPS3-212ENST00000529173 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
RPS3-212ENST00000529173 AKNAQ7Z591 1439 aa19.5■□□□□ 0.71
RPS3-212ENST00000529173 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
RPS3-212ENST00000529173 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
RPS3-212ENST00000529173 ABCA8O94911 1581 aa19.49■□□□□ 0.71
RPS3-212ENST00000529173 ITSN2Q9NZM3 1697 aa19.48■□□□□ 0.71
RPS3-212ENST00000529173 HFM1A2PYH4 1435 aa19.48■□□□□ 0.71
RPS3-212ENST00000529173 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
RPS3-212ENST00000529173 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
RPS3-212ENST00000529173 PLB1Q6P1J6 1458 aa19.44■□□□□ 0.7
RPS3-212ENST00000529173 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
RPS3-212ENST00000529173 GCC2Q8IWJ2 1684 aa19.41■□□□□ 0.7
RPS3-212ENST00000529173 KIF14Q15058 1648 aa19.39■□□□□ 0.69
RPS3-212ENST00000529173 PTPRGP23470 1445 aa19.38■□□□□ 0.69
RPS3-212ENST00000529173 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
RPS3-212ENST00000529173 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
RPS3-212ENST00000529173 DNMT1P26358 1616 aaKnown RBP19.36■□□□□ 0.69
RPS3-212ENST00000529173 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
RPS3-212ENST00000529173 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
RPS3-212ENST00000529173 NAIPQ13075 1403 aa19.35■□□□□ 0.69
RPS3-212ENST00000529173 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
RPS3-212ENST00000529173 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
RPS3-212ENST00000529173 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
RPS3-212ENST00000529173 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
RPS3-212ENST00000529173 ATP10BO94823 1461 aa19.3■□□□□ 0.68
RPS3-212ENST00000529173 DAPK1P53355 1430 aa19.3■□□□□ 0.68
RPS3-212ENST00000529173 ARID3CA6NKF2 412 aa19.29■□□□□ 0.68
RPS3-212ENST00000529173 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.68
RPS3-212ENST00000529173 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.68
RPS3-212ENST00000529173 ABCC2Q92887 1545 aa19.27■□□□□ 0.67
RPS3-212ENST00000529173 ADGBQ8N7X0 1667 aa19.26■□□□□ 0.67
RPS3-212ENST00000529173 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms